RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 PIK3C2BO00750 1634 aa10.25□□□□□ -0.77
TVP23C-208ENST00000581273 DUOX2Q9NRD8 1548 aa10.24□□□□□ -0.77
TVP23C-208ENST00000581273 R3HDM1Q15032 1099 aaKnown RBP10.24□□□□□ -0.77
TVP23C-208ENST00000581273 SLC26A8Q96RN1 970 aa10.24□□□□□ -0.77
TVP23C-208ENST00000581273 TRPC5Q9UL62 973 aaPredicted RBP10.24□□□□□ -0.77
TVP23C-208ENST00000581273 VASPP50552 380 aaPredicted RBP10.23□□□□□ -0.77
TVP23C-208ENST00000581273 SF3B2Q13435 895 aaKnown RBP10.23□□□□□ -0.77
TVP23C-208ENST00000581273 RTL5Q5HYW3 569 aaPredicted RBP10.23□□□□□ -0.77
TVP23C-208ENST00000581273 KIF15Q9NS87 1388 aa10.23□□□□□ -0.77
TVP23C-208ENST00000581273 UTRNP46939 3433 aa10.23□□□□□ -0.77
TVP23C-208ENST00000581273 SLIT1O75093 1534 aa10.23□□□□□ -0.77
TVP23C-208ENST00000581273 SLC34A2O95436 690 aa10.22□□□□□ -0.77
TVP23C-208ENST00000581273 MYOM3Q5VTT5 1437 aa10.22□□□□□ -0.77
TVP23C-208ENST00000581273 ARHGAP23Q9P227 1491 aa10.22□□□□□ -0.77
TVP23C-208ENST00000581273 CHIC2Q9UKJ5 165 aa10.21□□□□□ -0.77
TVP23C-208ENST00000581273 KANK1Q14678 1352 aa10.21□□□□□ -0.78
TVP23C-208ENST00000581273 TMEM2Q9UHN6 1383 aa10.21□□□□□ -0.78
TVP23C-208ENST00000581273 ATRNO75882 1429 aa10.21□□□□□ -0.78
TVP23C-208ENST00000581273 RRBP1Q9P2E9 1410 aaKnown RBP10.21□□□□□ -0.78
TVP23C-208ENST00000581273 IDI1Q13907 227 aa10.2□□□□□ -0.78
TVP23C-208ENST00000581273 PPP4R2Q9NY27 417 aa10.2□□□□□ -0.78
TVP23C-208ENST00000581273 CAMTA1Q9Y6Y1 1673 aa10.2□□□□□ -0.78
TVP23C-208ENST00000581273 CROCC2H7BZ55 1655 aa10.19□□□□□ -0.78
TVP23C-208ENST00000581273 EFCAB6Q5THR3 1501 aa10.19□□□□□ -0.78
TVP23C-208ENST00000581273 NKTRP30414 1462 aaKnown RBP10.19□□□□□ -0.78
TVP23C-208ENST00000581273 BRINP3Q76B58 766 aa10.19□□□□□ -0.78
TVP23C-208ENST00000581273 ABCC5O15440 1437 aa10.18□□□□□ -0.78
TVP23C-208ENST00000581273 ARHGAP31Q2M1Z3 1444 aa10.18□□□□□ -0.78
TVP23C-208ENST00000581273 NOP58Q9Y2X3 529 aaKnown RBP10.18□□□□□ -0.78
TVP23C-208ENST00000581273 MYO5BQ9ULV0 1848 aa10.18□□□□□ -0.78
TVP23C-208ENST00000581273 PTPN23Q9H3S7 1636 aa10.18□□□□□ -0.78
TVP23C-208ENST00000581273 SETD5Q9C0A6 1442 aa10.17□□□□□ -0.78
TVP23C-208ENST00000581273 PNPLA6Q8IY17 1366 aa10.17□□□□□ -0.78
TVP23C-208ENST00000581273 BRWD3Q6RI45 1802 aa10.17□□□□□ -0.78
TVP23C-208ENST00000581273 C14orf37Q86TY3 774 aa10.17□□□□□ -0.78
TVP23C-208ENST00000581273 DDX17Q92841 729 aaKnown RBP10.17□□□□□ -0.78
TVP23C-208ENST00000581273 ERBINQ96RT1 1412 aa10.16□□□□□ -0.78
TVP23C-208ENST00000581273 PPP1R15AO75807 674 aaPredicted RBP10.16□□□□□ -0.78
TVP23C-208ENST00000581273 RBM42Q9BTD8 480 aaKnown RBP10.16□□□□□ -0.78
TVP23C-208ENST00000581273 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.16□□□□□ -0.78
TVP23C-208ENST00000581273 TET3O43151 1660 aa10.15□□□□□ -0.78
TVP23C-208ENST00000581273 CHGAP10645 457 aaKnown RBP10.15□□□□□ -0.78
TVP23C-208ENST00000581273 DAPK1P53355 1430 aa10.15□□□□□ -0.79
TVP23C-208ENST00000581273 ATF3P18847 181 aa10.14□□□□□ -0.79
TVP23C-208ENST00000581273 FNBP4Q8N3X1 1017 aaPredicted RBP10.14□□□□□ -0.79
TVP23C-208ENST00000581273 LRRC59Q96AG4 307 aaKnown RBP10.14□□□□□ -0.79
TVP23C-208ENST00000581273 CHD2O14647 1828 aaKnown RBP10.14□□□□□ -0.79
TVP23C-208ENST00000581273 ANKRD30AQ9BXX3 1397 aa10.14□□□□□ -0.79
TVP23C-208ENST00000581273 ADGRB3O60242 1522 aa10.13□□□□□ -0.79
TVP23C-208ENST00000581273 ANP32AP39687 249 aaKnown RBP10.13□□□□□ -0.79
TVP23C-208ENST00000581273 BAG6P46379 1132 aa10.13□□□□□ -0.79
TVP23C-208ENST00000581273 EN1Q05925 392 aaPredicted RBP10.13□□□□□ -0.79
TVP23C-208ENST00000581273 CADPS2Q86UW7 1296 aa10.13□□□□□ -0.79
TVP23C-208ENST00000581273 IFNLR1Q8IU57 520 aaPredicted RBP10.13□□□□□ -0.79
TVP23C-208ENST00000581273 USP35Q9P2H5 1018 aa10.13□□□□□ -0.79
TVP23C-208ENST00000581273 UBE2Q2Q8WVN8 375 aa10.12□□□□□ -0.79
TVP23C-208ENST00000581273 GJD4Q96KN9 370 aaPredicted RBP10.12□□□□□ -0.79
TVP23C-208ENST00000581273 UNC13BO14795 1591 aa10.12□□□□□ -0.79
TVP23C-208ENST00000581273 ASXL1Q8IXJ9 1541 aa10.12□□□□□ -0.79
TVP23C-208ENST00000581273 GCC2Q8IWJ2 1684 aa10.12□□□□□ -0.79
TVP23C-208ENST00000581273 FAM50AQ14320 339 aaKnown RBP10.11□□□□□ -0.79
TVP23C-208ENST00000581273 SLC52A1Q9NWF4 448 aa10.11□□□□□ -0.79
TVP23C-208ENST00000581273 PPP1R1BQ9UD71 204 aaPredicted RBP10.11□□□□□ -0.79
TVP23C-208ENST00000581273 NOS1P29475 1434 aa10.1□□□□□ -0.79
TVP23C-208ENST00000581273 RIMS2Q9UQ26 1411 aa10.1□□□□□ -0.79
TVP23C-208ENST00000581273 GIGYF1O75420 1035 aaPredicted RBP10.1□□□□□ -0.79
TVP23C-208ENST00000581273 DDX10Q13206 875 aaKnown RBP10.1□□□□□ -0.79
TVP23C-208ENST00000581273 AKT1S1Q96B36 256 aa10.1□□□□□ -0.79
TVP23C-208ENST00000581273 LMTK2Q8IWU2 1503 aa10.1□□□□□ -0.79
TVP23C-208ENST00000581273 ITGAEP38570 1179 aa10.09□□□□□ -0.79
TVP23C-208ENST00000581273 HDGFP51858 240 aaKnown RBP10.09□□□□□ -0.79
TVP23C-208ENST00000581273 C19orf44Q9H6X5 657 aa10.09□□□□□ -0.79
TVP23C-208ENST00000581273 CHD4Q14839 1912 aa10.09□□□□□ -0.79
TVP23C-208ENST00000581273 PLEKHG1Q9ULL1 1385 aa10.08□□□□□ -0.8
TVP23C-208ENST00000581273 GLI3P10071 1580 aa10.07□□□□□ -0.8
TVP23C-208ENST00000581273 NINLQ9Y2I6 1382 aa10.07□□□□□ -0.8
TVP23C-208ENST00000581273 TMEM131LA2VDJ0 1609 aa10.07□□□□□ -0.8
TVP23C-208ENST00000581273 ZFYVE9O95405 1425 aa10.07□□□□□ -0.8
TVP23C-208ENST00000581273 SEPT12Q8IYM1 358 aa10.06□□□□□ -0.8
TVP23C-208ENST00000581273 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.06□□□□□ -0.8
TVP23C-208ENST00000581273 ZBTB47Q9UFB7 747 aaPredicted RBP10.06□□□□□ -0.8
TVP23C-208ENST00000581273 TBX22Q9Y458 520 aa10.06□□□□□ -0.8
TVP23C-208ENST00000581273 RALGAPBQ86X10 1494 aa10.05□□□□□ -0.8
TVP23C-208ENST00000581273 SPHKAPQ2M3C7 1700 aa10.05□□□□□ -0.8
TVP23C-208ENST00000581273 IPO9Q96P70 1041 aaKnown RBP10.05□□□□□ -0.8
TVP23C-208ENST00000581273 PCDH10Q9P2E7 1040 aa10.05□□□□□ -0.8
TVP23C-208ENST00000581273 ANKRD50Q9ULJ7 1429 aa10.05□□□□□ -0.8
TVP23C-208ENST00000581273 NCOA3Q9Y6Q9 1424 aa10.05□□□□□ -0.8
TVP23C-208ENST00000581273 C11orf95C9JLR9 678 aaPredicted RBP10.04□□□□□ -0.8
TVP23C-208ENST00000581273 PPM1GO15355 546 aaPredicted RBP10.04□□□□□ -0.8
TVP23C-208ENST00000581273 EZH2Q15910 746 aaKnown RBP10.04□□□□□ -0.8
TVP23C-208ENST00000581273 AMOTL2Q9Y2J4 779 aa10.04□□□□□ -0.8
TVP23C-208ENST00000581273 PTCH1Q13635 1447 aa10.04□□□□□ -0.8
TVP23C-208ENST00000581273 RPRD2Q5VT52 1461 aaKnown RBP10.04□□□□□ -0.8
TVP23C-208ENST00000581273 RAB3GAP2Q9H2M9 1393 aa10.03□□□□□ -0.8
TVP23C-208ENST00000581273 KRT27Q7Z3Y8 459 aa10.03□□□□□ -0.8
TVP23C-208ENST00000581273 E9PCH4 1651 aa10.02□□□□□ -0.8
TVP23C-208ENST00000581273 ADAMTS13Q76LX8 1427 aa10.02□□□□□ -0.81
TVP23C-208ENST00000581273 ADGRL2O95490 1459 aa10.02□□□□□ -0.81
TVP23C-208ENST00000581273 MST1RQ04912 1400 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms