RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 ANKRD30BQ9BXX2 1392 aa28.12■■■□□ 2.09
ABCA3-204ENST00000566200 C8orf37Q96NL8 207 aa28.12■■■□□ 2.09
ABCA3-204ENST00000566200 PIK3C2GO75747 1445 aa28.11■■■□□ 2.09
ABCA3-204ENST00000566200 COL22A1Q8NFW1 1626 aaPredicted RBP28.1■■■□□ 2.09
ABCA3-204ENST00000566200 LRPPRCP42704 1394 aaKnown RBP28.1■■■□□ 2.09
ABCA3-204ENST00000566200 UPF1Q92900 1129 aaKnown RBP eCLIP28.09■■■□□ 2.09
ABCA3-204ENST00000566200 WAPLQ7Z5K2 1190 aa28.08■■■□□ 2.09
ABCA3-204ENST00000566200 STK26Q9P289 416 aa28.08■■■□□ 2.09
ABCA3-204ENST00000566200 TMEM132EQ6IEE7 984 aa28.07■■■□□ 2.08
ABCA3-204ENST00000566200 PLEKHH1Q9ULM0 1364 aa28.07■■■□□ 2.08
ABCA3-204ENST00000566200 ADAMTS2O95450 1211 aa28.06■■■□□ 2.08
ABCA3-204ENST00000566200 ABCC11Q96J66 1382 aa28.06■■■□□ 2.08
ABCA3-204ENST00000566200 PXDNQ92626 1479 aa28.06■■■□□ 2.08
ABCA3-204ENST00000566200 RGS12O14924 1447 aa28.05■■■□□ 2.08
ABCA3-204ENST00000566200 ESCO1Q5FWF5 840 aa28.04■■■□□ 2.08
ABCA3-204ENST00000566200 FMN2Q9NZ56 1722 aa28.04■■■□□ 2.08
ABCA3-204ENST00000566200 QTRT2Q9H974 415 aaKnown RBP28.03■■■□□ 2.08
ABCA3-204ENST00000566200 YTHDC2Q9H6S0 1430 aaKnown RBP28.02■■■□□ 2.08
ABCA3-204ENST00000566200 NRXN1Q9ULB1 1477 aa28.02■■■□□ 2.08
ABCA3-204ENST00000566200 NGLY1Q96IV0 654 aa28.01■■■□□ 2.07
ABCA3-204ENST00000566200 MYOM2P54296 1465 aa28.01■■■□□ 2.07
ABCA3-204ENST00000566200 NPHP3Q7Z494 1330 aa28■■■□□ 2.07
ABCA3-204ENST00000566200 RBM6P78332 1123 aaKnown RBP28■■■□□ 2.07
ABCA3-204ENST00000566200 NUTM2FA1L443 756 aa27.99■■■□□ 2.07
ABCA3-204ENST00000566200 FOXO3O43524 673 aa27.97■■■□□ 2.07
ABCA3-204ENST00000566200 XPCQ01831 940 aaPredicted RBP27.97■■■□□ 2.07
ABCA3-204ENST00000566200 MARF1Q9Y4F3 1742 aaKnown RBP27.97■■■□□ 2.07
ABCA3-204ENST00000566200 C14orf93Q9H972 538 aaKnown RBP27.96■■■□□ 2.07
ABCA3-204ENST00000566200 RAB3GAP2Q9H2M9 1393 aa27.95■■■□□ 2.06
ABCA3-204ENST00000566200 ACIN1Q9UKV3 1341 aaKnown RBP27.94■■■□□ 2.06
ABCA3-204ENST00000566200 FNBP4Q8N3X1 1017 aaPredicted RBP27.94■■■□□ 2.06
ABCA3-204ENST00000566200 RGPD8O14715 1765 aaPredicted RBP27.94■■■□□ 2.06
ABCA3-204ENST00000566200 CFAP70Q5T0N1 1121 aa27.93■■■□□ 2.06
ABCA3-204ENST00000566200 USP21Q9UK80 565 aa27.93■■■□□ 2.06
ABCA3-204ENST00000566200 KIF1AQ12756 1690 aa27.93■■■□□ 2.06
ABCA3-204ENST00000566200 SIRT1Q96EB6 747 aa27.92■■■□□ 2.06
ABCA3-204ENST00000566200 ATRNO75882 1429 aa27.91■■■□□ 2.06
ABCA3-204ENST00000566200 BCL9LQ86UU0 1499 aa27.88■■■□□ 2.05
ABCA3-204ENST00000566200 TRPC5Q9UL62 973 aaPredicted RBP27.87■■■□□ 2.05
ABCA3-204ENST00000566200 DHX57Q6P158 1386 aaKnown RBP27.86■■■□□ 2.05
ABCA3-204ENST00000566200 SPATA31A3Q5VYP0 1347 aa27.85■■■□□ 2.05
ABCA3-204ENST00000566200 ADGRB1O14514 1584 aa27.85■■■□□ 2.05
ABCA3-204ENST00000566200 DLC1Q96QB1 1528 aa27.83■■■□□ 2.05
ABCA3-204ENST00000566200 USP32Q8NFA0 1604 aa27.82■■■□□ 2.04
ABCA3-204ENST00000566200 PRAM1Q96QH2 718 aa27.82■■■□□ 2.04
ABCA3-204ENST00000566200 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.81■■■□□ 2.04
ABCA3-204ENST00000566200 SAFB2Q14151 953 aaKnown RBP eCLIP27.8■■■□□ 2.04
ABCA3-204ENST00000566200 KRT28Q7Z3Y7 464 aa27.8■■■□□ 2.04
ABCA3-204ENST00000566200 ADGRB2O60241 1585 aa27.79■■■□□ 2.04
ABCA3-204ENST00000566200 PHF8Q9UPP1 1060 aa27.78■■■□□ 2.04
ABCA3-204ENST00000566200 SLIT2O94813 1529 aa27.77■■■□□ 2.04
ABCA3-204ENST00000566200 TNS3Q68CZ2 1445 aa27.76■■■□□ 2.04
ABCA3-204ENST00000566200 ATAD2Q6PL18 1390 aa27.76■■■□□ 2.03
ABCA3-204ENST00000566200 ABCA3Q99758 1704 aa27.76■■■□□ 2.03
ABCA3-204ENST00000566200 GLI3P10071 1580 aa27.73■■■□□ 2.03
ABCA3-204ENST00000566200 ANKARQ7Z5J8 1434 aa27.73■■■□□ 2.03
ABCA3-204ENST00000566200 GJD4Q96KN9 370 aaPredicted RBP27.72■■■□□ 2.03
ABCA3-204ENST00000566200 POGKQ9P215 609 aa27.72■■■□□ 2.03
ABCA3-204ENST00000566200 TRAK1Q9UPV9 953 aa27.71■■■□□ 2.03
ABCA3-204ENST00000566200 SBNO1A3KN83 1393 aa27.71■■■□□ 2.03
ABCA3-204ENST00000566200 CABLES1Q8TDN4 633 aa27.7■■■□□ 2.02
ABCA3-204ENST00000566200 KDM2AQ9Y2K7 1162 aa27.7■■■□□ 2.02
ABCA3-204ENST00000566200 RALGAPBQ86X10 1494 aa27.7■■■□□ 2.02
ABCA3-204ENST00000566200 TRPM3Q9HCF6 1732 aaPredicted RBP27.7■■■□□ 2.02
ABCA3-204ENST00000566200 EP400Q96L91 3159 aa27.69■■■□□ 2.02
ABCA3-204ENST00000566200 PLCH1Q4KWH8 1693 aa27.69■■■□□ 2.02
ABCA3-204ENST00000566200 PSME1Q06323 249 aa27.69■■■□□ 2.02
ABCA3-204ENST00000566200 UNC5CLQ8IV45 518 aa27.69■■■□□ 2.02
ABCA3-204ENST00000566200 DCAF11Q8TEB1 546 aa27.69■■■□□ 2.02
ABCA3-204ENST00000566200 PMFBP1Q8TBY8 1022 aa27.67■■■□□ 2.02
ABCA3-204ENST00000566200 HIRIP3Q9BW71 556 aaPredicted RBP27.67■■■□□ 2.02
ABCA3-204ENST00000566200 HRCP23327 699 aa27.66■■■□□ 2.02
ABCA3-204ENST00000566200 PRR36Q9H6K5 1346 aa27.66■■■□□ 2.02
ABCA3-204ENST00000566200 NWD2Q9ULI1 1742 aa27.65■■■□□ 2.02
ABCA3-204ENST00000566200 MINK1Q8N4C8 1332 aaPredicted RBP27.65■■■□□ 2.02
ABCA3-204ENST00000566200 BRWD3Q6RI45 1802 aa27.64■■■□□ 2.02
ABCA3-204ENST00000566200 ARHGEF28Q8N1W1 1705 aaKnown RBP27.64■■■□□ 2.02
ABCA3-204ENST00000566200 TULP4Q9NRJ4 1543 aa27.64■■■□□ 2.02
ABCA3-204ENST00000566200 ALS2Q96Q42 1657 aa27.64■■■□□ 2.02
ABCA3-204ENST00000566200 ARHGEF10O15013 1369 aa27.63■■■□□ 2.01
ABCA3-204ENST00000566200 PLEKHG5O94827 1062 aa27.63■■■□□ 2.01
ABCA3-204ENST00000566200 HAP1P54257 671 aaPredicted RBP27.61■■■□□ 2.01
ABCA3-204ENST00000566200 LMOD2Q6P5Q4 547 aa27.61■■■□□ 2.01
ABCA3-204ENST00000566200 STAC3Q96MF2 364 aa27.6■■■□□ 2.01
ABCA3-204ENST00000566200 CRYBG1Q9Y4K1 1723 aa27.58■■■□□ 2.01
ABCA3-204ENST00000566200 WASLO00401 505 aaPredicted RBP27.58■■■□□ 2.01
ABCA3-204ENST00000566200 NRAPQ86VF7 1730 aa27.58■■■□□ 2.01
ABCA3-204ENST00000566200 VPS72Q15906 364 aa27.57■■■□□ 2
ABCA3-204ENST00000566200 EIF3AQ14152 1382 aaKnown RBP27.57■■■□□ 2
ABCA3-204ENST00000566200 FAM83GA6ND36 823 aa27.56■■■□□ 2
ABCA3-204ENST00000566200 ITSN1Q15811 1721 aa27.53■■■□□ 2
ABCA3-204ENST00000566200 ATP7BP35670 1465 aa27.53■■■□□ 2
ABCA3-204ENST00000566200 CCDC125Q86Z20 511 aa27.53■■■□□ 2
ABCA3-204ENST00000566200 GPRASP1Q5JY77 1395 aa27.52■■■□□ 2
ABCA3-204ENST00000566200 KIAA1210Q9ULL0 1709 aa27.51■■□□□ 1.99
ABCA3-204ENST00000566200 SEPT12Q8IYM1 358 aa27.51■■□□□ 1.99
ABCA3-204ENST00000566200 COL14A1Q05707 1796 aaKnown RBP27.5■■□□□ 1.99
ABCA3-204ENST00000566200 ONECUT3O60422 494 aaPredicted RBP27.5■■□□□ 1.99
ABCA3-204ENST00000566200 TOPAZ1Q8N9V7 1692 aa27.48■■□□□ 1.99
ABCA3-204ENST00000566200 BLMP54132 1417 aaPredicted RBP27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms