RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 USP32Q8NFA0 1604 aa18.38■□□□□ 0.53
CDK5RAP3-237ENST00000585163 SLC12A5Q9H2X9 1139 aa18.38■□□□□ 0.53
CDK5RAP3-237ENST00000585163 FRMPD1Q5SYB0 1578 aa18.36■□□□□ 0.53
CDK5RAP3-237ENST00000585163 RUNDC1Q96C34 613 aa18.36■□□□□ 0.53
CDK5RAP3-237ENST00000585163 RPGRIP1LQ68CZ1 1315 aa18.36■□□□□ 0.53
CDK5RAP3-237ENST00000585163 IGHDP01880 384 aa18.35■□□□□ 0.53
CDK5RAP3-237ENST00000585163 IQSEC2Q5JU85 1478 aa18.35■□□□□ 0.53
CDK5RAP3-237ENST00000585163 PHF23Q9BUL5 403 aaPredicted RBP18.35■□□□□ 0.53
CDK5RAP3-237ENST00000585163 MLH3Q9UHC1 1453 aa18.35■□□□□ 0.53
CDK5RAP3-237ENST00000585163 POGZQ7Z3K3 1410 aa18.34■□□□□ 0.53
CDK5RAP3-237ENST00000585163 CLUAP1Q96AJ1 413 aa18.34■□□□□ 0.53
CDK5RAP3-237ENST00000585163 CFAP65Q6ZU64 1925 aaKnown RBP18.34■□□□□ 0.53
CDK5RAP3-237ENST00000585163 TNNT2P45379 298 aaPredicted RBP18.33■□□□□ 0.52
CDK5RAP3-237ENST00000585163 SLC4A3P48751 1232 aa18.33■□□□□ 0.52
CDK5RAP3-237ENST00000585163 TMEM132EQ6IEE7 984 aa18.33■□□□□ 0.52
CDK5RAP3-237ENST00000585163 HECW2Q9P2P5 1572 aa18.33■□□□□ 0.52
CDK5RAP3-237ENST00000585163 TCP11L2Q8N4U5 519 aa18.32■□□□□ 0.52
CDK5RAP3-237ENST00000585163 CFAP74Q9C0B2 1584 aa18.32■□□□□ 0.52
CDK5RAP3-237ENST00000585163 PANK1Q8TE04 598 aa18.32■□□□□ 0.52
CDK5RAP3-237ENST00000585163 PUS7Q96PZ0 661 aaKnown RBP18.32■□□□□ 0.52
CDK5RAP3-237ENST00000585163 VIRMAQ69YN4 1812 aaKnown RBP18.32■□□□□ 0.52
CDK5RAP3-237ENST00000585163 CANXP27824 592 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP3-237ENST00000585163 GGT6Q6P531 493 aa18.31■□□□□ 0.52
CDK5RAP3-237ENST00000585163 WDR63Q8IWG1 891 aa18.31■□□□□ 0.52
CDK5RAP3-237ENST00000585163 COG6Q9Y2V7 657 aa18.31■□□□□ 0.52
CDK5RAP3-237ENST00000585163 ABCC3O15438 1527 aa18.31■□□□□ 0.52
CDK5RAP3-237ENST00000585163 MTHFSP49914 203 aa18.3■□□□□ 0.52
CDK5RAP3-237ENST00000585163 RARSP54136 660 aaKnown RBP18.3■□□□□ 0.52
CDK5RAP3-237ENST00000585163 NEUROD2Q15784 382 aa18.3■□□□□ 0.52
CDK5RAP3-237ENST00000585163 NFKBIBQ15653 356 aa18.3■□□□□ 0.52
CDK5RAP3-237ENST00000585163 CCDC27Q2M243 656 aa18.3■□□□□ 0.52
CDK5RAP3-237ENST00000585163 RRP7AQ9Y3A4 280 aaKnown RBP18.3■□□□□ 0.52
CDK5RAP3-237ENST00000585163 AAMPQ13685 434 aa18.29■□□□□ 0.52
CDK5RAP3-237ENST00000585163 GLI2P10070 1586 aa18.29■□□□□ 0.52
CDK5RAP3-237ENST00000585163 MAPK8IP3Q9UPT6 1336 aa18.29■□□□□ 0.52
CDK5RAP3-237ENST00000585163 CD109Q6YHK3 1445 aa18.29■□□□□ 0.52
CDK5RAP3-237ENST00000585163 NCBP3Q53F19 620 aaKnown RBP18.28■□□□□ 0.52
CDK5RAP3-237ENST00000585163 CFAP53Q96M91 514 aa18.28■□□□□ 0.52
CDK5RAP3-237ENST00000585163 NSD2O96028 1365 aa18.27■□□□□ 0.52
CDK5RAP3-237ENST00000585163 ANKRD36BQ8N2N9 1353 aa18.27■□□□□ 0.52
CDK5RAP3-237ENST00000585163 FRAT1Q92837 279 aaPredicted RBP18.27■□□□□ 0.52
CDK5RAP3-237ENST00000585163 EVC2Q86UK5 1308 aa18.27■□□□□ 0.52
CDK5RAP3-237ENST00000585163 ARHGEF28Q8N1W1 1705 aaKnown RBP18.27■□□□□ 0.52
CDK5RAP3-237ENST00000585163 TULP4Q9NRJ4 1543 aa18.27■□□□□ 0.51
CDK5RAP3-237ENST00000585163 PIK3C2BO00750 1634 aa18.26■□□□□ 0.51
CDK5RAP3-237ENST00000585163 CAMSAP1Q5T5Y3 1602 aa18.26■□□□□ 0.51
CDK5RAP3-237ENST00000585163 UBE2Q2Q8WVN8 375 aa18.26■□□□□ 0.51
CDK5RAP3-237ENST00000585163 NPM1P06748 294 aaKnown RBP eCLIP18.26■□□□□ 0.51
CDK5RAP3-237ENST00000585163 SIGLEC1Q9BZZ2 1709 aa18.26■□□□□ 0.51
CDK5RAP3-237ENST00000585163 VGFO15240 615 aaPredicted RBP18.25■□□□□ 0.51
CDK5RAP3-237ENST00000585163 NEXMIFQ5QGS0 1516 aa18.25■□□□□ 0.51
CDK5RAP3-237ENST00000585163 USP19O94966 1318 aa18.25■□□□□ 0.51
CDK5RAP3-237ENST00000585163 PMFBP1Q8TBY8 1022 aa18.24■□□□□ 0.51
CDK5RAP3-237ENST00000585163 RLBP1P12271 317 aa18.23■□□□□ 0.51
CDK5RAP3-237ENST00000585163 ADGRB2O60241 1585 aa18.22■□□□□ 0.51
CDK5RAP3-237ENST00000585163 GSE1Q14687 1217 aa18.22■□□□□ 0.51
CDK5RAP3-237ENST00000585163 MYH16Q9H6N6 1097 aa18.22■□□□□ 0.51
CDK5RAP3-237ENST00000585163 PCDHB15Q9Y5E8 787 aa18.21■□□□□ 0.51
CDK5RAP3-237ENST00000585163 ZMYM3Q14202 1370 aa18.21■□□□□ 0.51
CDK5RAP3-237ENST00000585163 U2AF1L5P0DN76 240 aaPredicted RBP18.2■□□□□ 0.5
CDK5RAP3-237ENST00000585163 U2AF1Q01081 240 aaKnown RBP eCLIP18.2■□□□□ 0.56e-9■■■□□ 17
CDK5RAP3-237ENST00000585163 NUTM2DQ5VT03 806 aaPredicted RBP18.2■□□□□ 0.5
CDK5RAP3-237ENST00000585163 TNNQ9UQP3 1299 aa18.2■□□□□ 0.5
CDK5RAP3-237ENST00000585163 BCL2L13Q9BXK5 485 aa18.19■□□□□ 0.5
CDK5RAP3-237ENST00000585163 SEC24BO95487 1268 aa18.19■□□□□ 0.5
CDK5RAP3-237ENST00000585163 CABP2Q9NPB3 220 aa18.19■□□□□ 0.5
CDK5RAP3-237ENST00000585163 ARHGAP31Q2M1Z3 1444 aa18.18■□□□□ 0.5
CDK5RAP3-237ENST00000585163 ABCC11Q96J66 1382 aa18.18■□□□□ 0.5
CDK5RAP3-237ENST00000585163 ZFYVE9O95405 1425 aa18.18■□□□□ 0.5
CDK5RAP3-237ENST00000585163 NLRP1Q9C000 1473 aa18.17■□□□□ 0.5
CDK5RAP3-237ENST00000585163 NEO1Q92859 1461 aa18.17■□□□□ 0.5
CDK5RAP3-237ENST00000585163 CT47B1P0C2W7 299 aaPredicted RBP18.16■□□□□ 0.5
CDK5RAP3-237ENST00000585163 A0A1W2PP64 1363 aa18.16■□□□□ 0.5
CDK5RAP3-237ENST00000585163 DIP2CQ9Y2E4 1556 aa18.15■□□□□ 0.5
CDK5RAP3-237ENST00000585163 IDI1Q13907 227 aa18.15■□□□□ 0.5
CDK5RAP3-237ENST00000585163 RWDD1Q9H446 243 aaPredicted RBP18.15■□□□□ 0.5
CDK5RAP3-237ENST00000585163 RAPGEF3O95398 923 aa18.15■□□□□ 0.5
CDK5RAP3-237ENST00000585163 MVPQ14764 893 aaKnown RBP18.15■□□□□ 0.5
CDK5RAP3-237ENST00000585163 IL27Q8NEV9 243 aa18.15■□□□□ 0.5
CDK5RAP3-237ENST00000585163 FRAT2O75474 233 aaPredicted RBP18.14■□□□□ 0.49
CDK5RAP3-237ENST00000585163 PLEKHF1Q96S99 279 aa18.14■□□□□ 0.49
CDK5RAP3-237ENST00000585163 PDZRN3Q9UPQ7 1066 aa18.14■□□□□ 0.49
CDK5RAP3-237ENST00000585163 ZKSCAN2Q63HK3 967 aa18.14■□□□□ 0.49
CDK5RAP3-237ENST00000585163 ANO8Q9HCE9 1232 aaPredicted RBP18.14■□□□□ 0.49
CDK5RAP3-237ENST00000585163 SLC52A1Q9NWF4 448 aa18.13■□□□□ 0.49
CDK5RAP3-237ENST00000585163 COL3A1P02461 1466 aaPredicted RBP18.13■□□□□ 0.49
CDK5RAP3-237ENST00000585163 SAFB2Q14151 953 aaKnown RBP eCLIP18.13■□□□□ 0.49
CDK5RAP3-237ENST00000585163 BECN1Q14457 450 aa18.12■□□□□ 0.49
CDK5RAP3-237ENST00000585163 SRPK2P78362 688 aaKnown RBP18.11■□□□□ 0.49
CDK5RAP3-237ENST00000585163 DZIP1LQ8IYY4 767 aaKnown RBP18.11■□□□□ 0.49
CDK5RAP3-237ENST00000585163 MED14O60244 1454 aa18.11■□□□□ 0.49
CDK5RAP3-237ENST00000585163 TMPOP42166 694 aaKnown RBP18.11■□□□□ 0.49
CDK5RAP3-237ENST00000585163 ATAD2Q6PL18 1390 aa18.11■□□□□ 0.49
CDK5RAP3-237ENST00000585163 PTPRMP28827 1452 aa18.11■□□□□ 0.49
CDK5RAP3-237ENST00000585163 TSR2Q969E8 191 aaKnown RBP18.1■□□□□ 0.49
CDK5RAP3-237ENST00000585163 GGNBP2Q9H3C7 697 aa18.1■□□□□ 0.49
CDK5RAP3-237ENST00000585163 ANKRD26Q9UPS8 1709 aa18.1■□□□□ 0.49
CDK5RAP3-237ENST00000585163 FTSJ3Q8IY81 847 aaKnown RBP18.1■□□□□ 0.49
CDK5RAP3-237ENST00000585163 STK26Q9P289 416 aa18.1■□□□□ 0.49
CDK5RAP3-237ENST00000585163 TRIM35Q9UPQ4 493 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms