RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 DDIT3P35638 169 aa21.27■■□□□ 1
LITAF-209ENST00000571688 DNAJC5BQ9UF47 199 aa21.26■□□□□ 0.99
LITAF-209ENST00000571688 TPM2P07951 284 aa21.25■□□□□ 0.99
LITAF-209ENST00000571688 JPH4Q96JJ6 628 aa21.25■□□□□ 0.99
LITAF-209ENST00000571688 SHROOM2Q13796 1616 aa21.25■□□□□ 0.99
LITAF-209ENST00000571688 IQSEC2Q5JU85 1478 aa21.25■□□□□ 0.99
LITAF-209ENST00000571688 MFAP1P55081 439 aaKnown RBP21.25■□□□□ 0.99
LITAF-209ENST00000571688 HSCBQ8IWL3 235 aa21.24■□□□□ 0.99
LITAF-209ENST00000571688 TRIM44Q96DX7 344 aaPredicted RBP21.24■□□□□ 0.99
LITAF-209ENST00000571688 PHF23Q9BUL5 403 aaPredicted RBP21.24■□□□□ 0.99
LITAF-209ENST00000571688 KIAA1210Q9ULL0 1709 aa21.22■□□□□ 0.99
LITAF-209ENST00000571688 GAS2L3Q86XJ1 694 aa21.21■□□□□ 0.99
LITAF-209ENST00000571688 MVPQ14764 893 aaKnown RBP21.2■□□□□ 0.98
LITAF-209ENST00000571688 WDR63Q8IWG1 891 aa21.2■□□□□ 0.98
LITAF-209ENST00000571688 STAC3Q96MF2 364 aa21.2■□□□□ 0.98
LITAF-209ENST00000571688 CARD14Q9BXL6 1004 aa21.2■□□□□ 0.98
LITAF-209ENST00000571688 KANK1Q14678 1352 aa21.2■□□□□ 0.98
LITAF-209ENST00000571688 ERVK-7P63135 1459 aa21.19■□□□□ 0.98
LITAF-209ENST00000571688 CHMP7Q8WUX9 453 aaPredicted RBP21.19■□□□□ 0.98
LITAF-209ENST00000571688 RUNDC1Q96C34 613 aa21.19■□□□□ 0.98
LITAF-209ENST00000571688 BCL2L13Q9BXK5 485 aa21.19■□□□□ 0.98
LITAF-209ENST00000571688 TNPO1Q92973 898 aaKnown RBP21.18■□□□□ 0.98
LITAF-209ENST00000571688 SNX21Q969T3 373 aa21.18■□□□□ 0.98
LITAF-209ENST00000571688 TRPM2O94759 1503 aa21.18■□□□□ 0.98
LITAF-209ENST00000571688 PDCL3Q9H2J4 239 aa21.18■□□□□ 0.98
LITAF-209ENST00000571688 CIZ1Q9ULV3 898 aaPredicted RBP21.18■□□□□ 0.98
LITAF-209ENST00000571688 ARHGAP5Q13017 1502 aa21.17■□□□□ 0.98
LITAF-209ENST00000571688 SMC5Q8IY18 1101 aa21.17■□□□□ 0.98
LITAF-209ENST00000571688 SKOR2Q2VWA4 1001 aaPredicted RBP21.16■□□□□ 0.98
LITAF-209ENST00000571688 RBM25P49756 843 aaKnown RBP21.16■□□□□ 0.98
LITAF-209ENST00000571688 NEUROD2Q15784 382 aa21.16■□□□□ 0.98
LITAF-209ENST00000571688 RRP7AQ9Y3A4 280 aaKnown RBP21.16■□□□□ 0.98
LITAF-209ENST00000571688 TCP11L2Q8N4U5 519 aa21.15■□□□□ 0.98
LITAF-209ENST00000571688 GBP4Q96PP9 640 aa21.15■□□□□ 0.98
LITAF-209ENST00000571688 PTMSP20962 102 aa21.14■□□□□ 0.98
LITAF-209ENST00000571688 HDAC1Q13547 482 aaPredicted RBP21.14■□□□□ 0.98
LITAF-209ENST00000571688 RAB3GAP1Q15042 981 aa21.14■□□□□ 0.98
LITAF-209ENST00000571688 CCDC27Q2M243 656 aa21.14■□□□□ 0.97
LITAF-209ENST00000571688 CLTCL1P53675 1640 aa21.14■□□□□ 0.97
LITAF-209ENST00000571688 SLC24A1O60721 1099 aa21.13■□□□□ 0.97
LITAF-209ENST00000571688 CCDC173Q0VFZ6 552 aa21.12■□□□□ 0.97
LITAF-209ENST00000571688 PPP1R9BQ96SB3 815 aa21.12■□□□□ 0.97
LITAF-209ENST00000571688 ZKSCAN2Q63HK3 967 aa21.12■□□□□ 0.97
LITAF-209ENST00000571688 KIAA1211Q6ZU35 1233 aa21.11■□□□□ 0.97
LITAF-209ENST00000571688 DZIP1LQ8IYY4 767 aaKnown RBP21.11■□□□□ 0.97
LITAF-209ENST00000571688 ERCC6Q03468 1493 aa21.11■□□□□ 0.97
LITAF-209ENST00000571688 PTPRTO14522 1441 aa21.1■□□□□ 0.97
LITAF-209ENST00000571688 FTSJ3Q8IY81 847 aaKnown RBP21.09■□□□□ 0.97
LITAF-209ENST00000571688 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.09■□□□□ 0.97
LITAF-209ENST00000571688 NCBP3Q53F19 620 aaKnown RBP21.08■□□□□ 0.97
LITAF-209ENST00000571688 ZSCAN30Q86W11 494 aa21.08■□□□□ 0.97
LITAF-209ENST00000571688 OFD1O75665 1012 aa21.08■□□□□ 0.96
LITAF-209ENST00000571688 MYO3AQ8NEV4 1616 aa21.07■□□□□ 0.96
LITAF-209ENST00000571688 HSP90AB1P08238 724 aaKnown RBP21.07■□□□□ 0.96
LITAF-209ENST00000571688 IBTKQ9P2D0 1353 aaPredicted RBP21.06■□□□□ 0.96
LITAF-209ENST00000571688 TERF1P54274 439 aa21.06■□□□□ 0.96
LITAF-209ENST00000571688 ABCA6Q8N139 1617 aa21.06■□□□□ 0.96
LITAF-209ENST00000571688 ZNF518AQ6AHZ1 1483 aa21.05■□□□□ 0.96
LITAF-209ENST00000571688 CT47B1P0C2W7 299 aaPredicted RBP21.05■□□□□ 0.96
LITAF-209ENST00000571688 ADGRB2O60241 1585 aa21.05■□□□□ 0.96
LITAF-209ENST00000571688 NASPP49321 788 aaPredicted RBP21.05■□□□□ 0.96
LITAF-209ENST00000571688 FBLN2P98095 1184 aa21.05■□□□□ 0.96
LITAF-209ENST00000571688 DDX19BQ9UMR2 479 aa21.05■□□□□ 0.96
LITAF-209ENST00000571688 NEURL4Q96JN8 1562 aa21.04■□□□□ 0.96
LITAF-209ENST00000571688 MORC1Q86VD1 984 aa21.04■□□□□ 0.96
LITAF-209ENST00000571688 MAP3K4Q9Y6R4 1608 aa21.04■□□□□ 0.96
LITAF-209ENST00000571688 NSD3Q9BZ95 1437 aa21.04■□□□□ 0.96
LITAF-209ENST00000571688 CALD1Q05682 793 aaKnown RBP21.04■□□□□ 0.96
LITAF-209ENST00000571688 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.03■□□□□ 0.96
LITAF-209ENST00000571688 SBNO2Q9Y2G9 1366 aa21.03■□□□□ 0.96
LITAF-209ENST00000571688 TRIM27P14373 513 aa21.03■□□□□ 0.96
LITAF-209ENST00000571688 KIF2CQ99661 725 aa21.03■□□□□ 0.96
LITAF-209ENST00000571688 CLEC17AQ6ZS10 378 aa21.02■□□□□ 0.96
LITAF-209ENST00000571688 USP32Q8NFA0 1604 aa21.01■□□□□ 0.95
LITAF-209ENST00000571688 ADGRL1O94910 1474 aa21.01■□□□□ 0.95
LITAF-209ENST00000571688 MYOM2P54296 1465 aa21.01■□□□□ 0.95
LITAF-209ENST00000571688 ARHGAP31Q2M1Z3 1444 aa21.01■□□□□ 0.95
LITAF-209ENST00000571688 RIPK4P57078 832 aa21.01■□□□□ 0.95
LITAF-209ENST00000571688 CFAP74Q9C0B2 1584 aa21■□□□□ 0.95
LITAF-209ENST00000571688 NUCB1Q02818 461 aa21■□□□□ 0.95
LITAF-209ENST00000571688 KLHL40Q2TBA0 621 aa20.99■□□□□ 0.95
LITAF-209ENST00000571688 CFAP70Q5T0N1 1121 aa20.99■□□□□ 0.95
LITAF-209ENST00000571688 ITPRIPQ8IWB1 547 aa20.99■□□□□ 0.95
LITAF-209ENST00000571688 SMC4Q9NTJ3 1288 aa20.99■□□□□ 0.95
LITAF-209ENST00000571688 TET3O43151 1660 aa20.99■□□□□ 0.95
LITAF-209ENST00000571688 MSNP26038 577 aaKnown RBP20.99■□□□□ 0.95
LITAF-209ENST00000571688 ANP32BQ92688 251 aaKnown RBP20.99■□□□□ 0.95
LITAF-209ENST00000571688 CD2BP2O95400 341 aaKnown RBP20.98■□□□□ 0.95
LITAF-209ENST00000571688 K7ELQ4 463 aaPredicted RBP20.98■□□□□ 0.95
LITAF-209ENST00000571688 TNNT2P45379 298 aaPredicted RBP20.98■□□□□ 0.95
LITAF-209ENST00000571688 ATF7IPQ6VMQ6 1270 aa20.98■□□□□ 0.95
LITAF-209ENST00000571688 DEPDC5O75140 1603 aa20.97■□□□□ 0.95
LITAF-209ENST00000571688 GOLGA6L22H0YM25 854 aa20.97■□□□□ 0.95
LITAF-209ENST00000571688 HS1BP3Q53T59 392 aa20.97■□□□□ 0.95
LITAF-209ENST00000571688 ZBTB40Q9NUA8 1239 aa20.97■□□□□ 0.95
LITAF-209ENST00000571688 SSFA2P28290 1259 aa20.96■□□□□ 0.95
LITAF-209ENST00000571688 MTHFSP49914 203 aa20.96■□□□□ 0.95
LITAF-209ENST00000571688 BMP2KLQ5H9B9 411 aa20.96■□□□□ 0.95
LITAF-209ENST00000571688 IFT172Q9UG01 1749 aa20.96■□□□□ 0.95
LITAF-209ENST00000571688 SSH1Q8WYL5 1049 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms