RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 GJD4Q96KN9 370 aaPredicted RBP20.74■□□□□ 0.91
SREBF1-217ENST00000577897 RRBP1Q9P2E9 1410 aaKnown RBP20.74■□□□□ 0.91
SREBF1-217ENST00000577897 MYOM2P54296 1465 aa20.73■□□□□ 0.91
SREBF1-217ENST00000577897 NUP155O75694 1391 aa20.72■□□□□ 0.91
SREBF1-217ENST00000577897 MARF1Q9Y4F3 1742 aaKnown RBP20.71■□□□□ 0.91
SREBF1-217ENST00000577897 SF3B2Q13435 895 aaKnown RBP20.71■□□□□ 0.91
SREBF1-217ENST00000577897 SPHKAPQ2M3C7 1700 aa20.69■□□□□ 0.9
SREBF1-217ENST00000577897 CCER1Q8TC90 406 aaPredicted RBP20.68■□□□□ 0.9
SREBF1-217ENST00000577897 XPCQ01831 940 aaPredicted RBP20.67■□□□□ 0.9
SREBF1-217ENST00000577897 ROBO2Q9HCK4 1378 aa20.67■□□□□ 0.9
SREBF1-217ENST00000577897 RALGAPBQ86X10 1494 aa20.67■□□□□ 0.9
SREBF1-217ENST00000577897 NEXMIFQ5QGS0 1516 aa20.67■□□□□ 0.9
SREBF1-217ENST00000577897 GLI3P10071 1580 aa20.67■□□□□ 0.9
SREBF1-217ENST00000577897 NPHP3Q7Z494 1330 aa20.66■□□□□ 0.9
SREBF1-217ENST00000577897 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.65■□□□□ 0.9
SREBF1-217ENST00000577897 PSDA5PKW4 1024 aaPredicted RBP20.65■□□□□ 0.9
SREBF1-217ENST00000577897 ESCO1Q5FWF5 840 aa20.65■□□□□ 0.9
SREBF1-217ENST00000577897 BRWD3Q6RI45 1802 aa20.64■□□□□ 0.9
SREBF1-217ENST00000577897 UNC5CLQ8IV45 518 aa20.63■□□□□ 0.89
SREBF1-217ENST00000577897 PXDNQ92626 1479 aa20.62■□□□□ 0.89
SREBF1-217ENST00000577897 CLTCL1P53675 1640 aa20.6■□□□□ 0.89
SREBF1-217ENST00000577897 FOXO3O43524 673 aa20.6■□□□□ 0.89
SREBF1-217ENST00000577897 SEPT12Q8IYM1 358 aa20.6■□□□□ 0.89
SREBF1-217ENST00000577897 SLIT2O94813 1529 aa20.59■□□□□ 0.89
SREBF1-217ENST00000577897 ROCK1Q13464 1354 aa20.59■□□□□ 0.89
SREBF1-217ENST00000577897 HFM1A2PYH4 1435 aa20.58■□□□□ 0.88
SREBF1-217ENST00000577897 CDC42BPGQ6DT37 1551 aa20.56■□□□□ 0.88
SREBF1-217ENST00000577897 NUTM2FA1L443 756 aa20.56■□□□□ 0.88
SREBF1-217ENST00000577897 YY1P25490 414 aa20.56■□□□□ 0.88
SREBF1-217ENST00000577897 CCDC9Q9Y3X0 531 aaKnown RBP20.56■□□□□ 0.88
SREBF1-217ENST00000577897 ITGAEP38570 1179 aa20.55■□□□□ 0.88
SREBF1-217ENST00000577897 LRPPRCP42704 1394 aaKnown RBP20.55■□□□□ 0.88
SREBF1-217ENST00000577897 KIF1BO60333 1816 aa20.55■□□□□ 0.88
SREBF1-217ENST00000577897 USP32Q8NFA0 1604 aa20.54■□□□□ 0.88
SREBF1-217ENST00000577897 BAG6P46379 1132 aa20.54■□□□□ 0.88
SREBF1-217ENST00000577897 HAP1P54257 671 aaPredicted RBP20.54■□□□□ 0.88
SREBF1-217ENST00000577897 KRT27Q7Z3Y8 459 aa20.54■□□□□ 0.88
SREBF1-217ENST00000577897 A0A0G2JS52 829 aa20.53■□□□□ 0.88
SREBF1-217ENST00000577897 PLEKHG5O94827 1062 aa20.53■□□□□ 0.88
SREBF1-217ENST00000577897 MYT1Q01538 1121 aa20.53■□□□□ 0.88
SREBF1-217ENST00000577897 PRAG1Q86YV5 1406 aa20.53■□□□□ 0.88
SREBF1-217ENST00000577897 VGFO15240 615 aaPredicted RBP20.51■□□□□ 0.87
SREBF1-217ENST00000577897 VPS72Q15906 364 aa20.49■□□□□ 0.87
SREBF1-217ENST00000577897 NAIPQ13075 1403 aa20.49■□□□□ 0.87
SREBF1-217ENST00000577897 SPATA31A3Q5VYP0 1347 aa20.49■□□□□ 0.87
SREBF1-217ENST00000577897 PLCH1Q4KWH8 1693 aa20.48■□□□□ 0.87
SREBF1-217ENST00000577897 R3HDM1Q15032 1099 aaKnown RBP20.47■□□□□ 0.87
SREBF1-217ENST00000577897 EN1Q05925 392 aaPredicted RBP20.46■□□□□ 0.87
SREBF1-217ENST00000577897 CABLES1Q8TDN4 633 aa20.45■□□□□ 0.86
SREBF1-217ENST00000577897 CLSPNQ9HAW4 1339 aa20.45■□□□□ 0.86
SREBF1-217ENST00000577897 CCDC144AA2RUR9 1427 aa20.44■□□□□ 0.86
SREBF1-217ENST00000577897 NWD2Q9ULI1 1742 aa20.44■□□□□ 0.86
SREBF1-217ENST00000577897 KIF1AQ12756 1690 aa20.43■□□□□ 0.86
SREBF1-217ENST00000577897 ONECUT3O60422 494 aaPredicted RBP20.43■□□□□ 0.86
SREBF1-217ENST00000577897 KRT28Q7Z3Y7 464 aa20.43■□□□□ 0.86
SREBF1-217ENST00000577897 STK26Q9P289 416 aa20.43■□□□□ 0.86
SREBF1-217ENST00000577897 WAPLQ7Z5K2 1190 aa20.42■□□□□ 0.86
SREBF1-217ENST00000577897 RGPD1P0DJD0 1748 aa20.41■□□□□ 0.86
SREBF1-217ENST00000577897 FAM98CQ17RN3 349 aaKnown RBP20.41■□□□□ 0.86
SREBF1-217ENST00000577897 LMOD2Q6P5Q4 547 aa20.41■□□□□ 0.86
SREBF1-217ENST00000577897 TNS3Q68CZ2 1445 aa20.41■□□□□ 0.86
SREBF1-217ENST00000577897 PPLO60437 1756 aa20.4■□□□□ 0.86
SREBF1-217ENST00000577897 FMN2Q9NZ56 1722 aa20.4■□□□□ 0.86
SREBF1-217ENST00000577897 FAM182BQ5T319 152 aa20.39■□□□□ 0.85
SREBF1-217ENST00000577897 ABCA3Q99758 1704 aa20.39■□□□□ 0.85
SREBF1-217ENST00000577897 RPGRIP1LQ68CZ1 1315 aa20.38■□□□□ 0.85
SREBF1-217ENST00000577897 PLEKHH1Q9ULM0 1364 aa20.37■□□□□ 0.85
SREBF1-217ENST00000577897 ACIN1Q9UKV3 1341 aaKnown RBP20.36■□□□□ 0.85
SREBF1-217ENST00000577897 IFFO2Q5TF58 517 aa20.36■□□□□ 0.85
SREBF1-217ENST00000577897 PSME1Q06323 249 aa20.35■□□□□ 0.85
SREBF1-217ENST00000577897 EZH2Q15910 746 aaKnown RBP20.35■□□□□ 0.85
SREBF1-217ENST00000577897 NRAPQ86VF7 1730 aa20.34■□□□□ 0.85
SREBF1-217ENST00000577897 FAM83GA6ND36 823 aa20.34■□□□□ 0.85
SREBF1-217ENST00000577897 TNS1Q9HBL0 1735 aaKnown RBP20.33■□□□□ 0.85
SREBF1-217ENST00000577897 PHF8Q9UPP1 1060 aa20.33■□□□□ 0.85
SREBF1-217ENST00000577897 TECPR2O15040 1411 aa20.33■□□□□ 0.84
SREBF1-217ENST00000577897 BTG4Q9NY30 223 aa20.32■□□□□ 0.84
SREBF1-217ENST00000577897 RGPD8O14715 1765 aaPredicted RBP20.31■□□□□ 0.84
SREBF1-217ENST00000577897 ADGRF5Q8IZF2 1346 aa20.31■□□□□ 0.84
SREBF1-217ENST00000577897 DISP2A7MBM2 1401 aa20.31■□□□□ 0.84
SREBF1-217ENST00000577897 DCAF8L1A6NGE4 600 aa20.31■□□□□ 0.84
SREBF1-217ENST00000577897 ARHGEF10O15013 1369 aa20.31■□□□□ 0.84
SREBF1-217ENST00000577897 KNDC1Q76NI1 1749 aa20.3■□□□□ 0.84
SREBF1-217ENST00000577897 IFT172Q9UG01 1749 aa20.3■□□□□ 0.84
SREBF1-217ENST00000577897 TMEM132EQ6IEE7 984 aa20.3■□□□□ 0.84
SREBF1-217ENST00000577897 ADGRB2O60241 1585 aa20.29■□□□□ 0.84
SREBF1-217ENST00000577897 SBNO1A3KN83 1393 aa20.29■□□□□ 0.84
SREBF1-217ENST00000577897 ABCC11Q96J66 1382 aa20.27■□□□□ 0.84
SREBF1-217ENST00000577897 RAB3GAP2Q9H2M9 1393 aa20.27■□□□□ 0.84
SREBF1-217ENST00000577897 NRXN1Q9ULB1 1477 aa20.26■□□□□ 0.83
SREBF1-217ENST00000577897 TRIM37O94972 964 aa20.25■□□□□ 0.83
SREBF1-217ENST00000577897 CAMKK2Q96RR4 588 aa20.25■□□□□ 0.83
SREBF1-217ENST00000577897 COL14A1Q05707 1796 aaKnown RBP20.25■□□□□ 0.83
SREBF1-217ENST00000577897 THSD7AQ9UPZ6 1657 aa20.25■□□□□ 0.83
SREBF1-217ENST00000577897 RGL3Q3MIN7 710 aa20.24■□□□□ 0.83
SREBF1-217ENST00000577897 PPP1R1BQ9UD71 204 aaPredicted RBP20.24■□□□□ 0.83
SREBF1-217ENST00000577897 SPATA31A5Q5VU36 1347 aa20.24■□□□□ 0.83
SREBF1-217ENST00000577897 SPATA31A7Q8IWB4 1347 aa20.24■□□□□ 0.83
SREBF1-217ENST00000577897 DHX57Q6P158 1386 aaKnown RBP20.23■□□□□ 0.83
SREBF1-217ENST00000577897 PMFBP1Q8TBY8 1022 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms