RNA–Protein interactions for RNA: ENST00000570513.5

CALCOCO2-225, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-225ENST00000570513 TULP4Q9NRJ4 1543 aa16.13■□□□□ 0.17
CALCOCO2-225ENST00000570513 CHD2O14647 1828 aaKnown RBP16.12■□□□□ 0.17
CALCOCO2-225ENST00000570513 CCDC7Q96M83 1385 aa16.12■□□□□ 0.17
CALCOCO2-225ENST00000570513 SAFB2Q14151 953 aaKnown RBP eCLIP16.11■□□□□ 0.17
CALCOCO2-225ENST00000570513 POGKQ9P215 609 aa16.11■□□□□ 0.17
CALCOCO2-225ENST00000570513 AMOTL2Q9Y2J4 779 aa16.11■□□□□ 0.17
CALCOCO2-225ENST00000570513 NKTRP30414 1462 aaKnown RBP16.1■□□□□ 0.17
CALCOCO2-225ENST00000570513 C11orf95C9JLR9 678 aaPredicted RBP16.1■□□□□ 0.17
CALCOCO2-225ENST00000570513 KCNA6P17658 529 aa16.1■□□□□ 0.17
CALCOCO2-225ENST00000570513 KIF7Q2M1P5 1343 aa16.1■□□□□ 0.17
CALCOCO2-225ENST00000570513 WASHC2AQ641Q2 1341 aa16.1■□□□□ 0.17
CALCOCO2-225ENST00000570513 ADGRB2O60241 1585 aa16.09■□□□□ 0.17
CALCOCO2-225ENST00000570513 WAPLQ7Z5K2 1190 aa16.09■□□□□ 0.17
CALCOCO2-225ENST00000570513 TMF1P82094 1093 aa16.08■□□□□ 0.16
CALCOCO2-225ENST00000570513 DCAF8L1A6NGE4 600 aa16.07■□□□□ 0.16
CALCOCO2-225ENST00000570513 SIRT1Q96EB6 747 aa16.07■□□□□ 0.16
CALCOCO2-225ENST00000570513 MINK1Q8N4C8 1332 aaPredicted RBP16.07■□□□□ 0.16
CALCOCO2-225ENST00000570513 STRCP1A6NGW2 1772 aa16.07■□□□□ 0.16
CALCOCO2-225ENST00000570513 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.06■□□□□ 0.16
CALCOCO2-225ENST00000570513 POLR3GLQ9BT43 218 aa16.05■□□□□ 0.16
CALCOCO2-225ENST00000570513 NALCNQ8IZF0 1738 aa16.05■□□□□ 0.16
CALCOCO2-225ENST00000570513 MYOM1P52179 1685 aa16.04■□□□□ 0.16
CALCOCO2-225ENST00000570513 EVC2Q86UK5 1308 aa16.02■□□□□ 0.16
CALCOCO2-225ENST00000570513 CDC42BPGQ6DT37 1551 aa16.02■□□□□ 0.16
CALCOCO2-225ENST00000570513 ADGRL3Q9HAR2 1447 aa16.02■□□□□ 0.15
CALCOCO2-225ENST00000570513 ZNF335Q9H4Z2 1342 aaPredicted RBP16.01■□□□□ 0.15
CALCOCO2-225ENST00000570513 SLC24A1O60721 1099 aa16■□□□□ 0.15
CALCOCO2-225ENST00000570513 CDCA8Q53HL2 280 aa16■□□□□ 0.15
CALCOCO2-225ENST00000570513 NCBP3Q53F19 620 aaKnown RBP15.99■□□□□ 0.15
CALCOCO2-225ENST00000570513 DDX10Q13206 875 aaKnown RBP15.98■□□□□ 0.15
CALCOCO2-225ENST00000570513 RBM33Q96EV2 1170 aaKnown RBP15.98■□□□□ 0.15
CALCOCO2-225ENST00000570513 TMEM94Q12767 1356 aa15.98■□□□□ 0.15
CALCOCO2-225ENST00000570513 ATP7BP35670 1465 aa15.97■□□□□ 0.15
CALCOCO2-225ENST00000570513 WASLO00401 505 aaPredicted RBP15.97■□□□□ 0.15
CALCOCO2-225ENST00000570513 SRPK2P78362 688 aaKnown RBP15.97■□□□□ 0.15
CALCOCO2-225ENST00000570513 PROSER2Q86WR7 435 aaPredicted RBP15.97■□□□□ 0.15
CALCOCO2-225ENST00000570513 CABP2Q9NPB3 220 aa15.97■□□□□ 0.15
CALCOCO2-225ENST00000570513 ATAD2Q6PL18 1390 aa15.97■□□□□ 0.15
CALCOCO2-225ENST00000570513 FMN2Q9NZ56 1722 aa15.97■□□□□ 0.15
CALCOCO2-225ENST00000570513 LRRC7Q96NW7 1537 aa15.96■□□□□ 0.15
CALCOCO2-225ENST00000570513 CDK19Q9BWU1 502 aa15.96■□□□□ 0.15
CALCOCO2-225ENST00000570513 TOPAZ1Q8N9V7 1692 aa15.95■□□□□ 0.14
CALCOCO2-225ENST00000570513 USP32Q8NFA0 1604 aa15.95■□□□□ 0.14
CALCOCO2-225ENST00000570513 C14orf37Q86TY3 774 aa15.94■□□□□ 0.14
CALCOCO2-225ENST00000570513 PRR36Q9H6K5 1346 aa15.94■□□□□ 0.14
CALCOCO2-225ENST00000570513 PUS7Q96PZ0 661 aaKnown RBP15.93■□□□□ 0.14
CALCOCO2-225ENST00000570513 XIRP1Q702N8 1843 aaKnown RBP15.93■□□□□ 0.14
CALCOCO2-225ENST00000570513 NCOA3Q9Y6Q9 1424 aa15.93■□□□□ 0.14
CALCOCO2-225ENST00000570513 NINLQ9Y2I6 1382 aa15.92■□□□□ 0.14
CALCOCO2-225ENST00000570513 DIEXFQ68CQ4 756 aaKnown RBP15.92■□□□□ 0.14
CALCOCO2-225ENST00000570513 LTBP4Q8N2S1 1624 aa15.92■□□□□ 0.14
CALCOCO2-225ENST00000570513 ANKARQ7Z5J8 1434 aa15.92■□□□□ 0.14
CALCOCO2-225ENST00000570513 RNF39Q9H2S5 420 aa15.91■□□□□ 0.14
CALCOCO2-225ENST00000570513 DCCP43146 1447 aa15.91■□□□□ 0.14
CALCOCO2-225ENST00000570513 PPIP5K1Q6PFW1 1433 aa15.91■□□□□ 0.14
CALCOCO2-225ENST00000570513 ITSN1Q15811 1721 aa15.91■□□□□ 0.14
CALCOCO2-225ENST00000570513 TMC1Q8TDI8 760 aa15.9■□□□□ 0.14
CALCOCO2-225ENST00000570513 NUTM2FA1L443 756 aa15.89■□□□□ 0.13
CALCOCO2-225ENST00000570513 CACNB1Q02641 598 aaPredicted RBP15.89■□□□□ 0.13
CALCOCO2-225ENST00000570513 NUDT16Q96DE0 195 aaKnown RBP15.89■□□□□ 0.13
CALCOCO2-225ENST00000570513 CD163L1Q9NR16 1453 aa15.89■□□□□ 0.13
CALCOCO2-225ENST00000570513 MSH6P52701 1360 aa15.88■□□□□ 0.13
CALCOCO2-225ENST00000570513 SLC12A5Q9H2X9 1139 aa15.88■□□□□ 0.13
CALCOCO2-225ENST00000570513 ANKRD36BQ8N2N9 1353 aa15.87■□□□□ 0.13
CALCOCO2-225ENST00000570513 PANK3Q9H999 370 aa15.87■□□□□ 0.13
CALCOCO2-225ENST00000570513 A0A1W2PP64 1363 aa15.87■□□□□ 0.13
CALCOCO2-225ENST00000570513 C19orf44Q9H6X5 657 aa15.86■□□□□ 0.13
CALCOCO2-225ENST00000570513 MST1RQ04912 1400 aa15.85■□□□□ 0.13
CALCOCO2-225ENST00000570513 NSD3Q9BZ95 1437 aa15.85■□□□□ 0.13
CALCOCO2-225ENST00000570513 CCDC61Q9Y6R9 512 aa15.85■□□□□ 0.13
CALCOCO2-225ENST00000570513 RGPD8O14715 1765 aaPredicted RBP15.85■□□□□ 0.13
CALCOCO2-225ENST00000570513 CABP1Q9NZU7 370 aa15.84■□□□□ 0.13
CALCOCO2-225ENST00000570513 MON2Q7Z3U7 1717 aa15.84■□□□□ 0.13
CALCOCO2-225ENST00000570513 C1orf167Q5SNV9 1468 aa15.84■□□□□ 0.13
CALCOCO2-225ENST00000570513 AKAP12Q02952 1782 aa15.83■□□□□ 0.12
CALCOCO2-225ENST00000570513 ATF3P18847 181 aa15.83■□□□□ 0.12
CALCOCO2-225ENST00000570513 NRKQ7Z2Y5 1582 aa15.83■□□□□ 0.12
CALCOCO2-225ENST00000570513 TERF2IPQ9NYB0 399 aa15.82■□□□□ 0.12
CALCOCO2-225ENST00000570513 CPSF1Q10570 1443 aaKnown RBP15.82■□□□□ 0.12
CALCOCO2-225ENST00000570513 KIF1AQ12756 1690 aa15.82■□□□□ 0.12
CALCOCO2-225ENST00000570513 CADPS2Q86UW7 1296 aa15.81■□□□□ 0.12
CALCOCO2-225ENST00000570513 CARD14Q9BXL6 1004 aa15.81■□□□□ 0.12
CALCOCO2-225ENST00000570513 POLR3AO14802 1390 aaPredicted RBP15.8■□□□□ 0.12
CALCOCO2-225ENST00000570513 HDGFL2Q7Z4V5 671 aaPredicted RBP15.8■□□□□ 0.12
CALCOCO2-225ENST00000570513 KTN1Q86UP2 1357 aaKnown RBP15.79■□□□□ 0.12
CALCOCO2-225ENST00000570513 ACEP12821 1306 aa15.79■□□□□ 0.12
CALCOCO2-225ENST00000570513 PLEKHG3A1L390 1219 aa15.79■□□□□ 0.12
CALCOCO2-225ENST00000570513 PER1O15534 1290 aaPredicted RBP15.79■□□□□ 0.12
CALCOCO2-225ENST00000570513 USP6P35125 1406 aa15.78■□□□□ 0.12
CALCOCO2-225ENST00000570513 EDC4Q6P2E9 1401 aaKnown RBP15.78■□□□□ 0.12
CALCOCO2-225ENST00000570513 PMFBP1Q8TBY8 1022 aa15.78■□□□□ 0.12
CALCOCO2-225ENST00000570513 KNSTRNQ9Y448 316 aa15.78■□□□□ 0.12
CALCOCO2-225ENST00000570513 ESCO1Q5FWF5 840 aa15.77■□□□□ 0.12
CALCOCO2-225ENST00000570513 PHF8Q9UPP1 1060 aa15.77■□□□□ 0.12
CALCOCO2-225ENST00000570513 KIF20BQ96Q89 1820 aa15.76■□□□□ 0.11
CALCOCO2-225ENST00000570513 CNGB1Q14028 1251 aaPredicted RBP15.76■□□□□ 0.11
CALCOCO2-225ENST00000570513 AMER1Q5JTC6 1135 aaPredicted RBP15.76■□□□□ 0.11
CALCOCO2-225ENST00000570513 NGDNQ8NEJ9 315 aaKnown RBP15.76■□□□□ 0.11
CALCOCO2-225ENST00000570513 ORAI2Q96SN7 254 aa15.76■□□□□ 0.11
CALCOCO2-225ENST00000570513 NPC1L1Q9UHC9 1359 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 167.4 ms