RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 PARD3Q8TEW0 1356 aa26.32■■□□□ 1.8
PKD1-230ENST00000565639 MINK1Q8N4C8 1332 aaPredicted RBP26.31■■□□□ 1.8
PKD1-230ENST00000565639 ANKLE2Q86XL3 938 aa26.31■■□□□ 1.8
PKD1-230ENST00000565639 WAPLQ7Z5K2 1190 aa26.3■■□□□ 1.8
PKD1-230ENST00000565639 SLC26A8Q96RN1 970 aa26.3■■□□□ 1.8
PKD1-230ENST00000565639 NPC1L1Q9UHC9 1359 aa26.3■■□□□ 1.8
PKD1-230ENST00000565639 PLEKHH1Q9ULM0 1364 aa26.3■■□□□ 1.8
PKD1-230ENST00000565639 NINLQ9Y2I6 1382 aa26.3■■□□□ 1.8
PKD1-230ENST00000565639 ATAD2Q6PL18 1390 aa26.29■■□□□ 1.8
PKD1-230ENST00000565639 MYBBP1AQ9BQG0 1328 aaKnown RBP26.28■■□□□ 1.8
PKD1-230ENST00000565639 MRS2Q9HD23 443 aa26.27■■□□□ 1.8
PKD1-230ENST00000565639 CABP2Q9NPB3 220 aa26.27■■□□□ 1.8
PKD1-230ENST00000565639 SRPK2P78362 688 aaKnown RBP26.26■■□□□ 1.79
PKD1-230ENST00000565639 CNGB1Q14028 1251 aaPredicted RBP26.26■■□□□ 1.79
PKD1-230ENST00000565639 AMER1Q5JTC6 1135 aaPredicted RBP26.26■■□□□ 1.79
PKD1-230ENST00000565639 PIK3R4Q99570 1358 aa26.26■■□□□ 1.79
PKD1-230ENST00000565639 PTPRUQ92729 1446 aa26.26■■□□□ 1.79
PKD1-230ENST00000565639 CCDC184Q52MB2 194 aa26.26■■□□□ 1.79
PKD1-230ENST00000565639 TMC1Q8TDI8 760 aa26.25■■□□□ 1.79
PKD1-230ENST00000565639 SLC12A5Q9H2X9 1139 aa26.25■■□□□ 1.79
PKD1-230ENST00000565639 ROBO2Q9HCK4 1378 aa26.24■■□□□ 1.79
PKD1-230ENST00000565639 CDK19Q9BWU1 502 aa26.24■■□□□ 1.79
PKD1-230ENST00000565639 CC2D1BQ5T0F9 858 aaKnown RBP26.23■■□□□ 1.79
PKD1-230ENST00000565639 CARD14Q9BXL6 1004 aa26.22■■□□□ 1.79
PKD1-230ENST00000565639 PTCH1Q13635 1447 aa26.22■■□□□ 1.79
PKD1-230ENST00000565639 BRD4O60885 1362 aaPredicted RBP26.21■■□□□ 1.79
PKD1-230ENST00000565639 ANKRD36BQ8N2N9 1353 aa26.21■■□□□ 1.79
PKD1-230ENST00000565639 AMOTL2Q9Y2J4 779 aa26.2■■□□□ 1.79
PKD1-230ENST00000565639 XRN1Q8IZH2 1706 aaKnown RBP26.19■■□□□ 1.78
PKD1-230ENST00000565639 NLRP13Q86W25 1043 aa26.19■■□□□ 1.78
PKD1-230ENST00000565639 WASLO00401 505 aaPredicted RBP26.18■■□□□ 1.78
PKD1-230ENST00000565639 ADGRB2O60241 1585 aa26.18■■□□□ 1.78
PKD1-230ENST00000565639 USP32Q8NFA0 1604 aa26.17■■□□□ 1.78
PKD1-230ENST00000565639 NSD3Q9BZ95 1437 aa26.16■■□□□ 1.78
PKD1-230ENST00000565639 NPHP4O75161 1426 aaPredicted RBP26.15■■□□□ 1.78
PKD1-230ENST00000565639 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.13■■□□□ 1.77
PKD1-230ENST00000565639 TERF2IPQ9NYB0 399 aa26.13■■□□□ 1.77
PKD1-230ENST00000565639 A0A1W2PP64 1363 aa26.11■■□□□ 1.77
PKD1-230ENST00000565639 KDM4FA0A1W2PPD8 638 aa26.11■■□□□ 1.77
PKD1-230ENST00000565639 CHD2O14647 1828 aaKnown RBP26.1■■□□□ 1.77
PKD1-230ENST00000565639 CD163L1Q9NR16 1453 aa26.1■■□□□ 1.77
PKD1-230ENST00000565639 CGNL1Q0VF96 1302 aa26.1■■□□□ 1.77
PKD1-230ENST00000565639 ATP7BP35670 1465 aa26.09■■□□□ 1.77
PKD1-230ENST00000565639 FAM9BQ8IZU0 186 aa26.09■■□□□ 1.77
PKD1-230ENST00000565639 PNISRQ8TF01 805 aaKnown RBP26.08■■□□□ 1.77
PKD1-230ENST00000565639 NSD2O96028 1365 aa26.08■■□□□ 1.76
PKD1-230ENST00000565639 CABP1Q9NZU7 370 aa26.07■■□□□ 1.76
PKD1-230ENST00000565639 KCNA6P17658 529 aa26.07■■□□□ 1.76
PKD1-230ENST00000565639 HDGFL2Q7Z4V5 671 aaPredicted RBP26.07■■□□□ 1.76
PKD1-230ENST00000565639 PPP2R1AP30153 589 aa26.06■■□□□ 1.76
PKD1-230ENST00000565639 NUDT16Q96DE0 195 aaKnown RBP26.06■■□□□ 1.76
PKD1-230ENST00000565639 NCKAP5LQ9HCH0 1330 aa26.05■■□□□ 1.76
PKD1-230ENST00000565639 CCDC61Q9Y6R9 512 aa26.05■■□□□ 1.76
PKD1-230ENST00000565639 PPIP5K1Q6PFW1 1433 aa26.03■■□□□ 1.76
PKD1-230ENST00000565639 CPSF1Q10570 1443 aaKnown RBP26■■□□□ 1.75
PKD1-230ENST00000565639 PRR36Q9H6K5 1346 aa26■■□□□ 1.75
PKD1-230ENST00000565639 HNRNPUQ00839 825 aaKnown RBP eCLIP26■■□□□ 1.75
PKD1-230ENST00000565639 CDC42BPGQ6DT37 1551 aa25.99■■□□□ 1.75
PKD1-230ENST00000565639 MORC1Q86VD1 984 aa25.98■■□□□ 1.75
PKD1-230ENST00000565639 TOPAZ1Q8N9V7 1692 aa25.98■■□□□ 1.75
PKD1-230ENST00000565639 NWD1Q149M9 1564 aa25.97■■□□□ 1.75
PKD1-230ENST00000565639 INSRP06213 1382 aa25.94■■□□□ 1.74
PKD1-230ENST00000565639 EDC4Q6P2E9 1401 aaKnown RBP25.94■■□□□ 1.74
PKD1-230ENST00000565639 PLEKHG3A1L390 1219 aa25.94■■□□□ 1.74
PKD1-230ENST00000565639 ZNF692Q9BU19 519 aaPredicted RBP25.94■■□□□ 1.74
PKD1-230ENST00000565639 ANKRD26Q9UPS8 1709 aa25.93■■□□□ 1.74
PKD1-230ENST00000565639 LMTK3Q96Q04 1460 aa25.93■■□□□ 1.74
PKD1-230ENST00000565639 AKAP12Q02952 1782 aa25.93■■□□□ 1.74
PKD1-230ENST00000565639 FYB1O15117 783 aa25.93■■□□□ 1.74
PKD1-230ENST00000565639 ANKARQ7Z5J8 1434 aa25.92■■□□□ 1.74
PKD1-230ENST00000565639 ITSN1Q15811 1721 aa25.92■■□□□ 1.74
PKD1-230ENST00000565639 MON2Q7Z3U7 1717 aa25.92■■□□□ 1.74
PKD1-230ENST00000565639 KIF20BQ96Q89 1820 aa25.91■■□□□ 1.74
PKD1-230ENST00000565639 NALCNQ8IZF0 1738 aa25.9■■□□□ 1.74
PKD1-230ENST00000565639 FMN2Q9NZ56 1722 aa25.9■■□□□ 1.74
PKD1-230ENST00000565639 ADGRL3Q9HAR2 1447 aa25.89■■□□□ 1.73
PKD1-230ENST00000565639 HSPA2P54652 639 aa25.89■■□□□ 1.73
PKD1-230ENST00000565639 NKTRP30414 1462 aaKnown RBP25.88■■□□□ 1.73
PKD1-230ENST00000565639 ZBED9Q6R2W3 1325 aa25.88■■□□□ 1.73
PKD1-230ENST00000565639 POLR3AO14802 1390 aaPredicted RBP25.88■■□□□ 1.73
PKD1-230ENST00000565639 GGNBP2Q9H3C7 697 aa25.87■■□□□ 1.73
PKD1-230ENST00000565639 NUTM2FA1L443 756 aa25.85■■□□□ 1.73
PKD1-230ENST00000565639 ACEP12821 1306 aa25.85■■□□□ 1.73
PKD1-230ENST00000565639 TNNT2P45379 298 aaPredicted RBP25.83■■□□□ 1.73
PKD1-230ENST00000565639 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.83■■□□□ 1.73
PKD1-230ENST00000565639 WDR43Q15061 677 aaKnown RBP eCLIP25.82■■□□□ 1.72
PKD1-230ENST00000565639 BLMP54132 1417 aaPredicted RBP25.82■■□□□ 1.72
PKD1-230ENST00000565639 NRKQ7Z2Y5 1582 aa25.81■■□□□ 1.72
PKD1-230ENST00000565639 RGPD8O14715 1765 aaPredicted RBP25.81■■□□□ 1.72
PKD1-230ENST00000565639 USP6P35125 1406 aa25.81■■□□□ 1.72
PKD1-230ENST00000565639 SCAF1Q9H7N4 1312 aaKnown RBP25.79■■□□□ 1.72
PKD1-230ENST00000565639 STRCQ7RTU9 1775 aa25.79■■□□□ 1.72
PKD1-230ENST00000565639 MTHFSP49914 203 aa25.79■■□□□ 1.72
PKD1-230ENST00000565639 PROSER2Q86WR7 435 aaPredicted RBP25.79■■□□□ 1.72
PKD1-230ENST00000565639 ADAMTS8Q9UP79 889 aa25.78■■□□□ 1.72
PKD1-230ENST00000565639 CFAP53Q96M91 514 aa25.78■■□□□ 1.72
PKD1-230ENST00000565639 TTC21BQ7Z4L5 1316 aa25.77■■□□□ 1.72
PKD1-230ENST00000565639 SSH2Q76I76 1423 aa25.77■■□□□ 1.72
PKD1-230ENST00000565639 NCOA3Q9Y6Q9 1424 aa25.76■■□□□ 1.71
PKD1-230ENST00000565639 NME9Q86XW9 330 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms