RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 SPATA31D1Q6ZQQ2 1576 aa17.95■□□□□ 0.46
GGA3-214ENST00000582717 TULP4Q9NRJ4 1543 aa17.95■□□□□ 0.46
GGA3-214ENST00000582717 MLECQ14165 292 aa17.95■□□□□ 0.46
GGA3-214ENST00000582717 USP35Q9P2H5 1018 aa17.95■□□□□ 0.46
GGA3-214ENST00000582717 EXOC6Q8TAG9 804 aa17.94■□□□□ 0.46
GGA3-214ENST00000582717 SALL2Q9Y467 1007 aaPredicted RBP17.93■□□□□ 0.46
GGA3-214ENST00000582717 PDE4AP27815 886 aa17.92■□□□□ 0.46
GGA3-214ENST00000582717 BACH2Q9BYV9 841 aa17.91■□□□□ 0.46
GGA3-214ENST00000582717 ADAMTS8Q9UP79 889 aa17.91■□□□□ 0.46
GGA3-214ENST00000582717 SLC12A5Q9H2X9 1139 aa17.9■□□□□ 0.46
GGA3-214ENST00000582717 NSD3Q9BZ95 1437 aa17.9■□□□□ 0.46
GGA3-214ENST00000582717 A2ML1A8K2U0 1454 aa17.89■□□□□ 0.45
GGA3-214ENST00000582717 ALKQ9UM73 1620 aa17.89■□□□□ 0.45
GGA3-214ENST00000582717 PTPRMP28827 1452 aa17.89■□□□□ 0.45
GGA3-214ENST00000582717 STK26Q9P289 416 aa17.88■□□□□ 0.45
GGA3-214ENST00000582717 STAG3Q9UJ98 1225 aa17.88■□□□□ 0.45
GGA3-214ENST00000582717 PPM1GO15355 546 aaPredicted RBP17.87■□□□□ 0.45
GGA3-214ENST00000582717 EVC2Q86UK5 1308 aa17.87■□□□□ 0.45
GGA3-214ENST00000582717 SAFB2Q14151 953 aaKnown RBP eCLIP17.87■□□□□ 0.45
GGA3-214ENST00000582717 YTHDC2Q9H6S0 1430 aaKnown RBP17.87■□□□□ 0.45
GGA3-214ENST00000582717 USP32Q8NFA0 1604 aa17.87■□□□□ 0.45
GGA3-214ENST00000582717 WDR43Q15061 677 aaKnown RBP eCLIP17.86■□□□□ 0.45
GGA3-214ENST00000582717 NPM2Q86SE8 214 aaKnown RBP17.85■□□□□ 0.45
GGA3-214ENST00000582717 CDCA7LQ96GN5 454 aa17.85■□□□□ 0.45
GGA3-214ENST00000582717 PUS7Q96PZ0 661 aaKnown RBP17.84■□□□□ 0.45
GGA3-214ENST00000582717 DDRGK1Q96HY6 314 aa17.84■□□□□ 0.45
GGA3-214ENST00000582717 CABP2Q9NPB3 220 aa17.84■□□□□ 0.45
GGA3-214ENST00000582717 RIMS2Q9UQ26 1411 aa17.84■□□□□ 0.45
GGA3-214ENST00000582717 SETD1AO15047 1707 aaKnown RBP17.83■□□□□ 0.45
GGA3-214ENST00000582717 ZMYM3Q14202 1370 aa17.83■□□□□ 0.44
GGA3-214ENST00000582717 NEFMP07197 916 aa17.81■□□□□ 0.44
GGA3-214ENST00000582717 PRAM1Q96QH2 718 aa17.81■□□□□ 0.44
GGA3-214ENST00000582717 ANKRD36BQ8N2N9 1353 aa17.81■□□□□ 0.44
GGA3-214ENST00000582717 PLEKHH1Q9ULM0 1364 aa17.8■□□□□ 0.44
GGA3-214ENST00000582717 ESF1Q9H501 851 aaKnown RBP17.79■□□□□ 0.44
GGA3-214ENST00000582717 MINK1Q8N4C8 1332 aaPredicted RBP17.79■□□□□ 0.44
GGA3-214ENST00000582717 MORC1Q86VD1 984 aa17.79■□□□□ 0.44
GGA3-214ENST00000582717 NRXN3Q9Y4C0 1643 aa17.79■□□□□ 0.44
GGA3-214ENST00000582717 POLR3AO14802 1390 aaPredicted RBP17.78■□□□□ 0.44
GGA3-214ENST00000582717 POGKQ9P215 609 aa17.78■□□□□ 0.44
GGA3-214ENST00000582717 SHPRHQ149N8 1683 aa17.78■□□□□ 0.44
GGA3-214ENST00000582717 SRPK2P78362 688 aaKnown RBP17.77■□□□□ 0.44
GGA3-214ENST00000582717 CCDC146Q8IYE0 955 aa17.77■□□□□ 0.44
GGA3-214ENST00000582717 CGNL1Q0VF96 1302 aa17.77■□□□□ 0.44
GGA3-214ENST00000582717 LAS1LQ9Y4W2 734 aaKnown RBP17.77■□□□□ 0.43
GGA3-214ENST00000582717 TNNT2P45379 298 aaPredicted RBP17.76■□□□□ 0.43
GGA3-214ENST00000582717 DLC1Q96QB1 1528 aa17.76■□□□□ 0.43
GGA3-214ENST00000582717 A0A1W2PP64 1363 aa17.76■□□□□ 0.43
GGA3-214ENST00000582717 ZNF521Q96K83 1311 aa17.75■□□□□ 0.43
GGA3-214ENST00000582717 NINLQ9Y2I6 1382 aa17.75■□□□□ 0.43
GGA3-214ENST00000582717 TNRQ92752 1358 aa17.75■□□□□ 0.43
GGA3-214ENST00000582717 CRBNQ96SW2 442 aa17.74■□□□□ 0.43
GGA3-214ENST00000582717 ATAD2Q6PL18 1390 aa17.74■□□□□ 0.43
GGA3-214ENST00000582717 NSD2O96028 1365 aa17.73■□□□□ 0.43
GGA3-214ENST00000582717 CD163L1Q9NR16 1453 aa17.73■□□□□ 0.43
GGA3-214ENST00000582717 UBR1Q8IWV7 1749 aa17.73■□□□□ 0.43
GGA3-214ENST00000582717 ABCC11Q96J66 1382 aa17.72■□□□□ 0.43
GGA3-214ENST00000582717 KDM2BQ8NHM5 1336 aa17.7■□□□□ 0.42
GGA3-214ENST00000582717 APAF1O14727 1248 aa17.7■□□□□ 0.42
GGA3-214ENST00000582717 WAPLQ7Z5K2 1190 aa17.7■□□□□ 0.42
GGA3-214ENST00000582717 CDK19Q9BWU1 502 aa17.7■□□□□ 0.42
GGA3-214ENST00000582717 PLIN1O60240 522 aa17.7■□□□□ 0.42
GGA3-214ENST00000582717 CENPQQ7L2Z9 268 aaPredicted RBP17.7■□□□□ 0.42
GGA3-214ENST00000582717 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.7■□□□□ 0.42
GGA3-214ENST00000582717 METP08581 1390 aa17.7■□□□□ 0.42
GGA3-214ENST00000582717 ANKRD26Q9UPS8 1709 aa17.69■□□□□ 0.42
GGA3-214ENST00000582717 MTHFSP49914 203 aa17.69■□□□□ 0.42
GGA3-214ENST00000582717 DUSP27Q5VZP5 1158 aa17.69■□□□□ 0.42
GGA3-214ENST00000582717 GOLGA2Q08379 1002 aa17.68■□□□□ 0.42
GGA3-214ENST00000582717 KNDC1Q76NI1 1749 aa17.67■□□□□ 0.42
GGA3-214ENST00000582717 NLRP1Q9C000 1473 aa17.67■□□□□ 0.42
GGA3-214ENST00000582717 IL27Q8NEV9 243 aa17.67■□□□□ 0.42
GGA3-214ENST00000582717 TERF2IPQ9NYB0 399 aa17.67■□□□□ 0.42
GGA3-214ENST00000582717 TMEM2Q9UHN6 1383 aa17.66■□□□□ 0.42
GGA3-214ENST00000582717 GGNBP2Q9H3C7 697 aa17.65■□□□□ 0.42
GGA3-214ENST00000582717 SLFN5Q08AF3 891 aa17.65■□□□□ 0.42
GGA3-214ENST00000582717 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.65■□□□□ 0.42
GGA3-214ENST00000582717 KIF20BQ96Q89 1820 aa17.64■□□□□ 0.41
GGA3-214ENST00000582717 SPINK5Q9NQ38 1064 aaPredicted RBP17.64■□□□□ 0.41
GGA3-214ENST00000582717 CABP1Q9NZU7 370 aa17.64■□□□□ 0.41
GGA3-214ENST00000582717 DAXXQ9UER7 740 aaPredicted RBP17.64■□□□□ 0.41
GGA3-214ENST00000582717 MED14O60244 1454 aa17.63■□□□□ 0.41
GGA3-214ENST00000582717 IQSEC2Q5JU85 1478 aa17.63■□□□□ 0.41
GGA3-214ENST00000582717 C3P01024 1663 aa17.63■□□□□ 0.41
GGA3-214ENST00000582717 CEBPAP49715 358 aaPredicted RBP17.63■□□□□ 0.41
GGA3-214ENST00000582717 FAM161AQ3B820 660 aa17.63■□□□□ 0.41
GGA3-214ENST00000582717 TRMT2AQ8IZ69 625 aaKnown RBP17.63■□□□□ 0.41
GGA3-214ENST00000582717 TECPR2O15040 1411 aa17.63■□□□□ 0.41
GGA3-214ENST00000582717 FYB1O15117 783 aa17.63■□□□□ 0.41
GGA3-214ENST00000582717 GSE1Q14687 1217 aa17.63■□□□□ 0.41
GGA3-214ENST00000582717 CFAP53Q96M91 514 aa17.63■□□□□ 0.41
GGA3-214ENST00000582717 DMRT2Q9Y5R5 561 aa17.63■□□□□ 0.41
GGA3-214ENST00000582717 CPS1P31327 1500 aa17.62■□□□□ 0.41
GGA3-214ENST00000582717 HDGFP51858 240 aaKnown RBP17.62■□□□□ 0.41
GGA3-214ENST00000582717 HDGFL2Q7Z4V5 671 aaPredicted RBP17.62■□□□□ 0.41
GGA3-214ENST00000582717 TXNDC2Q86VQ3 553 aa17.62■□□□□ 0.41
GGA3-214ENST00000582717 ATP7BP35670 1465 aa17.61■□□□□ 0.41
GGA3-214ENST00000582717 C20orf194Q5TEA3 1177 aa17.61■□□□□ 0.41
GGA3-214ENST00000582717 FER1L4A9Z1Z3 1794 aa17.61■□□□□ 0.41
GGA3-214ENST00000582717 ADAMTS13Q76LX8 1427 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms