RNA–Protein interactions for RNA: ENST00000591762.1

SPHK1-209, Transcript of sphingosine kinase 1, humanhuman

TSL 2

Gene SPHK1, Length 2,502 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-209ENST00000591762 CABP2Q9NPB3 220 aa23.33■■□□□ 1.33
SPHK1-209ENST00000591762 CLTCQ00610 1675 aaKnown RBP23.33■■□□□ 1.32
SPHK1-209ENST00000591762 PPP6R1Q9UPN7 881 aa23.32■■□□□ 1.32
SPHK1-209ENST00000591762 BLMP54132 1417 aaPredicted RBP23.32■■□□□ 1.32
SPHK1-209ENST00000591762 ZFYVE9O95405 1425 aa23.32■■□□□ 1.32
SPHK1-209ENST00000591762 TNNT2P45379 298 aaPredicted RBP23.31■■□□□ 1.32
SPHK1-209ENST00000591762 ANO8Q9HCE9 1232 aaPredicted RBP23.31■■□□□ 1.32
SPHK1-209ENST00000591762 EVC2Q86UK5 1308 aa23.31■■□□□ 1.32
SPHK1-209ENST00000591762 REREQ9P2R6 1566 aa23.31■■□□□ 1.32
SPHK1-209ENST00000591762 NSD3Q9BZ95 1437 aa23.3■■□□□ 1.32
SPHK1-209ENST00000591762 ESF1Q9H501 851 aaKnown RBP23.29■■□□□ 1.32
SPHK1-209ENST00000591762 PLIN1O60240 522 aa23.28■■□□□ 1.32
SPHK1-209ENST00000591762 PDE3BQ13370 1112 aa23.28■■□□□ 1.32
SPHK1-209ENST00000591762 RTL5Q5HYW3 569 aaPredicted RBP23.28■■□□□ 1.32
SPHK1-209ENST00000591762 PRAM1Q96QH2 718 aa23.27■■□□□ 1.32
SPHK1-209ENST00000591762 ARHGEF28Q8N1W1 1705 aaKnown RBP23.27■■□□□ 1.32
SPHK1-209ENST00000591762 TCERG1O14776 1098 aaKnown RBP23.27■■□□□ 1.32
SPHK1-209ENST00000591762 MINK1Q8N4C8 1332 aaPredicted RBP23.26■■□□□ 1.31
SPHK1-209ENST00000591762 CCDC146Q8IYE0 955 aa23.26■■□□□ 1.31
SPHK1-209ENST00000591762 POGKQ9P215 609 aa23.26■■□□□ 1.31
SPHK1-209ENST00000591762 PDE4AP27815 886 aa23.25■■□□□ 1.31
SPHK1-209ENST00000591762 SRPK2P78362 688 aaKnown RBP23.25■■□□□ 1.31
SPHK1-209ENST00000591762 MORC1Q86VD1 984 aa23.25■■□□□ 1.31
SPHK1-209ENST00000591762 TULP4Q9NRJ4 1543 aa23.25■■□□□ 1.31
SPHK1-209ENST00000591762 INSRP06213 1382 aa23.25■■□□□ 1.31
SPHK1-209ENST00000591762 ARHGEF40Q8TER5 1519 aa23.24■■□□□ 1.31
SPHK1-209ENST00000591762 ZMYM3Q14202 1370 aa23.22■■□□□ 1.31
SPHK1-209ENST00000591762 YTHDC2Q9H6S0 1430 aaKnown RBP23.22■■□□□ 1.31
SPHK1-209ENST00000591762 SKAP1Q86WV1 359 aa23.21■■□□□ 1.31
SPHK1-209ENST00000591762 A2ML1A8K2U0 1454 aa23.21■■□□□ 1.31
SPHK1-209ENST00000591762 PLEKHH1Q9ULM0 1364 aa23.2■■□□□ 1.3
SPHK1-209ENST00000591762 SPATA31D1Q6ZQQ2 1576 aa23.19■■□□□ 1.3
SPHK1-209ENST00000591762 ALKQ9UM73 1620 aa23.19■■□□□ 1.3
SPHK1-209ENST00000591762 BACH2Q9BYV9 841 aa23.19■■□□□ 1.3
SPHK1-209ENST00000591762 PTPRMP28827 1452 aa23.19■■□□□ 1.3
SPHK1-209ENST00000591762 RIMS2Q9UQ26 1411 aa23.18■■□□□ 1.3
SPHK1-209ENST00000591762 CGNL1Q0VF96 1302 aa23.18■■□□□ 1.3
SPHK1-209ENST00000591762 CRBNQ96SW2 442 aa23.18■■□□□ 1.3
SPHK1-209ENST00000591762 PUS7Q96PZ0 661 aaKnown RBP23.17■■□□□ 1.3
SPHK1-209ENST00000591762 LAS1LQ9Y4W2 734 aaKnown RBP23.17■■□□□ 1.3
SPHK1-209ENST00000591762 APAF1O14727 1248 aa23.16■■□□□ 1.3
SPHK1-209ENST00000591762 WAPLQ7Z5K2 1190 aa23.16■■□□□ 1.3
SPHK1-209ENST00000591762 ANKRD36BQ8N2N9 1353 aa23.15■■□□□ 1.3
SPHK1-209ENST00000591762 MS4A1P11836 297 aa23.14■■□□□ 1.3
SPHK1-209ENST00000591762 CDK19Q9BWU1 502 aa23.13■■□□□ 1.29
SPHK1-209ENST00000591762 MTHFSP49914 203 aa23.12■■□□□ 1.29
SPHK1-209ENST00000591762 PLPPR3Q6T4P5 718 aa23.12■■□□□ 1.29
SPHK1-209ENST00000591762 A0A1W2PP64 1363 aa23.12■■□□□ 1.29
SPHK1-209ENST00000591762 C20orf194Q5TEA3 1177 aa23.11■■□□□ 1.29
SPHK1-209ENST00000591762 POLR3AO14802 1390 aaPredicted RBP23.1■■□□□ 1.29
SPHK1-209ENST00000591762 GOLGA2Q08379 1002 aa23.1■■□□□ 1.29
SPHK1-209ENST00000591762 ZNF521Q96K83 1311 aa23.09■■□□□ 1.29
SPHK1-209ENST00000591762 GGNBP2Q9H3C7 697 aa23.09■■□□□ 1.29
SPHK1-209ENST00000591762 CEBPAP49715 358 aaPredicted RBP23.09■■□□□ 1.29
SPHK1-209ENST00000591762 DUSP27Q5VZP5 1158 aa23.08■■□□□ 1.28
SPHK1-209ENST00000591762 CABP1Q9NZU7 370 aa23.08■■□□□ 1.28
SPHK1-209ENST00000591762 NEFMP07197 916 aa23.07■■□□□ 1.28
SPHK1-209ENST00000591762 TNRQ92752 1358 aa23.07■■□□□ 1.28
SPHK1-209ENST00000591762 SPINK5Q9NQ38 1064 aaPredicted RBP23.06■■□□□ 1.28
SPHK1-209ENST00000591762 ATAD2Q6PL18 1390 aa23.06■■□□□ 1.28
SPHK1-209ENST00000591762 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.06■■□□□ 1.28
SPHK1-209ENST00000591762 METP08581 1390 aa23.06■■□□□ 1.28
SPHK1-209ENST00000591762 TXNDC2Q86VQ3 553 aa23.05■■□□□ 1.28
SPHK1-209ENST00000591762 TERF2IPQ9NYB0 399 aa23.05■■□□□ 1.28
SPHK1-209ENST00000591762 NEUROD2Q15784 382 aa23.04■■□□□ 1.28
SPHK1-209ENST00000591762 TRHP20396 242 aaPredicted RBP23.03■■□□□ 1.28
SPHK1-209ENST00000591762 SLFN5Q08AF3 891 aa23.03■■□□□ 1.28
SPHK1-209ENST00000591762 DMRT2Q9Y5R5 561 aa23.03■■□□□ 1.28
SPHK1-209ENST00000591762 USP32Q8NFA0 1604 aa23.02■■□□□ 1.28
SPHK1-209ENST00000591762 FYB1O15117 783 aa23.02■■□□□ 1.28
SPHK1-209ENST00000591762 RRP7AQ9Y3A4 280 aaKnown RBP23.02■■□□□ 1.28
SPHK1-209ENST00000591762 ABCC11Q96J66 1382 aa23.02■■□□□ 1.28
SPHK1-209ENST00000591762 NINLQ9Y2I6 1382 aa23.02■■□□□ 1.28
SPHK1-209ENST00000591762 CFAP53Q96M91 514 aa23.02■■□□□ 1.27
SPHK1-209ENST00000591762 HDGFL2Q7Z4V5 671 aaPredicted RBP23.01■■□□□ 1.27
SPHK1-209ENST00000591762 NSD2O96028 1365 aa23■■□□□ 1.27
SPHK1-209ENST00000591762 CD163L1Q9NR16 1453 aa23■■□□□ 1.27
SPHK1-209ENST00000591762 HDGFP51858 240 aaKnown RBP23■■□□□ 1.27
SPHK1-209ENST00000591762 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.98■■□□□ 1.27
SPHK1-209ENST00000591762 SETD1AO15047 1707 aaKnown RBP22.98■■□□□ 1.27
SPHK1-209ENST00000591762 NRXN3Q9Y4C0 1643 aa22.98■■□□□ 1.27
SPHK1-209ENST00000591762 TMEM2Q9UHN6 1383 aa22.97■■□□□ 1.27
SPHK1-209ENST00000591762 SHPRHQ149N8 1683 aa22.97■■□□□ 1.27
SPHK1-209ENST00000591762 RUNDC1Q96C34 613 aa22.97■■□□□ 1.27
SPHK1-209ENST00000591762 U2AF1L5P0DN76 240 aaPredicted RBP22.96■■□□□ 1.27
SPHK1-209ENST00000591762 U2AF1Q01081 240 aaKnown RBP eCLIP22.96■■□□□ 1.27
SPHK1-209ENST00000591762 TCP11L2Q8N4U5 519 aa22.96■■□□□ 1.27
SPHK1-209ENST00000591762 KDM2BQ8NHM5 1336 aa22.96■■□□□ 1.27
SPHK1-209ENST00000591762 WWC1Q8IX03 1113 aa22.96■■□□□ 1.27
SPHK1-209ENST00000591762 TRMT2AQ8IZ69 625 aaKnown RBP22.96■■□□□ 1.27
SPHK1-209ENST00000591762 LTKP29376 864 aa22.95■■□□□ 1.26
SPHK1-209ENST00000591762 DLC1Q96QB1 1528 aa22.95■■□□□ 1.26
SPHK1-209ENST00000591762 NCKAP5LQ9HCH0 1330 aa22.94■■□□□ 1.26
SPHK1-209ENST00000591762 WASLO00401 505 aaPredicted RBP22.93■■□□□ 1.26
SPHK1-209ENST00000591762 PPM1GO15355 546 aaPredicted RBP22.93■■□□□ 1.26
SPHK1-209ENST00000591762 FBLN1P23142 703 aa22.93■■□□□ 1.26
SPHK1-209ENST00000591762 SLC4A3P48751 1232 aa22.93■■□□□ 1.26
SPHK1-209ENST00000591762 DDRGK1Q96HY6 314 aa22.93■■□□□ 1.26
SPHK1-209ENST00000591762 USP35Q9P2H5 1018 aa22.93■■□□□ 1.26
SPHK1-209ENST00000591762 E9PSI1 815 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms