RNA–Protein interactions for RNA: ENST00000590901.5

CXXC1-214, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 2,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-214ENST00000590901 NLRP13Q86W25 1043 aa20.54■□□□□ 0.88
CXXC1-214ENST00000590901 BRD4O60885 1362 aaPredicted RBP20.54■□□□□ 0.88
CXXC1-214ENST00000590901 ARHGEF28Q8N1W1 1705 aaKnown RBP20.53■□□□□ 0.88
CXXC1-214ENST00000590901 CDCA8Q53HL2 280 aa20.52■□□□□ 0.88
CXXC1-214ENST00000590901 ZFYVE9O95405 1425 aa20.52■□□□□ 0.88
CXXC1-214ENST00000590901 LRPPRCP42704 1394 aaKnown RBP20.51■□□□□ 0.87
CXXC1-214ENST00000590901 PRAM1Q96QH2 718 aa20.51■□□□□ 0.87
CXXC1-214ENST00000590901 USP35Q9P2H5 1018 aa20.51■□□□□ 0.87
CXXC1-214ENST00000590901 MINK1Q8N4C8 1332 aaPredicted RBP20.51■□□□□ 0.87
CXXC1-214ENST00000590901 PPP2R1AP30153 589 aa20.5■□□□□ 0.87
CXXC1-214ENST00000590901 WAPLQ7Z5K2 1190 aa20.5■□□□□ 0.87
CXXC1-214ENST00000590901 PTPRMP28827 1452 aa20.5■□□□□ 0.87
CXXC1-214ENST00000590901 TULP4Q9NRJ4 1543 aa20.5■□□□□ 0.87
CXXC1-214ENST00000590901 SBNO2Q9Y2G9 1366 aa20.5■□□□□ 0.87
CXXC1-214ENST00000590901 RIMS2Q9UQ26 1411 aa20.49■□□□□ 0.87
CXXC1-214ENST00000590901 ALKQ9UM73 1620 aa20.49■□□□□ 0.87
CXXC1-214ENST00000590901 TCERG1O14776 1098 aaKnown RBP20.48■□□□□ 0.87
CXXC1-214ENST00000590901 NPM2Q86SE8 214 aaKnown RBP20.48■□□□□ 0.87
CXXC1-214ENST00000590901 NEFMP07197 916 aa20.47■□□□□ 0.87
CXXC1-214ENST00000590901 PLEKHH1Q9ULM0 1364 aa20.47■□□□□ 0.87
CXXC1-214ENST00000590901 YTHDC2Q9H6S0 1430 aaKnown RBP20.47■□□□□ 0.87
CXXC1-214ENST00000590901 TNNT2P45379 298 aaPredicted RBP20.46■□□□□ 0.87
CXXC1-214ENST00000590901 RTN4Q9NQC3 1192 aaKnown RBP20.46■□□□□ 0.87
CXXC1-214ENST00000590901 LAS1LQ9Y4W2 734 aaKnown RBP20.45■□□□□ 0.86
CXXC1-214ENST00000590901 METP08581 1390 aa20.45■□□□□ 0.86
CXXC1-214ENST00000590901 TNRQ92752 1358 aa20.45■□□□□ 0.86
CXXC1-214ENST00000590901 ADAMTS8Q9UP79 889 aa20.44■□□□□ 0.86
CXXC1-214ENST00000590901 PPM1GO15355 546 aaPredicted RBP20.42■□□□□ 0.86
CXXC1-214ENST00000590901 LTKP29376 864 aa20.42■□□□□ 0.86
CXXC1-214ENST00000590901 POGKQ9P215 609 aa20.42■□□□□ 0.86
CXXC1-214ENST00000590901 PDE4AP27815 886 aa20.42■□□□□ 0.86
CXXC1-214ENST00000590901 NSD3Q9BZ95 1437 aa20.41■□□□□ 0.86
CXXC1-214ENST00000590901 SRPK2P78362 688 aaKnown RBP20.41■□□□□ 0.86
CXXC1-214ENST00000590901 NRXN3Q9Y4C0 1643 aa20.41■□□□□ 0.86
CXXC1-214ENST00000590901 RRP1P56182 461 aaKnown RBP20.4■□□□□ 0.86
CXXC1-214ENST00000590901 TXNDC2Q86VQ3 553 aa20.4■□□□□ 0.86
CXXC1-214ENST00000590901 EVC2Q86UK5 1308 aa20.4■□□□□ 0.86
CXXC1-214ENST00000590901 MS4A1P11836 297 aa20.39■□□□□ 0.85
CXXC1-214ENST00000590901 SETD1AO15047 1707 aaKnown RBP20.39■□□□□ 0.85
CXXC1-214ENST00000590901 BACH2Q9BYV9 841 aa20.39■□□□□ 0.85
CXXC1-214ENST00000590901 CDCA7LQ96GN5 454 aa20.38■□□□□ 0.85
CXXC1-214ENST00000590901 EXOC6Q8TAG9 804 aa20.38■□□□□ 0.85
CXXC1-214ENST00000590901 NCKAP5LQ9HCH0 1330 aa20.37■□□□□ 0.85
CXXC1-214ENST00000590901 CDK19Q9BWU1 502 aa20.36■□□□□ 0.85
CXXC1-214ENST00000590901 UBR1Q8IWV7 1749 aa20.35■□□□□ 0.85
CXXC1-214ENST00000590901 SLC26A8Q96RN1 970 aa20.35■□□□□ 0.85
CXXC1-214ENST00000590901 TMEM2Q9UHN6 1383 aa20.35■□□□□ 0.85
CXXC1-214ENST00000590901 C3P01024 1663 aa20.34■□□□□ 0.85
CXXC1-214ENST00000590901 CCDC146Q8IYE0 955 aa20.34■□□□□ 0.85
CXXC1-214ENST00000590901 SLC24A1O60721 1099 aa20.34■□□□□ 0.85
CXXC1-214ENST00000590901 A0A1W2PP64 1363 aa20.33■□□□□ 0.84
CXXC1-214ENST00000590901 NPC1L1Q9UHC9 1359 aa20.33■□□□□ 0.84
CXXC1-214ENST00000590901 DNAJC5Q9H3Z4 198 aa20.33■□□□□ 0.84
CXXC1-214ENST00000590901 CABP1Q9NZU7 370 aa20.32■□□□□ 0.84
CXXC1-214ENST00000590901 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.32■□□□□ 0.84
CXXC1-214ENST00000590901 RCAN3Q9UKA8 241 aa20.32■□□□□ 0.84
CXXC1-214ENST00000590901 FBLN1P23142 703 aa20.31■□□□□ 0.84
CXXC1-214ENST00000590901 DDRGK1Q96HY6 314 aa20.3■□□□□ 0.84
CXXC1-214ENST00000590901 GGNBP2Q9H3C7 697 aa20.3■□□□□ 0.84
CXXC1-214ENST00000590901 CD163L1Q9NR16 1453 aa20.3■□□□□ 0.84
CXXC1-214ENST00000590901 MORC1Q86VD1 984 aa20.3■□□□□ 0.84
CXXC1-214ENST00000590901 FER1L4A9Z1Z3 1794 aa20.29■□□□□ 0.84
CXXC1-214ENST00000590901 ADAMTS13Q76LX8 1427 aa20.28■□□□□ 0.84
CXXC1-214ENST00000590901 BLMP54132 1417 aaPredicted RBP20.28■□□□□ 0.84
CXXC1-214ENST00000590901 ANKRD36BQ8N2N9 1353 aa20.28■□□□□ 0.84
CXXC1-214ENST00000590901 NUTM2FA1L443 756 aa20.27■□□□□ 0.83
CXXC1-214ENST00000590901 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.27■□□□□ 0.83
CXXC1-214ENST00000590901 ABCC11Q96J66 1382 aa20.27■□□□□ 0.83
CXXC1-214ENST00000590901 ROBO2Q9HCK4 1378 aa20.26■□□□□ 0.83
CXXC1-214ENST00000590901 GSE1Q14687 1217 aa20.25■□□□□ 0.83
CXXC1-214ENST00000590901 WDR43Q15061 677 aaKnown RBP eCLIP20.25■□□□□ 0.832e-7■■■■□ 19.5
CXXC1-214ENST00000590901 MTHFSP49914 203 aa20.25■□□□□ 0.83
CXXC1-214ENST00000590901 BRPF3Q9ULD4 1205 aa20.24■□□□□ 0.83
CXXC1-214ENST00000590901 CGNL1Q0VF96 1302 aa20.24■□□□□ 0.83
CXXC1-214ENST00000590901 FYB1O15117 783 aa20.23■□□□□ 0.83
CXXC1-214ENST00000590901 PDE3BQ13370 1112 aa20.23■□□□□ 0.83
CXXC1-214ENST00000590901 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.23■□□□□ 0.83
CXXC1-214ENST00000590901 PTPRUQ92729 1446 aa20.22■□□□□ 0.83
CXXC1-214ENST00000590901 PUS7Q96PZ0 661 aaKnown RBP20.22■□□□□ 0.83
CXXC1-214ENST00000590901 ZRANB1Q9UGI0 708 aa20.22■□□□□ 0.83
CXXC1-214ENST00000590901 DMRT2Q9Y5R5 561 aa20.22■□□□□ 0.83
CXXC1-214ENST00000590901 APAF1O14727 1248 aa20.21■□□□□ 0.83
CXXC1-214ENST00000590901 WASLO00401 505 aaPredicted RBP20.2■□□□□ 0.82
CXXC1-214ENST00000590901 SPINK5Q9NQ38 1064 aaPredicted RBP20.2■□□□□ 0.82
CXXC1-214ENST00000590901 PRR36Q9H6K5 1346 aa20.19■□□□□ 0.82
CXXC1-214ENST00000590901 NLRP1Q9C000 1473 aa20.19■□□□□ 0.82
CXXC1-214ENST00000590901 NFKBIBQ15653 356 aa20.19■□□□□ 0.82
CXXC1-214ENST00000590901 DLC1Q96QB1 1528 aa20.19■□□□□ 0.82
CXXC1-214ENST00000590901 UBE2Q2Q8WVN8 375 aa20.18■□□□□ 0.82
CXXC1-214ENST00000590901 ATAD2Q6PL18 1390 aa20.18■□□□□ 0.82
CXXC1-214ENST00000590901 HDGFP51858 240 aaKnown RBP20.17■□□□□ 0.82
CXXC1-214ENST00000590901 RBM33Q96EV2 1170 aaKnown RBP20.17■□□□□ 0.82
CXXC1-214ENST00000590901 PLEKHG1Q9ULL1 1385 aa20.16■□□□□ 0.82
CXXC1-214ENST00000590901 RIMS1Q86UR5 1692 aaKnown RBP20.16■□□□□ 0.82
CXXC1-214ENST00000590901 NUDT16Q96DE0 195 aaKnown RBP20.16■□□□□ 0.82
CXXC1-214ENST00000590901 RRP7AQ9Y3A4 280 aaKnown RBP20.16■□□□□ 0.82
CXXC1-214ENST00000590901 SHPRHQ149N8 1683 aa20.15■□□□□ 0.82
CXXC1-214ENST00000590901 TERF2IPQ9NYB0 399 aa20.15■□□□□ 0.82
CXXC1-214ENST00000590901 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.15■□□□□ 0.82
CXXC1-214ENST00000590901 AMOTL2Q9Y2J4 779 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms