RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 ADAMTSL3P82987 1691 aa11.82□□□□□ -0.52
AC138869.3-201ENST00000563960 TPM2P07951 284 aa11.82□□□□□ -0.52
AC138869.3-201ENST00000563960 NBPF1Q3BBV0 1214 aa11.81□□□□□ -0.52
AC138869.3-201ENST00000563960 SPATA31D1Q6ZQQ2 1576 aa11.81□□□□□ -0.52
AC138869.3-201ENST00000563960 FSD2A1L4K1 749 aa11.81□□□□□ -0.52
AC138869.3-201ENST00000563960 C3P01024 1663 aa11.81□□□□□ -0.52
AC138869.3-201ENST00000563960 C8orf34Q49A92 452 aa11.8□□□□□ -0.52
AC138869.3-201ENST00000563960 RCAN3Q9UKA8 241 aa11.8□□□□□ -0.52
AC138869.3-201ENST00000563960 PTPRMP28827 1452 aa11.8□□□□□ -0.52
AC138869.3-201ENST00000563960 GOLGA6L3A6NEY3 463 aa11.8□□□□□ -0.52
AC138869.3-201ENST00000563960 ERBB4Q15303 1308 aa11.79□□□□□ -0.52
AC138869.3-201ENST00000563960 CFAP70Q5T0N1 1121 aa11.79□□□□□ -0.52
AC138869.3-201ENST00000563960 POLR1AO95602 1720 aaPredicted RBP11.79□□□□□ -0.52
AC138869.3-201ENST00000563960 ESPNB1AK53 854 aa11.78□□□□□ -0.52
AC138869.3-201ENST00000563960 PIK3C2BO00750 1634 aa11.78□□□□□ -0.52
AC138869.3-201ENST00000563960 FAM161AQ3B820 660 aa11.78□□□□□ -0.52
AC138869.3-201ENST00000563960 A2ML1A8K2U0 1454 aa11.77□□□□□ -0.52
AC138869.3-201ENST00000563960 KIF7Q2M1P5 1343 aa11.77□□□□□ -0.52
AC138869.3-201ENST00000563960 VGFO15240 615 aaPredicted RBP11.77□□□□□ -0.53
AC138869.3-201ENST00000563960 MROH2AA6NES4 1674 aa11.77□□□□□ -0.53
AC138869.3-201ENST00000563960 ADGRB3O60242 1522 aa11.77□□□□□ -0.53
AC138869.3-201ENST00000563960 LTKP29376 864 aa11.77□□□□□ -0.53
AC138869.3-201ENST00000563960 PNISRQ8TF01 805 aaKnown RBP11.77□□□□□ -0.53
AC138869.3-201ENST00000563960 TMEM132EQ6IEE7 984 aa11.76□□□□□ -0.53
AC138869.3-201ENST00000563960 CARD11Q9BXL7 1154 aa11.76□□□□□ -0.53
AC138869.3-201ENST00000563960 RPGRIP1LQ68CZ1 1315 aa11.76□□□□□ -0.53
AC138869.3-201ENST00000563960 PRAG1Q86YV5 1406 aa11.76□□□□□ -0.53
AC138869.3-201ENST00000563960 TXNDC2Q86VQ3 553 aa11.76□□□□□ -0.53
AC138869.3-201ENST00000563960 KIF1BO60333 1816 aa11.75□□□□□ -0.53
AC138869.3-201ENST00000563960 TMEM131LA2VDJ0 1609 aa11.75□□□□□ -0.53
AC138869.3-201ENST00000563960 THEMISQ8N1K5 641 aaPredicted RBP11.75□□□□□ -0.53
AC138869.3-201ENST00000563960 CNGB1Q14028 1251 aaPredicted RBP11.75□□□□□ -0.53
AC138869.3-201ENST00000563960 ROCK2O75116 1388 aaKnown RBP11.74□□□□□ -0.53
AC138869.3-201ENST00000563960 RIMS2Q9UQ26 1411 aa11.74□□□□□ -0.53
AC138869.3-201ENST00000563960 TMEM2Q9UHN6 1383 aa11.74□□□□□ -0.53
AC138869.3-201ENST00000563960 HSPA2P54652 639 aa11.74□□□□□ -0.53
AC138869.3-201ENST00000563960 UHRF1BP1Q6BDS2 1440 aa11.74□□□□□ -0.53
AC138869.3-201ENST00000563960 BBXQ8WY36 941 aaPredicted RBP11.74□□□□□ -0.53
AC138869.3-201ENST00000563960 NLRP1Q9C000 1473 aa11.73□□□□□ -0.53
AC138869.3-201ENST00000563960 KDM2BQ8NHM5 1336 aa11.73□□□□□ -0.53
AC138869.3-201ENST00000563960 MYO5BQ9ULV0 1848 aa11.73□□□□□ -0.53
AC138869.3-201ENST00000563960 KTN1Q86UP2 1357 aaKnown RBP11.73□□□□□ -0.53
AC138869.3-201ENST00000563960 PLIN1O60240 522 aa11.72□□□□□ -0.53
AC138869.3-201ENST00000563960 KIAA1211Q6ZU35 1233 aa11.72□□□□□ -0.53
AC138869.3-201ENST00000563960 CRBNQ96SW2 442 aa11.72□□□□□ -0.53
AC138869.3-201ENST00000563960 GTF2E1P29083 439 aaPredicted RBP11.72□□□□□ -0.53
AC138869.3-201ENST00000563960 SLKQ9H2G2 1235 aaPredicted RBP11.72□□□□□ -0.53
AC138869.3-201ENST00000563960 NEXMIFQ5QGS0 1516 aa11.72□□□□□ -0.53
AC138869.3-201ENST00000563960 STAC3Q96MF2 364 aa11.71□□□□□ -0.53
AC138869.3-201ENST00000563960 SLC26A8Q96RN1 970 aa11.71□□□□□ -0.53
AC138869.3-201ENST00000563960 STK26Q9P289 416 aa11.71□□□□□ -0.53
AC138869.3-201ENST00000563960 EID1Q9Y6B2 187 aa11.71□□□□□ -0.53
AC138869.3-201ENST00000563960 SMAP1Q8IYB5 467 aaPredicted RBP11.71□□□□□ -0.53
AC138869.3-201ENST00000563960 GZF1Q9H116 711 aaPredicted RBP11.71□□□□□ -0.53
AC138869.3-201ENST00000563960 C14orf93Q9H972 538 aaKnown RBP11.71□□□□□ -0.53
AC138869.3-201ENST00000563960 MRE11P49959 708 aa11.7□□□□□ -0.54
AC138869.3-201ENST00000563960 RIPK4P57078 832 aa11.7□□□□□ -0.54
AC138869.3-201ENST00000563960 MYH16Q9H6N6 1097 aa11.7□□□□□ -0.54
AC138869.3-201ENST00000563960 USP47Q96K76 1375 aa11.7□□□□□ -0.54
AC138869.3-201ENST00000563960 HDGFP51858 240 aaKnown RBP11.7□□□□□ -0.54
AC138869.3-201ENST00000563960 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.7□□□□□ -0.54
AC138869.3-201ENST00000563960 ANTXR1Q9H6X2 564 aa11.7□□□□□ -0.54
AC138869.3-201ENST00000563960 ZHX1Q9UKY1 873 aaPredicted RBP11.7□□□□□ -0.54
AC138869.3-201ENST00000563960 POLR3GLQ9BT43 218 aa11.69□□□□□ -0.54
AC138869.3-201ENST00000563960 LRPPRCP42704 1394 aaKnown RBP11.69□□□□□ -0.54
AC138869.3-201ENST00000563960 ZFYVE9O95405 1425 aa11.69□□□□□ -0.54
AC138869.3-201ENST00000563960 USP19O94966 1318 aa11.69□□□□□ -0.54
AC138869.3-201ENST00000563960 ST20-MTHFSA0A0A6YYL1 179 aa11.69□□□□□ -0.54
AC138869.3-201ENST00000563960 TMC1Q8TDI8 760 aa11.69□□□□□ -0.54
AC138869.3-201ENST00000563960 NAP1L2Q9ULW6 460 aaPredicted RBP11.69□□□□□ -0.54
AC138869.3-201ENST00000563960 TRAK1Q9UPV9 953 aa11.69□□□□□ -0.54
AC138869.3-201ENST00000563960 PIK3C2GO75747 1445 aa11.68□□□□□ -0.54
AC138869.3-201ENST00000563960 NCKAP5LQ9HCH0 1330 aa11.68□□□□□ -0.54
AC138869.3-201ENST00000563960 UBR1Q8IWV7 1749 aa11.68□□□□□ -0.54
AC138869.3-201ENST00000563960 MYO3AQ8NEV4 1616 aa11.68□□□□□ -0.54
AC138869.3-201ENST00000563960 NEURL4Q96JN8 1562 aa11.68□□□□□ -0.54
AC138869.3-201ENST00000563960 MYOM2P54296 1465 aa11.68□□□□□ -0.54
AC138869.3-201ENST00000563960 ANKLE2Q86XL3 938 aa11.68□□□□□ -0.54
AC138869.3-201ENST00000563960 CEP170BQ9Y4F5 1589 aaPredicted RBP11.68□□□□□ -0.54
AC138869.3-201ENST00000563960 CENPQQ7L2Z9 268 aaPredicted RBP11.67□□□□□ -0.54
AC138869.3-201ENST00000563960 RALGAPBQ86X10 1494 aa11.67□□□□□ -0.54
AC138869.3-201ENST00000563960 SETD1BQ9UPS6 1966 aaKnown RBP11.67□□□□□ -0.54
AC138869.3-201ENST00000563960 MAP7D2Q96T17 732 aa11.67□□□□□ -0.54
AC138869.3-201ENST00000563960 GRPEL1Q9HAV7 217 aa11.67□□□□□ -0.54
AC138869.3-201ENST00000563960 PPLO60437 1756 aa11.67□□□□□ -0.54
AC138869.3-201ENST00000563960 NRXN1Q9ULB1 1477 aa11.67□□□□□ -0.54
AC138869.3-201ENST00000563960 SAFB2Q14151 953 aaKnown RBP eCLIP11.66□□□□□ -0.54
AC138869.3-201ENST00000563960 TRIM44Q96DX7 344 aaPredicted RBP11.65□□□□□ -0.54
AC138869.3-201ENST00000563960 CHMP4BQ9H444 224 aaKnown RBP11.65□□□□□ -0.54
AC138869.3-201ENST00000563960 METP08581 1390 aa11.65□□□□□ -0.54
AC138869.3-201ENST00000563960 BECN1Q14457 450 aa11.65□□□□□ -0.54
AC138869.3-201ENST00000563960 FAM13BQ9NYF5 915 aa11.65□□□□□ -0.54
AC138869.3-201ENST00000563960 IFT172Q9UG01 1749 aa11.64□□□□□ -0.55
AC138869.3-201ENST00000563960 TAF7LQ5H9L4 462 aa11.64□□□□□ -0.55
AC138869.3-201ENST00000563960 C20orf194Q5TEA3 1177 aa11.64□□□□□ -0.55
AC138869.3-201ENST00000563960 CDCA7LQ96GN5 454 aa11.64□□□□□ -0.55
AC138869.3-201ENST00000563960 TRPM1Q7Z4N2 1603 aa11.64□□□□□ -0.55
AC138869.3-201ENST00000563960 CANXP27824 592 aaKnown RBP11.64□□□□□ -0.55
AC138869.3-201ENST00000563960 MCM4P33991 863 aa11.64□□□□□ -0.55
AC138869.3-201ENST00000563960 PDE3BQ13370 1112 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms