RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 STRCP1A6NGW2 1772 aa28.16■■■□□ 2.1
ATG4D-204ENST00000586417 PRKRIP1Q9H875 184 aaPredicted RBP28.16■■■□□ 2.1
ATG4D-204ENST00000586417 QRICH2Q9H0J4 1663 aa28.15■■■□□ 2.1
ATG4D-204ENST00000586417 POGKQ9P215 609 aa28.14■■■□□ 2.1
ATG4D-204ENST00000586417 DMRT2Q9Y5R5 561 aa28.14■■■□□ 2.1
ATG4D-204ENST00000586417 NWD1Q149M9 1564 aa28.13■■■□□ 2.09
ATG4D-204ENST00000586417 CENPBP07199 599 aaPredicted RBP28.12■■■□□ 2.09
ATG4D-204ENST00000586417 FAM135BQ49AJ0 1406 aa28.12■■■□□ 2.09
ATG4D-204ENST00000586417 PTCH1Q13635 1447 aa28.11■■■□□ 2.09
ATG4D-204ENST00000586417 SBNO2Q9Y2G9 1366 aa28.11■■■□□ 2.09
ATG4D-204ENST00000586417 SIRT1Q96EB6 747 aa28.11■■■□□ 2.09
ATG4D-204ENST00000586417 ZNF335Q9H4Z2 1342 aaPredicted RBP28.1■■■□□ 2.09
ATG4D-204ENST00000586417 RBM33Q96EV2 1170 aaKnown RBP28.09■■■□□ 2.09
ATG4D-204ENST00000586417 MINK1Q8N4C8 1332 aaPredicted RBP28.08■■■□□ 2.09
ATG4D-204ENST00000586417 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.06■■■□□ 2.08
ATG4D-204ENST00000586417 SLC24A1O60721 1099 aa28.05■■■□□ 2.08
ATG4D-204ENST00000586417 CDCA8Q53HL2 280 aa28.04■■■□□ 2.08
ATG4D-204ENST00000586417 MYOM1P52179 1685 aa28.02■■■□□ 2.08
ATG4D-204ENST00000586417 NKTRP30414 1462 aaKnown RBP28.02■■■□□ 2.08
ATG4D-204ENST00000586417 PER1O15534 1290 aaPredicted RBP28.01■■■□□ 2.07
ATG4D-204ENST00000586417 PROSER2Q86WR7 435 aaPredicted RBP28.01■■■□□ 2.07
ATG4D-204ENST00000586417 TULP4Q9NRJ4 1543 aa28■■■□□ 2.07
ATG4D-204ENST00000586417 CCDC184Q52MB2 194 aa27.96■■■□□ 2.07
ATG4D-204ENST00000586417 NALCNQ8IZF0 1738 aa27.96■■■□□ 2.07
ATG4D-204ENST00000586417 PANK3Q9H999 370 aa27.96■■■□□ 2.07
ATG4D-204ENST00000586417 TMEM94Q12767 1356 aa27.94■■■□□ 2.06
ATG4D-204ENST00000586417 EVC2Q86UK5 1308 aa27.94■■■□□ 2.06
ATG4D-204ENST00000586417 XIRP1Q702N8 1843 aaKnown RBP27.94■■■□□ 2.06
ATG4D-204ENST00000586417 KTN1Q86UP2 1357 aaKnown RBP27.93■■■□□ 2.06
ATG4D-204ENST00000586417 CDK19Q9BWU1 502 aa27.93■■■□□ 2.06
ATG4D-204ENST00000586417 LRRC7Q96NW7 1537 aa27.93■■■□□ 2.06
ATG4D-204ENST00000586417 ADGRB2O60241 1585 aa27.92■■■□□ 2.06
ATG4D-204ENST00000586417 CABP2Q9NPB3 220 aa27.92■■■□□ 2.06
ATG4D-204ENST00000586417 WASLO00401 505 aaPredicted RBP27.91■■■□□ 2.06
ATG4D-204ENST00000586417 C14orf37Q86TY3 774 aa27.91■■■□□ 2.06
ATG4D-204ENST00000586417 ADGRL3Q9HAR2 1447 aa27.9■■■□□ 2.06
ATG4D-204ENST00000586417 SRPK2P78362 688 aaKnown RBP27.88■■■□□ 2.05
ATG4D-204ENST00000586417 CNGB1Q14028 1251 aaPredicted RBP27.88■■■□□ 2.05
ATG4D-204ENST00000586417 LTBP4Q8N2S1 1624 aa27.88■■■□□ 2.05
ATG4D-204ENST00000586417 PARD3Q8TEW0 1356 aa27.88■■■□□ 2.05
ATG4D-204ENST00000586417 RALBP1Q15311 655 aa27.87■■■□□ 2.05
ATG4D-204ENST00000586417 NUTM2FA1L443 756 aa27.86■■■□□ 2.05
ATG4D-204ENST00000586417 MRS2Q9HD23 443 aa27.86■■■□□ 2.05
ATG4D-204ENST00000586417 CDC42BPGQ6DT37 1551 aa27.83■■■□□ 2.05
ATG4D-204ENST00000586417 NCOA3Q9Y6Q9 1424 aa27.83■■■□□ 2.05
ATG4D-204ENST00000586417 C19orf44Q9H6X5 657 aa27.83■■■□□ 2.05
ATG4D-204ENST00000586417 PRR36Q9H6K5 1346 aa27.82■■■□□ 2.04
ATG4D-204ENST00000586417 PUS7Q96PZ0 661 aaKnown RBP27.82■■■□□ 2.04
ATG4D-204ENST00000586417 MYBBP1AQ9BQG0 1328 aaKnown RBP27.81■■■□□ 2.04
ATG4D-204ENST00000586417 FMN2Q9NZ56 1722 aa27.81■■■□□ 2.04
ATG4D-204ENST00000586417 RGPD8O14715 1765 aaPredicted RBP27.81■■■□□ 2.04
ATG4D-204ENST00000586417 USP32Q8NFA0 1604 aa27.8■■■□□ 2.04
ATG4D-204ENST00000586417 NUDT16Q96DE0 195 aaKnown RBP27.79■■■□□ 2.04
ATG4D-204ENST00000586417 ATP7BP35670 1465 aa27.79■■■□□ 2.04
ATG4D-204ENST00000586417 AMER1Q5JTC6 1135 aaPredicted RBP27.77■■■□□ 2.04
ATG4D-204ENST00000586417 SLC12A5Q9H2X9 1139 aa27.77■■■□□ 2.04
ATG4D-204ENST00000586417 KNSTRNQ9Y448 316 aa27.77■■■□□ 2.04
ATG4D-204ENST00000586417 TMC1Q8TDI8 760 aa27.76■■■□□ 2.03
ATG4D-204ENST00000586417 CC2D1BQ5T0F9 858 aaKnown RBP27.76■■■□□ 2.03
ATG4D-204ENST00000586417 BRD4O60885 1362 aaPredicted RBP27.76■■■□□ 2.03
ATG4D-204ENST00000586417 MSH6P52701 1360 aa27.76■■■□□ 2.03
ATG4D-204ENST00000586417 ATAD2Q6PL18 1390 aa27.76■■■□□ 2.03
ATG4D-204ENST00000586417 NPC1L1Q9UHC9 1359 aa27.75■■■□□ 2.03
ATG4D-204ENST00000586417 CABP1Q9NZU7 370 aa27.73■■■□□ 2.03
ATG4D-204ENST00000586417 ATF3P18847 181 aa27.73■■■□□ 2.03
ATG4D-204ENST00000586417 CARD14Q9BXL6 1004 aa27.73■■■□□ 2.03
ATG4D-204ENST00000586417 DCCP43146 1447 aa27.72■■■□□ 2.03
ATG4D-204ENST00000586417 CCDC61Q9Y6R9 512 aa27.72■■■□□ 2.03
ATG4D-204ENST00000586417 TOPAZ1Q8N9V7 1692 aa27.72■■■□□ 2.03
ATG4D-204ENST00000586417 PPIP5K1Q6PFW1 1433 aa27.71■■■□□ 2.03
ATG4D-204ENST00000586417 NLRP13Q86W25 1043 aa27.7■■■□□ 2.02
ATG4D-204ENST00000586417 FAM9BQ8IZU0 186 aa27.7■■■□□ 2.02
ATG4D-204ENST00000586417 ANKARQ7Z5J8 1434 aa27.69■■■□□ 2.02
ATG4D-204ENST00000586417 CADPS2Q86UW7 1296 aa27.68■■■□□ 2.02
ATG4D-204ENST00000586417 MST1RQ04912 1400 aa27.68■■■□□ 2.02
ATG4D-204ENST00000586417 CD163L1Q9NR16 1453 aa27.67■■■□□ 2.02
ATG4D-204ENST00000586417 ITSN1Q15811 1721 aa27.67■■■□□ 2.02
ATG4D-204ENST00000586417 PNISRQ8TF01 805 aaKnown RBP27.66■■■□□ 2.02
ATG4D-204ENST00000586417 C1orf167Q5SNV9 1468 aa27.66■■■□□ 2.02
ATG4D-204ENST00000586417 PMFBP1Q8TBY8 1022 aa27.65■■■□□ 2.02
ATG4D-204ENST00000586417 ORAI2Q96SN7 254 aa27.65■■■□□ 2.02
ATG4D-204ENST00000586417 NINLQ9Y2I6 1382 aa27.65■■■□□ 2.02
ATG4D-204ENST00000586417 HNRNPUQ00839 825 aaKnown RBP eCLIP27.64■■■□□ 2.02
ATG4D-204ENST00000586417 NSD3Q9BZ95 1437 aa27.64■■■□□ 2.01
ATG4D-204ENST00000586417 ANKRD36BQ8N2N9 1353 aa27.64■■■□□ 2.01
ATG4D-204ENST00000586417 ESCO1Q5FWF5 840 aa27.63■■■□□ 2.01
ATG4D-204ENST00000586417 A0A1W2PP64 1363 aa27.62■■■□□ 2.01
ATG4D-204ENST00000586417 SCAF1Q9H7N4 1312 aaKnown RBP27.62■■■□□ 2.01
ATG4D-204ENST00000586417 PLEKHG3A1L390 1219 aa27.62■■■□□ 2.01
ATG4D-204ENST00000586417 ACEP12821 1306 aa27.6■■■□□ 2.01
ATG4D-204ENST00000586417 SLAIN2Q9P270 581 aa27.6■■■□□ 2.01
ATG4D-204ENST00000586417 PHF8Q9UPP1 1060 aa27.59■■■□□ 2.01
ATG4D-204ENST00000586417 CPSF1Q10570 1443 aaKnown RBP27.58■■■□□ 2.01
ATG4D-204ENST00000586417 TERF2IPQ9NYB0 399 aa27.58■■■□□ 2.01
ATG4D-204ENST00000586417 AKAP12Q02952 1782 aa27.58■■■□□ 2.01
ATG4D-204ENST00000586417 PPP2R1AP30153 589 aa27.58■■■□□ 2
ATG4D-204ENST00000586417 POLR3AO14802 1390 aaPredicted RBP27.56■■■□□ 2
ATG4D-204ENST00000586417 HDGFL2Q7Z4V5 671 aaPredicted RBP27.55■■■□□ 2
ATG4D-204ENST00000586417 NGDNQ8NEJ9 315 aaKnown RBP27.55■■■□□ 2
ATG4D-204ENST00000586417 CERKQ8TCT0 537 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms