RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 ESF1Q9H501 851 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP3-232ENST00000584168 PRKRIP1Q9H875 184 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP3-232ENST00000584168 CLTCL1P53675 1640 aa15.3■□□□□ 0.04
CDK5RAP3-232ENST00000584168 ADGRF5Q8IZF2 1346 aa15.3■□□□□ 0.04
CDK5RAP3-232ENST00000584168 BACH2Q9BYV9 841 aa15.3■□□□□ 0.04
CDK5RAP3-232ENST00000584168 MRS2Q9HD23 443 aa15.3■□□□□ 0.04
CDK5RAP3-232ENST00000584168 CCDC7Q96M83 1385 aa15.3■□□□□ 0.04
CDK5RAP3-232ENST00000584168 TCERG1O14776 1098 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP3-232ENST00000584168 MROH2AA6NES4 1674 aa15.29■□□□□ 0.04
CDK5RAP3-232ENST00000584168 DMTNQ08495 405 aa15.29■□□□□ 0.04
CDK5RAP3-232ENST00000584168 ST20-MTHFSA0A0A6YYL1 179 aa15.29■□□□□ 0.04
CDK5RAP3-232ENST00000584168 ROCK2O75116 1388 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-232ENST00000584168 CFAP70Q5T0N1 1121 aa15.28■□□□□ 0.04
CDK5RAP3-232ENST00000584168 SPATA31E1Q6ZUB1 1445 aa15.28■□□□□ 0.04
CDK5RAP3-232ENST00000584168 FER1L4A9Z1Z3 1794 aa15.27■□□□□ 0.04
CDK5RAP3-232ENST00000584168 ANP32BQ92688 251 aaKnown RBP15.27■□□□□ 0.03
CDK5RAP3-232ENST00000584168 RNF216Q9NWF9 866 aaPredicted RBP15.27■□□□□ 0.03
CDK5RAP3-232ENST00000584168 PREX1Q8TCU6 1659 aa15.26■□□□□ 0.03
CDK5RAP3-232ENST00000584168 NOS1P29475 1434 aa15.26■□□□□ 0.03
CDK5RAP3-232ENST00000584168 STAG3Q9UJ98 1225 aa15.26■□□□□ 0.03
CDK5RAP3-232ENST00000584168 POGKQ9P215 609 aa15.26■□□□□ 0.03
CDK5RAP3-232ENST00000584168 USP47Q96K76 1375 aa15.26■□□□□ 0.03
CDK5RAP3-232ENST00000584168 TMEM132EQ6IEE7 984 aa15.25■□□□□ 0.03
CDK5RAP3-232ENST00000584168 ZMYM3Q14202 1370 aa15.25■□□□□ 0.03
CDK5RAP3-232ENST00000584168 PRDM10Q9NQV6 1147 aa15.25■□□□□ 0.03
CDK5RAP3-232ENST00000584168 ZBED9Q6R2W3 1325 aa15.24■□□□□ 0.03
CDK5RAP3-232ENST00000584168 AMER1Q5JTC6 1135 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-232ENST00000584168 PRAG1Q86YV5 1406 aa15.24■□□□□ 0.03
CDK5RAP3-232ENST00000584168 ERVK-7P63135 1459 aa15.24■□□□□ 0.03
CDK5RAP3-232ENST00000584168 TNNT2P45379 298 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-232ENST00000584168 SLC4A3P48751 1232 aa15.23■□□□□ 0.03
CDK5RAP3-232ENST00000584168 SYNMO15061 1565 aa15.23■□□□□ 0.03
CDK5RAP3-232ENST00000584168 CNKSR2Q8WXI2 1034 aa15.23■□□□□ 0.03
CDK5RAP3-232ENST00000584168 ADAMTSL3P82987 1691 aa15.23■□□□□ 0.03
CDK5RAP3-232ENST00000584168 SPATA31D1Q6ZQQ2 1576 aa15.23■□□□□ 0.03
CDK5RAP3-232ENST00000584168 ESPNB1AK53 854 aa15.22■□□□□ 0.03
CDK5RAP3-232ENST00000584168 KIF7Q2M1P5 1343 aa15.22■□□□□ 0.03
CDK5RAP3-232ENST00000584168 RGS22Q8NE09 1264 aa15.22■□□□□ 0.03
CDK5RAP3-232ENST00000584168 XRCC6P12956 609 aaKnown RBP eCLIP15.21■□□□□ 0.03
CDK5RAP3-232ENST00000584168 KIAA1211Q6ZU35 1233 aa15.21■□□□□ 0.03
CDK5RAP3-232ENST00000584168 NEURL4Q96JN8 1562 aa15.21■□□□□ 0.03
CDK5RAP3-232ENST00000584168 PIK3C2BO00750 1634 aa15.21■□□□□ 0.03
CDK5RAP3-232ENST00000584168 MADDQ8WXG6 1647 aa15.21■□□□□ 0.03
CDK5RAP3-232ENST00000584168 VGFO15240 615 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-232ENST00000584168 MS4A1P11836 297 aa15.21■□□□□ 0.03
CDK5RAP3-232ENST00000584168 KIF1BO60333 1816 aa15.2■□□□□ 0.02
CDK5RAP3-232ENST00000584168 C3P01024 1663 aa15.19■□□□□ 0.02
CDK5RAP3-232ENST00000584168 SLC52A1Q9NWF4 448 aa15.19■□□□□ 0.02
CDK5RAP3-232ENST00000584168 UHRF1BP1Q6BDS2 1440 aa15.19■□□□□ 0.02
CDK5RAP3-232ENST00000584168 RIPK4P57078 832 aa15.19■□□□□ 0.02
CDK5RAP3-232ENST00000584168 IRX3P78415 501 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-232ENST00000584168 RIMS1Q86UR5 1692 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-232ENST00000584168 KIF20AO95235 890 aa15.18■□□□□ 0.02
CDK5RAP3-232ENST00000584168 SAFB2Q14151 953 aaKnown RBP eCLIP15.18■□□□□ 0.02
CDK5RAP3-232ENST00000584168 CNPY4Q8N129 248 aa15.18■□□□□ 0.02
CDK5RAP3-232ENST00000584168 STK26Q9P289 416 aa15.18■□□□□ 0.02
CDK5RAP3-232ENST00000584168 CDK11BP21127 795 aaKnown RBP15.17■□□□□ 0.02
CDK5RAP3-232ENST00000584168 C14orf37Q86TY3 774 aa15.17■□□□□ 0.02
CDK5RAP3-232ENST00000584168 FAM13BQ9NYF5 915 aa15.17■□□□□ 0.02
CDK5RAP3-232ENST00000584168 TRAK1Q9UPV9 953 aa15.17■□□□□ 0.02
CDK5RAP3-232ENST00000584168 ADGRB3O60242 1522 aa15.16■□□□□ 0.02
CDK5RAP3-232ENST00000584168 ZSCAN20P17040 1043 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-232ENST00000584168 RALGAPBQ86X10 1494 aa15.16■□□□□ 0.02
CDK5RAP3-232ENST00000584168 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.16■□□□□ 0.02
CDK5RAP3-232ENST00000584168 ERBB4Q15303 1308 aa15.15■□□□□ 0.02
CDK5RAP3-232ENST00000584168 GOLGA6L3A6NEY3 463 aa15.15■□□□□ 0.02
CDK5RAP3-232ENST00000584168 MTERF4Q7Z6M4 381 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-232ENST00000584168 PANK2Q9BZ23 570 aa15.15■□□□□ 0.02
CDK5RAP3-232ENST00000584168 KCNG1Q9UIX4 513 aa15.15■□□□□ 0.02
CDK5RAP3-232ENST00000584168 TNRQ92752 1358 aa15.15■□□□□ 0.02
CDK5RAP3-232ENST00000584168 POLR1AO95602 1720 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP3-232ENST00000584168 HSP90B1P14625 803 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-232ENST00000584168 DNTTIP2Q5QJE6 756 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-232ENST00000584168 TMEM131LA2VDJ0 1609 aa15.12■□□□□ 0.01
CDK5RAP3-232ENST00000584168 TERF1P54274 439 aa15.12■□□□□ 0.01
CDK5RAP3-232ENST00000584168 FSD2A1L4K1 749 aa15.11■□□□□ 0.01
CDK5RAP3-232ENST00000584168 RNF123Q5XPI4 1314 aa15.11■□□□□ 0.01
CDK5RAP3-232ENST00000584168 GTPBP4Q9BZE4 634 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-232ENST00000584168 TRPM1Q7Z4N2 1603 aa15.11■□□□□ 0.01
CDK5RAP3-232ENST00000584168 TAF3Q5VWG9 929 aa15.1■□□□□ 0.01
CDK5RAP3-232ENST00000584168 NLRP1Q9C000 1473 aa15.1■□□□□ 0.01
CDK5RAP3-232ENST00000584168 LETM1O95202 739 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-232ENST00000584168 KDM5AP29375 1690 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-232ENST00000584168 IFT172Q9UG01 1749 aa15.1■□□□□ 0.01
CDK5RAP3-232ENST00000584168 MYO5BQ9ULV0 1848 aa15.09■□□□□ 0.01
CDK5RAP3-232ENST00000584168 RPGRIP1LQ68CZ1 1315 aa15.09■□□□□ 0.01
CDK5RAP3-232ENST00000584168 TESK2Q96S53 571 aa15.09■□□□□ 0.01
CDK5RAP3-232ENST00000584168 ARID3AQ99856 593 aa15.09■□□□□ 0.01
CDK5RAP3-232ENST00000584168 WWC1Q8IX03 1113 aa15.09■□□□□ 0.01
CDK5RAP3-232ENST00000584168 DISP3Q9P2K9 1392 aa15.08■□□□□ 0.01
CDK5RAP3-232ENST00000584168 SMG6Q86US8 1419 aaKnown RBP15.08■□□□□ 0.01
CDK5RAP3-232ENST00000584168 SENP3-EIF4A1A0A087X0R7 540 aa15.08■□□□□ 0
CDK5RAP3-232ENST00000584168 PTPRMP28827 1452 aa15.08■□□□□ 0
CDK5RAP3-232ENST00000584168 MYOM2P54296 1465 aa15.08■□□□□ 0
CDK5RAP3-232ENST00000584168 PPLO60437 1756 aa15.07■□□□□ 0
CDK5RAP3-232ENST00000584168 NUDCQ9Y266 331 aa15.07■□□□□ 0
CDK5RAP3-232ENST00000584168 MYO3AQ8NEV4 1616 aa15.07■□□□□ 0
CDK5RAP3-232ENST00000584168 E9PSI1 815 aa15.07■□□□□ 0
CDK5RAP3-232ENST00000584168 A2ML1A8K2U0 1454 aa15.06■□□□□ 0
CDK5RAP3-232ENST00000584168 C14orf93Q9H972 538 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms