RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 IQGAP2Q13576 1575 aa9.52□□□□□ -0.89
DNMT1-220ENST00000589351 PADI6Q6TGC4 694 aa9.52□□□□□ -0.89
DNMT1-220ENST00000589351 ASXL2Q76L83 1435 aa9.52□□□□□ -0.89
DNMT1-220ENST00000589351 UACAQ9BZF9 1416 aa9.52□□□□□ -0.89
DNMT1-220ENST00000589351 NPDC1Q9NQX5 325 aaPredicted RBP9.52□□□□□ -0.89
DNMT1-220ENST00000589351 MYT1Q01538 1121 aa9.51□□□□□ -0.89
DNMT1-220ENST00000589351 UHRF1BP1LA0JNW5 1464 aa9.51□□□□□ -0.89
DNMT1-220ENST00000589351 GLI2P10070 1586 aa9.5□□□□□ -0.89
DNMT1-220ENST00000589351 POTECB2RU33 542 aa9.5□□□□□ -0.89
DNMT1-220ENST00000589351 PKDCCQ504Y2 493 aa9.49□□□□□ -0.89
DNMT1-220ENST00000589351 PCDHB3Q9Y5E6 796 aa9.49□□□□□ -0.89
DNMT1-220ENST00000589351 TEX14Q8IWB6 1497 aa9.48□□□□□ -0.89
DNMT1-220ENST00000589351 RAPGEF2Q9Y4G8 1499 aa9.48□□□□□ -0.89
DNMT1-220ENST00000589351 SPRYD7Q5W111 196 aa9.48□□□□□ -0.89
DNMT1-220ENST00000589351 BLOC1S3Q6QNY0 202 aa9.48□□□□□ -0.89
DNMT1-220ENST00000589351 BBXQ8WY36 941 aaPredicted RBP9.48□□□□□ -0.89
DNMT1-220ENST00000589351 EYA1Q99502 592 aa9.48□□□□□ -0.89
DNMT1-220ENST00000589351 DGAT1O75907 488 aa9.47□□□□□ -0.89
DNMT1-220ENST00000589351 TLL1O43897 1013 aa9.46□□□□□ -0.9
DNMT1-220ENST00000589351 ZNF598Q86UK7 904 aaKnown RBP9.46□□□□□ -0.9
DNMT1-220ENST00000589351 KDM5BQ9UGL1 1544 aa9.46□□□□□ -0.9
DNMT1-220ENST00000589351 PPEF1O14829 653 aaPredicted RBP9.45□□□□□ -0.9
DNMT1-220ENST00000589351 SLC4A3P48751 1232 aa9.45□□□□□ -0.9
DNMT1-220ENST00000589351 PRR14Q9BWN1 585 aa9.45□□□□□ -0.9
DNMT1-220ENST00000589351 EPRSP07814 1512 aaKnown RBP9.45□□□□□ -0.9
DNMT1-220ENST00000589351 DISP1Q96F81 1524 aa9.45□□□□□ -0.9
DNMT1-220ENST00000589351 UGGT2Q9NYU1 1516 aa9.45□□□□□ -0.9
DNMT1-220ENST00000589351 PRR20EP86478 221 aa9.44□□□□□ -0.9
DNMT1-220ENST00000589351 PRR20CP86479 221 aa9.44□□□□□ -0.9
DNMT1-220ENST00000589351 PRR20DP86480 221 aa9.44□□□□□ -0.9
DNMT1-220ENST00000589351 PRR20BP86481 221 aa9.44□□□□□ -0.9
DNMT1-220ENST00000589351 PRR20AP86496 221 aa9.44□□□□□ -0.9
DNMT1-220ENST00000589351 LIAT1Q6ZQX7 453 aa9.44□□□□□ -0.9
DNMT1-220ENST00000589351 ADGRL1O94910 1474 aa9.43□□□□□ -0.9
DNMT1-220ENST00000589351 GOLGA3Q08378 1498 aa9.43□□□□□ -0.9
DNMT1-220ENST00000589351 PPRC1Q5VV67 1664 aaKnown RBP9.42□□□□□ -0.9
DNMT1-220ENST00000589351 S1PR4O95977 384 aa9.42□□□□□ -0.9
DNMT1-220ENST00000589351 ANKLE1Q8NAG6 615 aa9.42□□□□□ -0.9
DNMT1-220ENST00000589351 WDR70Q9NW82 654 aa9.42□□□□□ -0.9
DNMT1-220ENST00000589351 ZCCHC11Q5TAX3 1644 aaKnown RBP9.42□□□□□ -0.9
DNMT1-220ENST00000589351 MAP3K4Q9Y6R4 1608 aa9.42□□□□□ -0.9
DNMT1-220ENST00000589351 FAM187AA6NFU0 413 aa9.41□□□□□ -0.9
DNMT1-220ENST00000589351 ZNF697Q5TEC3 545 aa9.41□□□□□ -0.9
DNMT1-220ENST00000589351 KIAA0556O60303 1618 aa9.41□□□□□ -0.9
DNMT1-220ENST00000589351 WDR7Q9Y4E6 1490 aa9.4□□□□□ -0.9
DNMT1-220ENST00000589351 CD109Q6YHK3 1445 aa9.4□□□□□ -0.9
DNMT1-220ENST00000589351 TNFRSF10AO00220 468 aa9.4□□□□□ -0.9
DNMT1-220ENST00000589351 GDF9O60383 454 aa9.4□□□□□ -0.9
DNMT1-220ENST00000589351 SPRYD3Q8NCJ5 442 aa9.4□□□□□ -0.9
DNMT1-220ENST00000589351 COL17A1Q9UMD9 1497 aaPredicted RBP9.39□□□□□ -0.91
DNMT1-220ENST00000589351 ST8SIA5O15466 376 aa9.37□□□□□ -0.91
DNMT1-220ENST00000589351 ACTN4O43707 911 aaKnown RBP9.37□□□□□ -0.91
DNMT1-220ENST00000589351 MAGI3Q5TCQ9 1506 aa9.36□□□□□ -0.91
DNMT1-220ENST00000589351 CFAP43Q8NDM7 1665 aa9.36□□□□□ -0.91
DNMT1-220ENST00000589351 CTTNBP2Q8WZ74 1663 aa9.36□□□□□ -0.91
DNMT1-220ENST00000589351 DNAJB2P25686 324 aa9.36□□□□□ -0.91
DNMT1-220ENST00000589351 LCE2AQ5TA79 106 aaPredicted RBP9.36□□□□□ -0.91
DNMT1-220ENST00000589351 TREML4Q6UXN2 200 aa9.36□□□□□ -0.91
DNMT1-220ENST00000589351 AAASQ9NRG9 546 aa9.36□□□□□ -0.91
DNMT1-220ENST00000589351 PLA2G2CQ5R387 149 aa9.35□□□□□ -0.91
DNMT1-220ENST00000589351 TMEM134Q9H6X4 195 aa9.35□□□□□ -0.91
DNMT1-220ENST00000589351 PHLDB1Q86UU1 1377 aa9.35□□□□□ -0.91
DNMT1-220ENST00000589351 KMT5BQ4FZB7 885 aa9.34□□□□□ -0.91
DNMT1-220ENST00000589351 ADH1BP00325 375 aa9.33□□□□□ -0.92
DNMT1-220ENST00000589351 CFHP08603 1231 aa9.33□□□□□ -0.92
DNMT1-220ENST00000589351 P3H3Q8IVL6 736 aa9.33□□□□□ -0.92
DNMT1-220ENST00000589351 ABCA8O94911 1581 aa9.33□□□□□ -0.92
DNMT1-220ENST00000589351 ADGRG1Q9Y653 693 aa9.32□□□□□ -0.92
DNMT1-220ENST00000589351 HECW2Q9P2P5 1572 aa9.32□□□□□ -0.92
DNMT1-220ENST00000589351 MLLT3P42568 568 aaPredicted RBP9.31□□□□□ -0.92
DNMT1-220ENST00000589351 PTGDRQ13258 359 aa9.31□□□□□ -0.92
DNMT1-220ENST00000589351 RBM46Q8TBY0 533 aaKnown RBP9.31□□□□□ -0.92
DNMT1-220ENST00000589351 ARAP3Q8WWN8 1544 aa9.31□□□□□ -0.92
DNMT1-220ENST00000589351 PRXQ9BXM0 1461 aa9.3□□□□□ -0.92
DNMT1-220ENST00000589351 RCCD1A6NED2 376 aa9.3□□□□□ -0.92
DNMT1-220ENST00000589351 ARID3CA6NKF2 412 aa9.3□□□□□ -0.92
DNMT1-220ENST00000589351 SLC10A3P09131 477 aa9.3□□□□□ -0.92
DNMT1-220ENST00000589351 FAM161AQ3B820 660 aa9.3□□□□□ -0.92
DNMT1-220ENST00000589351 SLC6A16Q9GZN6 736 aa9.3□□□□□ -0.92
DNMT1-220ENST00000589351 PKD2L1Q9P0L9 805 aa9.3□□□□□ -0.92
DNMT1-220ENST00000589351 NR1I2O75469 434 aa9.29□□□□□ -0.92
DNMT1-220ENST00000589351 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.29□□□□□ -0.92
DNMT1-220ENST00000589351 DACH1Q9UI36 760 aa9.29□□□□□ -0.92
DNMT1-220ENST00000589351 ARID4BQ4LE39 1312 aaPredicted RBP9.29□□□□□ -0.92
DNMT1-220ENST00000589351 ATP10BO94823 1461 aa9.28□□□□□ -0.92
DNMT1-220ENST00000589351 FOXC1Q12948 553 aa9.28□□□□□ -0.92
DNMT1-220ENST00000589351 PLEKHD1A6NEE1 506 aa9.27□□□□□ -0.93
DNMT1-220ENST00000589351 PAXIP1Q6ZW49 1069 aaPredicted RBP9.27□□□□□ -0.93
DNMT1-220ENST00000589351 SCUBE3Q8IX30 993 aa9.27□□□□□ -0.93
DNMT1-220ENST00000589351 CFAP44Q96MT7 982 aa9.27□□□□□ -0.93
DNMT1-220ENST00000589351 RAPGEF3O95398 923 aa9.26□□□□□ -0.93
DNMT1-220ENST00000589351 FBXO41Q8TF61 875 aa9.26□□□□□ -0.93
DNMT1-220ENST00000589351 NEO1Q92859 1461 aa9.26□□□□□ -0.93
DNMT1-220ENST00000589351 KIF21BO75037 1637 aa9.25□□□□□ -0.93
DNMT1-220ENST00000589351 ABCA9Q8IUA7 1624 aa9.24□□□□□ -0.93
DNMT1-220ENST00000589351 RANGAP1P46060 587 aaPredicted RBP9.24□□□□□ -0.93
DNMT1-220ENST00000589351 CRIPAKQ8N1N5 446 aa9.24□□□□□ -0.93
DNMT1-220ENST00000589351 PUS10Q3MIT2 529 aaKnown RBP9.23□□□□□ -0.93
DNMT1-220ENST00000589351 LMOD2Q6P5Q4 547 aa9.23□□□□□ -0.93
DNMT1-220ENST00000589351 SPSB2Q99619 263 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms