RNA–Protein interactions for RNA: ENST00000564240.1

AC004449.1-201, humanhuman

BASIC

Gene AC004449.1, Length 433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004449.1-201ENST00000564240 QTRT2Q9H974 415 aaKnown RBP24.29■■□□□ 1.48
AC004449.1-201ENST00000564240 SETD1AO15047 1707 aaKnown RBP24.27■■□□□ 1.48
AC004449.1-201ENST00000564240 SOS2Q07890 1332 aaPredicted RBP24.25■■□□□ 1.47
AC004449.1-201ENST00000564240 SPATA31E1Q6ZUB1 1445 aa24.24■■□□□ 1.47
AC004449.1-201ENST00000564240 FOXO3O43524 673 aa24.23■■□□□ 1.47
AC004449.1-201ENST00000564240 NPHP3Q7Z494 1330 aa24.23■■□□□ 1.47
AC004449.1-201ENST00000564240 LRPPRCP42704 1394 aaKnown RBP24.22■■□□□ 1.47
AC004449.1-201ENST00000564240 RBM6P78332 1123 aaKnown RBP24.22■■□□□ 1.47
AC004449.1-201ENST00000564240 XPCQ01831 940 aaPredicted RBP24.22■■□□□ 1.47
AC004449.1-201ENST00000564240 UPF1Q92900 1129 aaKnown RBP eCLIP24.21■■□□□ 1.47
AC004449.1-201ENST00000564240 PRAG1Q86YV5 1406 aa24.2■■□□□ 1.46
AC004449.1-201ENST00000564240 ABCC11Q96J66 1382 aa24.19■■□□□ 1.46
AC004449.1-201ENST00000564240 USP21Q9UK80 565 aa24.19■■□□□ 1.46
AC004449.1-201ENST00000564240 CFAP70Q5T0N1 1121 aa24.17■■□□□ 1.46
AC004449.1-201ENST00000564240 C14orf93Q9H972 538 aaKnown RBP24.17■■□□□ 1.46
AC004449.1-201ENST00000564240 DHX57Q6P158 1386 aaKnown RBP24.16■■□□□ 1.46
AC004449.1-201ENST00000564240 PLEKHH1Q9ULM0 1364 aa24.16■■□□□ 1.46
AC004449.1-201ENST00000564240 SAFB2Q14151 953 aaKnown RBP eCLIP24.15■■□□□ 1.46
AC004449.1-201ENST00000564240 YTHDC2Q9H6S0 1430 aaKnown RBP24.15■■□□□ 1.46
AC004449.1-201ENST00000564240 RAB3GAP2Q9H2M9 1393 aa24.15■■□□□ 1.46
AC004449.1-201ENST00000564240 PIK3C2GO75747 1445 aa24.14■■□□□ 1.45
AC004449.1-201ENST00000564240 TRPC5Q9UL62 973 aaPredicted RBP24.14■■□□□ 1.45
AC004449.1-201ENST00000564240 POGKQ9P215 609 aa24.13■■□□□ 1.45
AC004449.1-201ENST00000564240 CDK12Q9NYV4 1490 aaPredicted RBP24.13■■□□□ 1.45
AC004449.1-201ENST00000564240 CDC42BPGQ6DT37 1551 aa24.12■■□□□ 1.45
AC004449.1-201ENST00000564240 TECPR2O15040 1411 aa24.12■■□□□ 1.45
AC004449.1-201ENST00000564240 SIRT1Q96EB6 747 aa24.12■■□□□ 1.45
AC004449.1-201ENST00000564240 KDM2AQ9Y2K7 1162 aa24.12■■□□□ 1.45
AC004449.1-201ENST00000564240 IFT172Q9UG01 1749 aa24.11■■□□□ 1.45
AC004449.1-201ENST00000564240 LAMC1P11047 1609 aa24.1■■□□□ 1.45
AC004449.1-201ENST00000564240 KRT28Q7Z3Y7 464 aa24.1■■□□□ 1.45
AC004449.1-201ENST00000564240 PLEKHG5O94827 1062 aa24.09■■□□□ 1.45
AC004449.1-201ENST00000564240 HAP1P54257 671 aaPredicted RBP24.09■■□□□ 1.45
AC004449.1-201ENST00000564240 PRAM1Q96QH2 718 aa24.09■■□□□ 1.45
AC004449.1-201ENST00000564240 FNBP4Q8N3X1 1017 aaPredicted RBP24.08■■□□□ 1.45
AC004449.1-201ENST00000564240 PSME1Q06323 249 aa24.07■■□□□ 1.44
AC004449.1-201ENST00000564240 LMOD2Q6P5Q4 547 aa24.07■■□□□ 1.44
AC004449.1-201ENST00000564240 DCAF11Q8TEB1 546 aa24.06■■□□□ 1.44
AC004449.1-201ENST00000564240 PHF8Q9UPP1 1060 aa24.06■■□□□ 1.44
AC004449.1-201ENST00000564240 RGS12O14924 1447 aa24.05■■□□□ 1.44
AC004449.1-201ENST00000564240 PXDNQ92626 1479 aa24.05■■□□□ 1.44
AC004449.1-201ENST00000564240 TRAK1Q9UPV9 953 aa24.04■■□□□ 1.44
AC004449.1-201ENST00000564240 KNDC1Q76NI1 1749 aa24.04■■□□□ 1.44
AC004449.1-201ENST00000564240 SPATA31A3Q5VYP0 1347 aa24.03■■□□□ 1.44
AC004449.1-201ENST00000564240 MYOM2P54296 1465 aa24.01■■□□□ 1.43
AC004449.1-201ENST00000564240 PMFBP1Q8TBY8 1022 aa24■■□□□ 1.43
AC004449.1-201ENST00000564240 COL22A1Q8NFW1 1626 aaPredicted RBP23.99■■□□□ 1.43
AC004449.1-201ENST00000564240 FMN2Q9NZ56 1722 aa23.99■■□□□ 1.43
AC004449.1-201ENST00000564240 HIRIP3Q9BW71 556 aaPredicted RBP23.99■■□□□ 1.43
AC004449.1-201ENST00000564240 NRXN1Q9ULB1 1477 aa23.99■■□□□ 1.43
AC004449.1-201ENST00000564240 ATAD2Q6PL18 1390 aa23.97■■□□□ 1.43
AC004449.1-201ENST00000564240 MINK1Q8N4C8 1332 aaPredicted RBP23.97■■□□□ 1.43
AC004449.1-201ENST00000564240 GJD4Q96KN9 370 aaPredicted RBP23.97■■□□□ 1.43
AC004449.1-201ENST00000564240 ATRNO75882 1429 aa23.96■■□□□ 1.43
AC004449.1-201ENST00000564240 CABLES1Q8TDN4 633 aa23.96■■□□□ 1.43
AC004449.1-201ENST00000564240 KIF1AQ12756 1690 aa23.95■■□□□ 1.43
AC004449.1-201ENST00000564240 HRCP23327 699 aa23.95■■□□□ 1.42
AC004449.1-201ENST00000564240 UNC5CLQ8IV45 518 aa23.95■■□□□ 1.42
AC004449.1-201ENST00000564240 STAC3Q96MF2 364 aa23.95■■□□□ 1.42
AC004449.1-201ENST00000564240 RGPD8O14715 1765 aaPredicted RBP23.94■■□□□ 1.42
AC004449.1-201ENST00000564240 BCL9LQ86UU0 1499 aa23.94■■□□□ 1.42
AC004449.1-201ENST00000564240 CCDC9Q9Y3X0 531 aaKnown RBP23.93■■□□□ 1.42
AC004449.1-201ENST00000564240 TNS3Q68CZ2 1445 aa23.9■■□□□ 1.42
AC004449.1-201ENST00000564240 MARF1Q9Y4F3 1742 aaKnown RBP23.9■■□□□ 1.42
AC004449.1-201ENST00000564240 NGDNQ8NEJ9 315 aaKnown RBP23.89■■□□□ 1.41
AC004449.1-201ENST00000564240 SBNO1A3KN83 1393 aa23.89■■□□□ 1.41
AC004449.1-201ENST00000564240 GPRASP1Q5JY77 1395 aa23.89■■□□□ 1.41
AC004449.1-201ENST00000564240 DLC1Q96QB1 1528 aa23.89■■□□□ 1.41
AC004449.1-201ENST00000564240 WASLO00401 505 aaPredicted RBP23.88■■□□□ 1.41
AC004449.1-201ENST00000564240 ARHGEF10O15013 1369 aa23.88■■□□□ 1.41
AC004449.1-201ENST00000564240 PAK3O75914 559 aaPredicted RBP23.87■■□□□ 1.41
AC004449.1-201ENST00000564240 EIF3AQ14152 1382 aaKnown RBP23.87■■□□□ 1.41
AC004449.1-201ENST00000564240 ANKARQ7Z5J8 1434 aa23.86■■□□□ 1.41
AC004449.1-201ENST00000564240 CCDC125Q86Z20 511 aa23.84■■□□□ 1.41
AC004449.1-201ENST00000564240 ADGRB1O14514 1584 aa23.83■■□□□ 1.41
AC004449.1-201ENST00000564240 A0A0G2JS52 829 aa23.83■■□□□ 1.41
AC004449.1-201ENST00000564240 MYT1Q01538 1121 aa23.83■■□□□ 1.41
AC004449.1-201ENST00000564240 SLIT2O94813 1529 aa23.83■■□□□ 1.41
AC004449.1-201ENST00000564240 FAM83GA6ND36 823 aa23.82■■□□□ 1.4
AC004449.1-201ENST00000564240 VPS72Q15906 364 aa23.81■■□□□ 1.4
AC004449.1-201ENST00000564240 SEPT12Q8IYM1 358 aa23.81■■□□□ 1.4
AC004449.1-201ENST00000564240 PRR36Q9H6K5 1346 aa23.81■■□□□ 1.4
AC004449.1-201ENST00000564240 RALGAPBQ86X10 1494 aa23.81■■□□□ 1.4
AC004449.1-201ENST00000564240 ZRANB1Q9UGI0 708 aa23.8■■□□□ 1.4
AC004449.1-201ENST00000564240 USP32Q8NFA0 1604 aa23.8■■□□□ 1.4
AC004449.1-201ENST00000564240 NUDT16Q96DE0 195 aaKnown RBP23.79■■□□□ 1.4
AC004449.1-201ENST00000564240 SF3B2Q13435 895 aaKnown RBP23.78■■□□□ 1.4
AC004449.1-201ENST00000564240 CDK19Q9BWU1 502 aa23.77■■□□□ 1.4
AC004449.1-201ENST00000564240 BTG4Q9NY30 223 aa23.77■■□□□ 1.4
AC004449.1-201ENST00000564240 ADGRB2O60241 1585 aa23.76■■□□□ 1.39
AC004449.1-201ENST00000564240 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.76■■□□□ 1.39
AC004449.1-201ENST00000564240 TULP4Q9NRJ4 1543 aa23.75■■□□□ 1.39
AC004449.1-201ENST00000564240 KRT27Q7Z3Y8 459 aa23.73■■□□□ 1.39
AC004449.1-201ENST00000564240 GLI3P10071 1580 aa23.73■■□□□ 1.39
AC004449.1-201ENST00000564240 PRDM11Q9NQV5 511 aa23.72■■□□□ 1.39
AC004449.1-201ENST00000564240 FAM98CQ17RN3 349 aaKnown RBP23.71■■□□□ 1.39
AC004449.1-201ENST00000564240 NBPF1Q3BBV0 1214 aa23.71■■□□□ 1.39
AC004449.1-201ENST00000564240 NUTM2GQ5VZR2 741 aa23.7■■□□□ 1.38
AC004449.1-201ENST00000564240 ONECUT3O60422 494 aaPredicted RBP23.69■■□□□ 1.38
AC004449.1-201ENST00000564240 PLCH1Q4KWH8 1693 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms