RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 PPARGC1BQ86YN6 1023 aaKnown RBP18.56■□□□□ 0.56
PRPF8-208ENST00000573716 VGFO15240 615 aaPredicted RBP18.55■□□□□ 0.56
PRPF8-208ENST00000573716 NPHP3Q7Z494 1330 aa18.54■□□□□ 0.56
PRPF8-208ENST00000573716 MYOM2P54296 1465 aa18.54■□□□□ 0.56
PRPF8-208ENST00000573716 CCDC125Q86Z20 511 aa18.54■□□□□ 0.56
PRPF8-208ENST00000573716 BCL9LQ86UU0 1499 aa18.53■□□□□ 0.56
PRPF8-208ENST00000573716 HFM1A2PYH4 1435 aa18.52■□□□□ 0.56
PRPF8-208ENST00000573716 EP400Q96L91 3159 aa18.52■□□□□ 0.56
PRPF8-208ENST00000573716 NUTM2FA1L443 756 aa18.52■□□□□ 0.56
PRPF8-208ENST00000573716 FOXO3O43524 673 aa18.52■□□□□ 0.56
PRPF8-208ENST00000573716 GJD4Q96KN9 370 aaPredicted RBP18.52■□□□□ 0.56
PRPF8-208ENST00000573716 PXDNQ92626 1479 aa18.51■□□□□ 0.55
PRPF8-208ENST00000573716 CDC42BPGQ6DT37 1551 aa18.49■□□□□ 0.55
PRPF8-208ENST00000573716 PPLO60437 1756 aa18.48■□□□□ 0.55
PRPF8-208ENST00000573716 STK26Q9P289 416 aa18.48■□□□□ 0.55
PRPF8-208ENST00000573716 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.47■□□□□ 0.55
PRPF8-208ENST00000573716 PLEKHG5O94827 1062 aa18.47■□□□□ 0.55
PRPF8-208ENST00000573716 BRWD3Q6RI45 1802 aa18.46■□□□□ 0.55
PRPF8-208ENST00000573716 RALGAPBQ86X10 1494 aa18.46■□□□□ 0.55
PRPF8-208ENST00000573716 LRPPRCP42704 1394 aaKnown RBP18.46■□□□□ 0.55
PRPF8-208ENST00000573716 SF3B2Q13435 895 aaKnown RBP18.46■□□□□ 0.55
PRPF8-208ENST00000573716 DEFB132Q7Z7B7 95 aa18.46■□□□□ 0.55
PRPF8-208ENST00000573716 UNC5CLQ8IV45 518 aa18.46■□□□□ 0.55
PRPF8-208ENST00000573716 BLMP54132 1417 aaPredicted RBP18.46■□□□□ 0.55
PRPF8-208ENST00000573716 NAIPQ13075 1403 aa18.46■□□□□ 0.55
PRPF8-208ENST00000573716 PRAG1Q86YV5 1406 aa18.46■□□□□ 0.55
PRPF8-208ENST00000573716 GLI3P10071 1580 aa18.46■□□□□ 0.55
PRPF8-208ENST00000573716 RPGRIP1LQ68CZ1 1315 aa18.46■□□□□ 0.55
PRPF8-208ENST00000573716 HAP1P54257 671 aaPredicted RBP18.45■□□□□ 0.54
PRPF8-208ENST00000573716 WAPLQ7Z5K2 1190 aa18.43■□□□□ 0.54
PRPF8-208ENST00000573716 CCDC9Q9Y3X0 531 aaKnown RBP18.43■□□□□ 0.54
PRPF8-208ENST00000573716 SEPT12Q8IYM1 358 aa18.41■□□□□ 0.54
PRPF8-208ENST00000573716 USP32Q8NFA0 1604 aa18.41■□□□□ 0.54
PRPF8-208ENST00000573716 SLIT2O94813 1529 aa18.4■□□□□ 0.54
PRPF8-208ENST00000573716 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
PRPF8-208ENST00000573716 SPATA31A3Q5VYP0 1347 aa18.4■□□□□ 0.54
PRPF8-208ENST00000573716 KIF1AQ12756 1690 aa18.38■□□□□ 0.53
PRPF8-208ENST00000573716 FMN2Q9NZ56 1722 aa18.38■□□□□ 0.53
PRPF8-208ENST00000573716 A0A0G2JS52 829 aa18.38■□□□□ 0.53
PRPF8-208ENST00000573716 MYT1Q01538 1121 aa18.38■□□□□ 0.53
PRPF8-208ENST00000573716 KRT28Q7Z3Y7 464 aa18.38■□□□□ 0.53
PRPF8-208ENST00000573716 ADGRF5Q8IZF2 1346 aa18.38■□□□□ 0.53
PRPF8-208ENST00000573716 PSDA5PKW4 1024 aaPredicted RBP18.37■□□□□ 0.53
PRPF8-208ENST00000573716 RGL3Q3MIN7 710 aa18.37■□□□□ 0.53
PRPF8-208ENST00000573716 TMEM132EQ6IEE7 984 aa18.37■□□□□ 0.53
PRPF8-208ENST00000573716 LMOD2Q6P5Q4 547 aa18.37■□□□□ 0.53
PRPF8-208ENST00000573716 CABLES1Q8TDN4 633 aa18.37■□□□□ 0.53
PRPF8-208ENST00000573716 PLEKHH1Q9ULM0 1364 aa18.37■□□□□ 0.53
PRPF8-208ENST00000573716 CCDC144AA2RUR9 1427 aa18.37■□□□□ 0.53
PRPF8-208ENST00000573716 PLCH1Q4KWH8 1693 aa18.37■□□□□ 0.53
PRPF8-208ENST00000573716 RRBP1Q9P2E9 1410 aaKnown RBP18.36■□□□□ 0.53
PRPF8-208ENST00000573716 RGPD8O14715 1765 aaPredicted RBP18.35■□□□□ 0.53
PRPF8-208ENST00000573716 LRP5O75197 1615 aa18.35■□□□□ 0.53
PRPF8-208ENST00000573716 VPS72Q15906 364 aa18.34■□□□□ 0.53
PRPF8-208ENST00000573716 KRT27Q7Z3Y8 459 aa18.34■□□□□ 0.53
PRPF8-208ENST00000573716 TECPR2O15040 1411 aa18.33■□□□□ 0.53
PRPF8-208ENST00000573716 KNDC1Q76NI1 1749 aa18.33■□□□□ 0.52
PRPF8-208ENST00000573716 IFT172Q9UG01 1749 aa18.33■□□□□ 0.52
PRPF8-208ENST00000573716 TNS3Q68CZ2 1445 aa18.32■□□□□ 0.52
PRPF8-208ENST00000573716 NWD2Q9ULI1 1742 aa18.32■□□□□ 0.52
PRPF8-208ENST00000573716 PSME1Q06323 249 aa18.32■□□□□ 0.52
PRPF8-208ENST00000573716 BAG6P46379 1132 aa18.31■□□□□ 0.52
PRPF8-208ENST00000573716 PHF8Q9UPP1 1060 aa18.31■□□□□ 0.52
PRPF8-208ENST00000573716 ABCA3Q99758 1704 aa18.31■□□□□ 0.52
PRPF8-208ENST00000573716 ABCC11Q96J66 1382 aa18.3■□□□□ 0.52
PRPF8-208ENST00000573716 YTHDC2Q9H6S0 1430 aaKnown RBP18.29■□□□□ 0.52
PRPF8-208ENST00000573716 SAFB2Q14151 953 aaKnown RBP eCLIP18.28■□□□□ 0.52
PRPF8-208ENST00000573716 FAM98CQ17RN3 349 aaKnown RBP18.28■□□□□ 0.52
PRPF8-208ENST00000573716 ANKRD30BQ9BXX2 1392 aa18.28■□□□□ 0.52
PRPF8-208ENST00000573716 HRCP23327 699 aa18.27■□□□□ 0.52
PRPF8-208ENST00000573716 FAM83GA6ND36 823 aa18.26■□□□□ 0.51
PRPF8-208ENST00000573716 ONECUT3O60422 494 aaPredicted RBP18.26■□□□□ 0.51
PRPF8-208ENST00000573716 ARHGEF10O15013 1369 aa18.26■□□□□ 0.51
PRPF8-208ENST00000573716 PIK3C2GO75747 1445 aa18.24■□□□□ 0.51
PRPF8-208ENST00000573716 SPATA31E1Q6ZUB1 1445 aa18.24■□□□□ 0.51
PRPF8-208ENST00000573716 EN1Q05925 392 aaPredicted RBP18.24■□□□□ 0.51
PRPF8-208ENST00000573716 FAM182BQ5T319 152 aa18.24■□□□□ 0.51
PRPF8-208ENST00000573716 PMFBP1Q8TBY8 1022 aa18.24■□□□□ 0.51
PRPF8-208ENST00000573716 SBNO1A3KN83 1393 aa18.24■□□□□ 0.51
PRPF8-208ENST00000573716 RGPD1P0DJD0 1748 aa18.23■□□□□ 0.51
PRPF8-208ENST00000573716 NRXN1Q9ULB1 1477 aa18.23■□□□□ 0.51
PRPF8-208ENST00000573716 BTG4Q9NY30 223 aa18.23■□□□□ 0.51
PRPF8-208ENST00000573716 NRAPQ86VF7 1730 aa18.23■□□□□ 0.51
PRPF8-208ENST00000573716 R3HDM1Q15032 1099 aaKnown RBP18.22■□□□□ 0.51
PRPF8-208ENST00000573716 PRAM1Q96QH2 718 aa18.2■□□□□ 0.5
PRPF8-208ENST00000573716 DHX57Q6P158 1386 aaKnown RBP18.19■□□□□ 0.5
PRPF8-208ENST00000573716 POGKQ9P215 609 aa18.19■□□□□ 0.5
PRPF8-208ENST00000573716 COL14A1Q05707 1796 aaKnown RBP18.19■□□□□ 0.5
PRPF8-208ENST00000573716 CFAP70Q5T0N1 1121 aa18.18■□□□□ 0.5
PRPF8-208ENST00000573716 SIRT1Q96EB6 747 aa18.18■□□□□ 0.5
PRPF8-208ENST00000573716 MPHOSPH9Q99550 1183 aa18.17■□□□□ 0.5
PRPF8-208ENST00000573716 C14orf93Q9H972 538 aaKnown RBP18.17■□□□□ 0.5
PRPF8-208ENST00000573716 TRPM3Q9HCF6 1732 aaPredicted RBP18.16■□□□□ 0.5
PRPF8-208ENST00000573716 TNS1Q9HBL0 1735 aaKnown RBP18.15■□□□□ 0.5
PRPF8-208ENST00000573716 HIRIP3Q9BW71 556 aaPredicted RBP18.15■□□□□ 0.5
PRPF8-208ENST00000573716 GPRASP1Q5JY77 1395 aa18.15■□□□□ 0.5
PRPF8-208ENST00000573716 PAK3O75914 559 aaPredicted RBP18.14■□□□□ 0.49
PRPF8-208ENST00000573716 EZH2Q15910 746 aaKnown RBP18.14■□□□□ 0.49
PRPF8-208ENST00000573716 ALS2Q96Q42 1657 aa18.14■□□□□ 0.49
PRPF8-208ENST00000573716 SPATA31A5Q5VU36 1347 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms