RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 C8orf37Q96NL8 207 aa26.56■■□□□ 1.84
PRKCSH-211ENST00000590098 LRPPRCP42704 1394 aaKnown RBP26.56■■□□□ 1.84
PRKCSH-211ENST00000590098 CDC42BPGQ6DT37 1551 aa26.55■■□□□ 1.84
PRKCSH-211ENST00000590098 TMEM132EQ6IEE7 984 aa26.55■■□□□ 1.84
PRKCSH-211ENST00000590098 PIK3C2GO75747 1445 aa26.55■■□□□ 1.84
PRKCSH-211ENST00000590098 ESCO1Q5FWF5 840 aa26.54■■□□□ 1.84
PRKCSH-211ENST00000590098 TECPR2O15040 1411 aa26.54■■□□□ 1.84
PRKCSH-211ENST00000590098 ABCC11Q96J66 1382 aa26.53■■□□□ 1.84
PRKCSH-211ENST00000590098 ADAMTS2O95450 1211 aa26.52■■□□□ 1.84
PRKCSH-211ENST00000590098 KNDC1Q76NI1 1749 aa26.52■■□□□ 1.84
PRKCSH-211ENST00000590098 UPF1Q92900 1129 aaKnown RBP eCLIP26.52■■□□□ 1.84
PRKCSH-211ENST00000590098 RAB3GAP2Q9H2M9 1393 aa26.51■■□□□ 1.83
PRKCSH-211ENST00000590098 NPHP3Q7Z494 1330 aa26.5■■□□□ 1.83
PRKCSH-211ENST00000590098 QTRT2Q9H974 415 aaKnown RBP26.5■■□□□ 1.83
PRKCSH-211ENST00000590098 PLEKHH1Q9ULM0 1364 aa26.49■■□□□ 1.83
PRKCSH-211ENST00000590098 NGLY1Q96IV0 654 aa26.49■■□□□ 1.83
PRKCSH-211ENST00000590098 YTHDC2Q9H6S0 1430 aaKnown RBP26.48■■□□□ 1.83
PRKCSH-211ENST00000590098 NUTM2FA1L443 756 aa26.48■■□□□ 1.83
PRKCSH-211ENST00000590098 C14orf93Q9H972 538 aaKnown RBP26.47■■□□□ 1.83
PRKCSH-211ENST00000590098 CDK12Q9NYV4 1490 aaPredicted RBP26.46■■□□□ 1.83
PRKCSH-211ENST00000590098 FOXO3O43524 673 aa26.45■■□□□ 1.82
PRKCSH-211ENST00000590098 XPCQ01831 940 aaPredicted RBP26.45■■□□□ 1.82
PRKCSH-211ENST00000590098 MYOM2P54296 1465 aa26.44■■□□□ 1.82
PRKCSH-211ENST00000590098 DHX57Q6P158 1386 aaKnown RBP26.44■■□□□ 1.82
PRKCSH-211ENST00000590098 RBM6P78332 1123 aaKnown RBP26.43■■□□□ 1.82
PRKCSH-211ENST00000590098 CFAP70Q5T0N1 1121 aa26.43■■□□□ 1.82
PRKCSH-211ENST00000590098 SIRT1Q96EB6 747 aa26.43■■□□□ 1.82
PRKCSH-211ENST00000590098 NRXN1Q9ULB1 1477 aa26.42■■□□□ 1.82
PRKCSH-211ENST00000590098 COL22A1Q8NFW1 1626 aaPredicted RBP26.42■■□□□ 1.82
PRKCSH-211ENST00000590098 PXDNQ92626 1479 aa26.42■■□□□ 1.82
PRKCSH-211ENST00000590098 FMN2Q9NZ56 1722 aa26.41■■□□□ 1.82
PRKCSH-211ENST00000590098 USP21Q9UK80 565 aa26.38■■□□□ 1.81
PRKCSH-211ENST00000590098 RGS12O14924 1447 aa26.38■■□□□ 1.81
PRKCSH-211ENST00000590098 FNBP4Q8N3X1 1017 aaPredicted RBP26.37■■□□□ 1.81
PRKCSH-211ENST00000590098 KIF1AQ12756 1690 aa26.36■■□□□ 1.81
PRKCSH-211ENST00000590098 PRAM1Q96QH2 718 aa26.34■■□□□ 1.81
PRKCSH-211ENST00000590098 TRPC5Q9UL62 973 aaPredicted RBP26.34■■□□□ 1.81
PRKCSH-211ENST00000590098 SAFB2Q14151 953 aaKnown RBP eCLIP26.33■■□□□ 1.81
PRKCSH-211ENST00000590098 POGKQ9P215 609 aa26.33■■□□□ 1.81
PRKCSH-211ENST00000590098 RGPD8O14715 1765 aaPredicted RBP26.33■■□□□ 1.8
PRKCSH-211ENST00000590098 HRCP23327 699 aa26.32■■□□□ 1.8
PRKCSH-211ENST00000590098 MARF1Q9Y4F3 1742 aaKnown RBP26.31■■□□□ 1.8
PRKCSH-211ENST00000590098 KRT28Q7Z3Y7 464 aa26.31■■□□□ 1.8
PRKCSH-211ENST00000590098 KDM2AQ9Y2K7 1162 aa26.31■■□□□ 1.8
PRKCSH-211ENST00000590098 DCAF11Q8TEB1 546 aa26.3■■□□□ 1.8
PRKCSH-211ENST00000590098 PHF8Q9UPP1 1060 aa26.29■■□□□ 1.8
PRKCSH-211ENST00000590098 SPATA31A3Q5VYP0 1347 aa26.29■■□□□ 1.8
PRKCSH-211ENST00000590098 DLC1Q96QB1 1528 aa26.29■■□□□ 1.8
PRKCSH-211ENST00000590098 PSME1Q06323 249 aa26.27■■□□□ 1.8
PRKCSH-211ENST00000590098 STAC3Q96MF2 364 aa26.27■■□□□ 1.8
PRKCSH-211ENST00000590098 BCL9LQ86UU0 1499 aa26.26■■□□□ 1.79
PRKCSH-211ENST00000590098 ATRNO75882 1429 aa26.26■■□□□ 1.79
PRKCSH-211ENST00000590098 TRAK1Q9UPV9 953 aa26.25■■□□□ 1.79
PRKCSH-211ENST00000590098 ADGRB1O14514 1584 aa26.24■■□□□ 1.79
PRKCSH-211ENST00000590098 HAP1P54257 671 aaPredicted RBP26.22■■□□□ 1.79
PRKCSH-211ENST00000590098 TNS3Q68CZ2 1445 aa26.21■■□□□ 1.79
PRKCSH-211ENST00000590098 ANKARQ7Z5J8 1434 aa26.21■■□□□ 1.79
PRKCSH-211ENST00000590098 CABLES1Q8TDN4 633 aa26.2■■□□□ 1.78
PRKCSH-211ENST00000590098 ADGRB2O60241 1585 aa26.2■■□□□ 1.78
PRKCSH-211ENST00000590098 ATAD2Q6PL18 1390 aa26.2■■□□□ 1.78
PRKCSH-211ENST00000590098 LMOD2Q6P5Q4 547 aa26.19■■□□□ 1.78
PRKCSH-211ENST00000590098 HIRIP3Q9BW71 556 aaPredicted RBP26.19■■□□□ 1.78
PRKCSH-211ENST00000590098 MINK1Q8N4C8 1332 aaPredicted RBP26.18■■□□□ 1.78
PRKCSH-211ENST00000590098 PLEKHG5O94827 1062 aa26.18■■□□□ 1.78
PRKCSH-211ENST00000590098 PMFBP1Q8TBY8 1022 aa26.18■■□□□ 1.78
PRKCSH-211ENST00000590098 GJD4Q96KN9 370 aaPredicted RBP26.18■■□□□ 1.78
PRKCSH-211ENST00000590098 SBNO1A3KN83 1393 aa26.18■■□□□ 1.78
PRKCSH-211ENST00000590098 EIF3AQ14152 1382 aaKnown RBP26.17■■□□□ 1.78
PRKCSH-211ENST00000590098 USP32Q8NFA0 1604 aa26.17■■□□□ 1.78
PRKCSH-211ENST00000590098 UNC5CLQ8IV45 518 aa26.16■■□□□ 1.78
PRKCSH-211ENST00000590098 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.16■■□□□ 1.78
PRKCSH-211ENST00000590098 ARHGEF10O15013 1369 aa26.15■■□□□ 1.78
PRKCSH-211ENST00000590098 SLIT2O94813 1529 aa26.14■■□□□ 1.77
PRKCSH-211ENST00000590098 WASLO00401 505 aaPredicted RBP26.12■■□□□ 1.77
PRKCSH-211ENST00000590098 PRR36Q9H6K5 1346 aa26.11■■□□□ 1.77
PRKCSH-211ENST00000590098 GPRASP1Q5JY77 1395 aa26.1■■□□□ 1.77
PRKCSH-211ENST00000590098 TULP4Q9NRJ4 1543 aa26.1■■□□□ 1.77
PRKCSH-211ENST00000590098 EP400Q96L91 3159 aa26.08■■□□□ 1.77
PRKCSH-211ENST00000590098 ARHGEF28Q8N1W1 1705 aaKnown RBP26.08■■□□□ 1.76
PRKCSH-211ENST00000590098 ABCA3Q99758 1704 aa26.08■■□□□ 1.76
PRKCSH-211ENST00000590098 RALGAPBQ86X10 1494 aa26.07■■□□□ 1.76
PRKCSH-211ENST00000590098 NGDNQ8NEJ9 315 aaKnown RBP26.06■■□□□ 1.76
PRKCSH-211ENST00000590098 TRPM3Q9HCF6 1732 aaPredicted RBP26.05■■□□□ 1.76
PRKCSH-211ENST00000590098 NWD2Q9ULI1 1742 aa26.05■■□□□ 1.76
PRKCSH-211ENST00000590098 GLI3P10071 1580 aa26.05■■□□□ 1.76
PRKCSH-211ENST00000590098 FAM83GA6ND36 823 aa26.05■■□□□ 1.76
PRKCSH-211ENST00000590098 PLCH1Q4KWH8 1693 aa26.05■■□□□ 1.76
PRKCSH-211ENST00000590098 VPS72Q15906 364 aa26.03■■□□□ 1.76
PRKCSH-211ENST00000590098 CCDC9Q9Y3X0 531 aaKnown RBP26.03■■□□□ 1.76
PRKCSH-211ENST00000590098 ITSN1Q15811 1721 aa26.02■■□□□ 1.76
PRKCSH-211ENST00000590098 ALS2Q96Q42 1657 aa26.02■■□□□ 1.76
PRKCSH-211ENST00000590098 KIAA1210Q9ULL0 1709 aa26.02■■□□□ 1.76
PRKCSH-211ENST00000590098 PAK3O75914 559 aaPredicted RBP26.01■■□□□ 1.75
PRKCSH-211ENST00000590098 CCDC125Q86Z20 511 aa26.01■■□□□ 1.75
PRKCSH-211ENST00000590098 NUDT16Q96DE0 195 aaKnown RBP26.01■■□□□ 1.75
PRKCSH-211ENST00000590098 SEPT12Q8IYM1 358 aa25.99■■□□□ 1.75
PRKCSH-211ENST00000590098 CDK19Q9BWU1 502 aa25.98■■□□□ 1.75
PRKCSH-211ENST00000590098 BRWD3Q6RI45 1802 aa25.98■■□□□ 1.75
PRKCSH-211ENST00000590098 ONECUT3O60422 494 aaPredicted RBP25.97■■□□□ 1.75
PRKCSH-211ENST00000590098 ATP7BP35670 1465 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms