RNA–Protein interactions for RNA: ENST00000564139.5

E4F1-204, Transcript of E4F transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene E4F1, Length 2,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-204ENST00000564139 TCP11L2Q8N4U5 519 aa25.91■■□□□ 1.74
E4F1-204ENST00000564139 NEURL4Q96JN8 1562 aa25.9■■□□□ 1.74
E4F1-204ENST00000564139 ABCA6Q8N139 1617 aa25.9■■□□□ 1.74
E4F1-204ENST00000564139 TET3O43151 1660 aa25.9■■□□□ 1.74
E4F1-204ENST00000564139 MAP3K4Q9Y6R4 1608 aa25.89■■□□□ 1.74
E4F1-204ENST00000564139 BCL2L13Q9BXK5 485 aa25.89■■□□□ 1.74
E4F1-204ENST00000564139 ARXQ96QS3 562 aa25.89■■□□□ 1.73
E4F1-204ENST00000564139 RTEL1-TNFRSF6BF6WH68 1400 aa25.89■■□□□ 1.73
E4F1-204ENST00000564139 MYOM2P54296 1465 aa25.89■■□□□ 1.73
E4F1-204ENST00000564139 SPRYD3Q8NCJ5 442 aa25.88■■□□□ 1.73
E4F1-204ENST00000564139 CHMP5Q9NZZ3 219 aa25.88■■□□□ 1.73
E4F1-204ENST00000564139 DEPDC5O75140 1603 aa25.88■■□□□ 1.73
E4F1-204ENST00000564139 MORC1Q86VD1 984 aa25.87■■□□□ 1.73
E4F1-204ENST00000564139 KANK1Q14678 1352 aa25.87■■□□□ 1.73
E4F1-204ENST00000564139 SBNO2Q9Y2G9 1366 aa25.86■■□□□ 1.73
E4F1-204ENST00000564139 SPAG9O60271 1321 aaKnown RBP25.86■■□□□ 1.73
E4F1-204ENST00000564139 CCDC27Q2M243 656 aa25.86■■□□□ 1.73
E4F1-204ENST00000564139 C22orf23Q9BZE7 217 aa25.86■■□□□ 1.73
E4F1-204ENST00000564139 GZF1Q9H116 711 aaPredicted RBP25.86■■□□□ 1.73
E4F1-204ENST00000564139 NSD3Q9BZ95 1437 aa25.85■■□□□ 1.73
E4F1-204ENST00000564139 MVPQ14764 893 aaKnown RBP25.85■■□□□ 1.73
E4F1-204ENST00000564139 MYO3AQ8NEV4 1616 aa25.85■■□□□ 1.73
E4F1-204ENST00000564139 PANK2Q9BZ23 570 aa25.85■■□□□ 1.73
E4F1-204ENST00000564139 TRAK2O60296 914 aa25.83■■□□□ 1.73
E4F1-204ENST00000564139 ADGRF5Q8IZF2 1346 aa25.83■■□□□ 1.73
E4F1-204ENST00000564139 CLCN1P35523 988 aa25.83■■□□□ 1.73
E4F1-204ENST00000564139 ZFYVE16Q7Z3T8 1539 aa25.83■■□□□ 1.73
E4F1-204ENST00000564139 MYH16Q9H6N6 1097 aa25.81■■□□□ 1.72
E4F1-204ENST00000564139 TNNT2P45379 298 aaPredicted RBP25.81■■□□□ 1.72
E4F1-204ENST00000564139 PNNQ9H307 717 aaKnown RBP25.81■■□□□ 1.72
E4F1-204ENST00000564139 MFAP1P55081 439 aaKnown RBP25.8■■□□□ 1.72
E4F1-204ENST00000564139 VWDEQ8N2E2 1590 aa25.8■■□□□ 1.72
E4F1-204ENST00000564139 MRE11P49959 708 aa25.8■■□□□ 1.72
E4F1-204ENST00000564139 ZKSCAN2Q63HK3 967 aa25.79■■□□□ 1.72
E4F1-204ENST00000564139 ZNF518AQ6AHZ1 1483 aa25.78■■□□□ 1.72
E4F1-204ENST00000564139 NCBP3Q53F19 620 aaKnown RBP25.78■■□□□ 1.72
E4F1-204ENST00000564139 FTSJ3Q8IY81 847 aaKnown RBP25.77■■□□□ 1.72
E4F1-204ENST00000564139 DZIP1LQ8IYY4 767 aaKnown RBP25.77■■□□□ 1.72
E4F1-204ENST00000564139 NAP1L5Q96NT1 182 aaPredicted RBP25.77■■□□□ 1.72
E4F1-204ENST00000564139 UGGT1Q9NYU2 1555 aa25.76■■□□□ 1.71
E4F1-204ENST00000564139 DDX11L8A8MPP1 907 aa25.76■■□□□ 1.71
E4F1-204ENST00000564139 HSCBQ8IWL3 235 aa25.75■■□□□ 1.71
E4F1-204ENST00000564139 AFAP1Q8N556 730 aa25.75■■□□□ 1.71
E4F1-204ENST00000564139 CFAP53Q96M91 514 aa25.75■■□□□ 1.71
E4F1-204ENST00000564139 HDAC1Q13547 482 aaPredicted RBP25.75■■□□□ 1.71
E4F1-204ENST00000564139 ZNF692Q9BU19 519 aaPredicted RBP25.75■■□□□ 1.71
E4F1-204ENST00000564139 IFT172Q9UG01 1749 aa25.75■■□□□ 1.71
E4F1-204ENST00000564139 NRXN1Q9ULB1 1477 aa25.75■■□□□ 1.71
E4F1-204ENST00000564139 MTHFSP49914 203 aa25.74■■□□□ 1.71
E4F1-204ENST00000564139 USP32Q8NFA0 1604 aa25.73■■□□□ 1.71
E4F1-204ENST00000564139 CT47B1P0C2W7 299 aaPredicted RBP25.73■■□□□ 1.71
E4F1-204ENST00000564139 NCOA3Q9Y6Q9 1424 aa25.72■■□□□ 1.71
E4F1-204ENST00000564139 SLC12A5Q9H2X9 1139 aa25.72■■□□□ 1.71
E4F1-204ENST00000564139 ISY1Q9ULR0 285 aaKnown RBP25.72■■□□□ 1.71
E4F1-204ENST00000564139 GRPEL1Q9HAV7 217 aa25.72■■□□□ 1.71
E4F1-204ENST00000564139 KIF1BO60333 1816 aa25.71■■□□□ 1.71
E4F1-204ENST00000564139 ADGRL1O94910 1474 aa25.7■■□□□ 1.7
E4F1-204ENST00000564139 ZCCHC11Q5TAX3 1644 aaKnown RBP25.69■■□□□ 1.7
E4F1-204ENST00000564139 ADGRB2O60241 1585 aa25.69■■□□□ 1.7
E4F1-204ENST00000564139 SETBP1Q9Y6X0 1596 aa25.69■■□□□ 1.7
E4F1-204ENST00000564139 DDIT3P35638 169 aa25.69■■□□□ 1.7
E4F1-204ENST00000564139 ERCC6L2Q5T890 1561 aa25.68■■□□□ 1.7
E4F1-204ENST00000564139 ZC3H13Q5T200 1668 aaKnown RBP25.68■■□□□ 1.7
E4F1-204ENST00000564139 SMC4Q9NTJ3 1288 aa25.68■■□□□ 1.7
E4F1-204ENST00000564139 DDX19BQ9UMR2 479 aa25.68■■□□□ 1.7
E4F1-204ENST00000564139 MROH2AA6NES4 1674 aa25.67■■□□□ 1.7
E4F1-204ENST00000564139 TRIM27P14373 513 aa25.67■■□□□ 1.7
E4F1-204ENST00000564139 SMC5Q8IY18 1101 aa25.67■■□□□ 1.7
E4F1-204ENST00000564139 KIF3BO15066 747 aa25.66■■□□□ 1.7
E4F1-204ENST00000564139 CHD1O14646 1710 aa25.66■■□□□ 1.7
E4F1-204ENST00000564139 ATP7AQ04656 1500 aa25.66■■□□□ 1.7
E4F1-204ENST00000564139 ARAP3Q8WWN8 1544 aa25.66■■□□□ 1.7
E4F1-204ENST00000564139 U2AF1L5P0DN76 240 aaPredicted RBP25.65■■□□□ 1.7
E4F1-204ENST00000564139 U2AF1Q01081 240 aaKnown RBP eCLIP25.65■■□□□ 1.77e-10■□□□□ 10.6
E4F1-204ENST00000564139 SNX21Q969T3 373 aa25.65■■□□□ 1.7
E4F1-204ENST00000564139 ITPRIPQ8IWB1 547 aa25.65■■□□□ 1.7
E4F1-204ENST00000564139 TSR2Q969E8 191 aaKnown RBP25.65■■□□□ 1.7
E4F1-204ENST00000564139 QRICH2Q9H0J4 1663 aa25.65■■□□□ 1.7
E4F1-204ENST00000564139 INO80Q9ULG1 1556 aaPredicted RBP25.65■■□□□ 1.7
E4F1-204ENST00000564139 RBM25P49756 843 aaKnown RBP25.64■■□□□ 1.7
E4F1-204ENST00000564139 MROH1Q8NDA8 1641 aa25.64■■□□□ 1.7
E4F1-204ENST00000564139 GLIPR1L2Q4G1C9 344 aa25.64■■□□□ 1.69
E4F1-204ENST00000564139 TRAK1Q9UPV9 953 aa25.63■■□□□ 1.69
E4F1-204ENST00000564139 NOS1P29475 1434 aa25.63■■□□□ 1.69
E4F1-204ENST00000564139 HSP90AA1P07900 732 aaKnown RBP25.63■■□□□ 1.69
E4F1-204ENST00000564139 EXOSC9Q06265 439 aaKnown RBP25.63■■□□□ 1.69
E4F1-204ENST00000564139 ESPNB1AK53 854 aa25.62■■□□□ 1.69
E4F1-204ENST00000564139 ATF7IPQ6VMQ6 1270 aa25.62■■□□□ 1.69
E4F1-204ENST00000564139 CIZ1Q9ULV3 898 aaPredicted RBP25.62■■□□□ 1.69
E4F1-204ENST00000564139 EFCAB6Q5THR3 1501 aa25.62■■□□□ 1.69
E4F1-204ENST00000564139 SSH1Q8WYL5 1049 aa25.61■■□□□ 1.69
E4F1-204ENST00000564139 TNPO1Q92973 898 aaKnown RBP25.6■■□□□ 1.69
E4F1-204ENST00000564139 NSD2O96028 1365 aa25.6■■□□□ 1.69
E4F1-204ENST00000564139 ERBB4Q15303 1308 aa25.58■■□□□ 1.69
E4F1-204ENST00000564139 ADGRB3O60242 1522 aa25.58■■□□□ 1.69
E4F1-204ENST00000564139 RRP9O43818 475 aaKnown RBP25.58■■□□□ 1.69
E4F1-204ENST00000564139 GBP4Q96PP9 640 aa25.58■■□□□ 1.69
E4F1-204ENST00000564139 ZBTB40Q9NUA8 1239 aa25.58■■□□□ 1.69
E4F1-204ENST00000564139 UHRF1BP1LA0JNW5 1464 aa25.57■■□□□ 1.68
E4F1-204ENST00000564139 NUCB1Q02818 461 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms