RNA–Protein interactions for RNA: ENST00000564240.1

AC004449.1-201, humanhuman

BASIC

Gene AC004449.1, Length 433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004449.1-201ENST00000564240 NISCHQ9Y2I1 1504 aa40.61■■■■■ 4.09
AC004449.1-201ENST00000564240 ABCC9O60706 1549 aa36.47■■■■□ 3.43
AC004449.1-201ENST00000564240 CCDC180Q9P1Z9 1646 aa36.32■■■■□ 3.4
AC004449.1-201ENST00000564240 DCAF8L2P0C7V8 631 aa34.66■■■■□ 3.14
AC004449.1-201ENST00000564240 RB1CC1Q8TDY2 1594 aa34.66■■■■□ 3.14
AC004449.1-201ENST00000564240 NACADO15069 1562 aa34.4■■■■□ 3.1
AC004449.1-201ENST00000564240 DNAJC5BQ9UF47 199 aa34.16■■■■□ 3.06
AC004449.1-201ENST00000564240 PABPN1Q86U42 306 aaKnown RBP eCLIP34.08■■■■□ 3.05
AC004449.1-201ENST00000564240 MYO15BQ96JP2 1530 aa33.85■■■■□ 3.01
AC004449.1-201ENST00000564240 UNC13AQ9UPW8 1703 aa33.76■■■■□ 3
AC004449.1-201ENST00000564240 ZCCHC6Q5VYS8 1495 aaKnown RBP33.6■■■□□ 2.97
AC004449.1-201ENST00000564240 BICRAQ9NZM4 1560 aa33.55■■■□□ 2.96
AC004449.1-201ENST00000564240 DCAF1Q9Y4B6 1507 aa33.45■■■□□ 2.95
AC004449.1-201ENST00000564240 SCRIBQ14160 1630 aa33.23■■■□□ 2.91
AC004449.1-201ENST00000564240 SHROOM4Q9ULL8 1493 aa33.08■■■□□ 2.89
AC004449.1-201ENST00000564240 CC2D2AQ9P2K1 1620 aa32.86■■■□□ 2.85
AC004449.1-201ENST00000564240 CECR2Q9BXF3 1484 aa32.82■■■□□ 2.84
AC004449.1-201ENST00000564240 EIF4G1Q04637 1599 aaKnown RBP32.78■■■□□ 2.84
AC004449.1-201ENST00000564240 NCAPD3P42695 1498 aa31.78■■■□□ 2.68
AC004449.1-201ENST00000564240 ATAD2BQ9ULI0 1458 aa31.7■■■□□ 2.66
AC004449.1-201ENST00000564240 SMARCA4P51532 1647 aa31.64■■■□□ 2.65
AC004449.1-201ENST00000564240 SMARCA2P51531 1590 aa31.61■■■□□ 2.65
AC004449.1-201ENST00000564240 ERCC6Q03468 1493 aa31.54■■■□□ 2.64
AC004449.1-201ENST00000564240 BAZ1AQ9NRL2 1556 aaPredicted RBP31.52■■■□□ 2.64
AC004449.1-201ENST00000564240 HMGXB3Q12766 1538 aa31.48■■■□□ 2.63
AC004449.1-201ENST00000564240 BAZ1BQ9UIG0 1483 aaKnown RBP31.45■■■□□ 2.62
AC004449.1-201ENST00000564240 DNAJC5Q9H3Z4 198 aa31.37■■■□□ 2.61
AC004449.1-201ENST00000564240 CUX2O14529 1486 aa31.33■■■□□ 2.61
AC004449.1-201ENST00000564240 MROH2BQ7Z745 1585 aa31.3■■■□□ 2.6
AC004449.1-201ENST00000564240 NESP48681 1621 aa31.3■■■□□ 2.6
AC004449.1-201ENST00000564240 PEG3Q9GZU2 1588 aa31.25■■■□□ 2.59
AC004449.1-201ENST00000564240 LAMC3Q9Y6N6 1575 aa31.03■■■□□ 2.56
AC004449.1-201ENST00000564240 PDS5BQ9NTI5 1447 aa30.97■■■□□ 2.55
AC004449.1-201ENST00000564240 WIZO95785 1651 aa30.93■■■□□ 2.54
AC004449.1-201ENST00000564240 CADPSQ9ULU8 1353 aa30.89■■■□□ 2.54
AC004449.1-201ENST00000564240 THOC2Q8NI27 1593 aaKnown RBP30.84■■■□□ 2.53
AC004449.1-201ENST00000564240 KIF21AQ7Z4S6 1674 aa30.83■■■□□ 2.53
AC004449.1-201ENST00000564240 RSF1Q96T23 1441 aaPredicted RBP30.7■■■□□ 2.5
AC004449.1-201ENST00000564240 MRC2Q9UBG0 1479 aa30.63■■■□□ 2.49
AC004449.1-201ENST00000564240 CEP164Q9UPV0 1460 aa30.54■■■□□ 2.48
AC004449.1-201ENST00000564240 TOP2AP11388 1531 aaKnown RBP30.52■■■□□ 2.48
AC004449.1-201ENST00000564240 FANCD2Q9BXW9 1451 aa30.51■■■□□ 2.48
AC004449.1-201ENST00000564240 WDR62O43379 1518 aa30.47■■■□□ 2.47
AC004449.1-201ENST00000564240 CFTRP13569 1480 aa30.46■■■□□ 2.47
AC004449.1-201ENST00000564240 CCDC88BA6NC98 1476 aa30.25■■■□□ 2.43
AC004449.1-201ENST00000564240 URB2Q14146 1524 aaKnown RBP30.21■■■□□ 2.43
AC004449.1-201ENST00000564240 TRIM41Q8WV44 630 aa30.18■■■□□ 2.42
AC004449.1-201ENST00000564240 OSCARQ8IYS5 282 aa30.11■■■□□ 2.41
AC004449.1-201ENST00000564240 PRDM2Q13029 1718 aa30.08■■■□□ 2.41
AC004449.1-201ENST00000564240 IFT140Q96RY7 1462 aa29.93■■■□□ 2.38
AC004449.1-201ENST00000564240 TOPBP1Q92547 1522 aa29.91■■■□□ 2.38
AC004449.1-201ENST00000564240 ABCC8Q09428 1581 aa29.89■■■□□ 2.38
AC004449.1-201ENST00000564240 ZNF608Q9ULD9 1512 aaPredicted RBP29.86■■■□□ 2.37
AC004449.1-201ENST00000564240 DNMBPQ6XZF7 1577 aa29.78■■■□□ 2.36
AC004449.1-201ENST00000564240 SUPT5HO00267 1087 aaKnown RBP29.67■■■□□ 2.34
AC004449.1-201ENST00000564240 AQRO60306 1485 aaKnown RBP eCLIP29.67■■■□□ 2.34
AC004449.1-201ENST00000564240 FBLN2P98095 1184 aa29.66■■■□□ 2.34
AC004449.1-201ENST00000564240 EIF4G3O43432 1585 aaKnown RBP29.63■■■□□ 2.33
AC004449.1-201ENST00000564240 POLA1P09884 1462 aaPredicted RBP29.6■■■□□ 2.33
AC004449.1-201ENST00000564240 SOGA1O94964 1423 aa29.58■■■□□ 2.33
AC004449.1-201ENST00000564240 TARBP1Q13395 1621 aaKnown RBP29.56■■■□□ 2.32
AC004449.1-201ENST00000564240 RAD54L2Q9Y4B4 1467 aa29.56■■■□□ 2.32
AC004449.1-201ENST00000564240 TDRD9Q8NDG6 1382 aaKnown RBP29.53■■■□□ 2.32
AC004449.1-201ENST00000564240 RIMBP3CA6NJZ7 1639 aa29.51■■■□□ 2.31
AC004449.1-201ENST00000564240 RIMBP3BA6NNM3 1639 aa29.51■■■□□ 2.31
AC004449.1-201ENST00000564240 RIMBP3Q9UFD9 1639 aa29.51■■■□□ 2.31
AC004449.1-201ENST00000564240 FGD5Q6ZNL6 1462 aa29.45■■■□□ 2.31
AC004449.1-201ENST00000564240 CYB5RLQ6IPT4 315 aa29.43■■■□□ 2.3
AC004449.1-201ENST00000564240 ARHGEF11O15085 1522 aa29.43■■■□□ 2.3
AC004449.1-201ENST00000564240 CHD1O14646 1710 aa29.42■■■□□ 2.3
AC004449.1-201ENST00000564240 CUX1P39880 1505 aa29.4■■■□□ 2.3
AC004449.1-201ENST00000564240 CHMP7Q8WUX9 453 aaPredicted RBP29.39■■■□□ 2.3
AC004449.1-201ENST00000564240 SNAPC4Q5SXM2 1469 aa29.31■■■□□ 2.28
AC004449.1-201ENST00000564240 GRIN2BQ13224 1484 aa29.26■■■□□ 2.27
AC004449.1-201ENST00000564240 WDR97A6NE52 1622 aa29.25■■■□□ 2.27
AC004449.1-201ENST00000564240 MAGI1Q96QZ7 1491 aaPredicted RBP29.21■■■□□ 2.27
AC004449.1-201ENST00000564240 TRHP20396 242 aaPredicted RBP29.18■■■□□ 2.26
AC004449.1-201ENST00000564240 GAPVD1Q14C86 1478 aa29.17■■■□□ 2.26
AC004449.1-201ENST00000564240 ARAP1Q96P48 1450 aa29.14■■■□□ 2.26
AC004449.1-201ENST00000564240 SYNJ1O43426 1573 aa29.13■■■□□ 2.25
AC004449.1-201ENST00000564240 SYNJ2O15056 1496 aa29.12■■■□□ 2.25
AC004449.1-201ENST00000564240 ABCA10Q8WWZ4 1543 aa29.08■■■□□ 2.25
AC004449.1-201ENST00000564240 WRNQ14191 1432 aaPredicted RBP eCLIP29.07■■■□□ 2.24
AC004449.1-201ENST00000564240 PBRM1Q86U86 1689 aa29.05■■■□□ 2.24
AC004449.1-201ENST00000564240 CLASP1Q7Z460 1538 aa29.04■■■□□ 2.24
AC004449.1-201ENST00000564240 ABCA5Q8WWZ7 1642 aa28.96■■■□□ 2.23
AC004449.1-201ENST00000564240 TOP2BQ02880 1626 aa28.92■■■□□ 2.22
AC004449.1-201ENST00000564240 BIVM-ERCC5R4GMW8 1640 aa28.89■■■□□ 2.22
AC004449.1-201ENST00000564240 GRIN2AQ12879 1464 aa28.85■■■□□ 2.21
AC004449.1-201ENST00000564240 FHAD1B1AJZ9 1412 aa28.8■■■□□ 2.2
AC004449.1-201ENST00000564240 ADAMTS12P58397 1594 aa28.77■■■□□ 2.2
AC004449.1-201ENST00000564240 ERICH3Q5RHP9 1530 aa28.72■■■□□ 2.19
AC004449.1-201ENST00000564240 NUP160Q12769 1436 aa28.7■■■□□ 2.19
AC004449.1-201ENST00000564240 CEP170Q5SW79 1584 aa28.7■■■□□ 2.18
AC004449.1-201ENST00000564240 ERCC6L2Q5T890 1561 aa28.65■■■□□ 2.18
AC004449.1-201ENST00000564240 JPH4Q96JJ6 628 aa28.61■■■□□ 2.17
AC004449.1-201ENST00000564240 PRG4Q92954 1404 aaPredicted RBP28.55■■■□□ 2.16
AC004449.1-201ENST00000564240 SHROOM2Q13796 1616 aa28.51■■■□□ 2.15
AC004449.1-201ENST00000564240 KIF27Q86VH2 1401 aa28.49■■■□□ 2.15
AC004449.1-201ENST00000564240 IGF1RP08069 1367 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms