RNA–Protein interactions for RNA: ENST00000563824.5

TCF4-220, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-220ENST00000563824 ATP1B4Q9UN42 357 aaPredicted RBP9.55□□□□□ -0.88
TCF4-220ENST00000563824 ABCA9Q8IUA7 1624 aa9.55□□□□□ -0.88
TCF4-220ENST00000563824 SETD1BQ9UPS6 1966 aaKnown RBP9.55□□□□□ -0.88
TCF4-220ENST00000563824 PTPRTO14522 1441 aa9.55□□□□□ -0.88
TCF4-220ENST00000563824 RIMBP2O15034 1052 aa9.54□□□□□ -0.88
TCF4-220ENST00000563824 RAPGEF3O95398 923 aa9.54□□□□□ -0.88
TCF4-220ENST00000563824 FOSBP53539 338 aa9.54□□□□□ -0.88
TCF4-220ENST00000563824 DOK7Q18PE1 504 aa9.54□□□□□ -0.88
TCF4-220ENST00000563824 PADI6Q6TGC4 694 aa9.54□□□□□ -0.88
TCF4-220ENST00000563824 ZDHHC16Q969W1 377 aa9.54□□□□□ -0.88
TCF4-220ENST00000563824 ARHGEF40Q8TER5 1519 aa9.54□□□□□ -0.88
TCF4-220ENST00000563824 PREX1Q8TCU6 1659 aa9.54□□□□□ -0.88
TCF4-220ENST00000563824 ABCA8O94911 1581 aa9.54□□□□□ -0.88
TCF4-220ENST00000563824 NUDT7P0C024 238 aa9.53□□□□□ -0.88
TCF4-220ENST00000563824 FLIIQ13045 1269 aa9.53□□□□□ -0.88
TCF4-220ENST00000563824 ZNF710Q8N1W2 664 aa9.53□□□□□ -0.88
TCF4-220ENST00000563824 MYT1LQ9UL68 1186 aa9.53□□□□□ -0.88
TCF4-220ENST00000563824 TTC37Q6PGP7 1564 aa9.53□□□□□ -0.88
TCF4-220ENST00000563824 OATP04181 439 aa9.52□□□□□ -0.89
TCF4-220ENST00000563824 FAM161AQ3B820 660 aa9.52□□□□□ -0.89
TCF4-220ENST00000563824 C6orf132Q5T0Z8 1188 aa9.52□□□□□ -0.89
TCF4-220ENST00000563824 AKNAQ7Z591 1439 aa9.52□□□□□ -0.89
TCF4-220ENST00000563824 SSTR3P32745 418 aaPredicted RBP9.51□□□□□ -0.89
TCF4-220ENST00000563824 SH3D19Q5HYK7 790 aa9.51□□□□□ -0.89
TCF4-220ENST00000563824 METTL3Q86U44 580 aaKnown RBP9.51□□□□□ -0.89
TCF4-220ENST00000563824 ZNF687Q8N1G0 1237 aa9.51□□□□□ -0.89
TCF4-220ENST00000563824 MAGI2Q86UL8 1455 aa9.51□□□□□ -0.89
TCF4-220ENST00000563824 FRMPD1Q5SYB0 1578 aa9.5□□□□□ -0.89
TCF4-220ENST00000563824 STRCQ7RTU9 1775 aa9.5□□□□□ -0.89
TCF4-220ENST00000563824 VARS2Q5ST30 1063 aaKnown RBP9.5□□□□□ -0.89
TCF4-220ENST00000563824 PHOX2BQ99453 314 aa9.5□□□□□ -0.89
TCF4-220ENST00000563824 FHOD3Q2V2M9 1422 aa9.49□□□□□ -0.89
TCF4-220ENST00000563824 DENND4BO75064 1496 aaPredicted RBP9.49□□□□□ -0.89
TCF4-220ENST00000563824 RAPGEF2Q9Y4G8 1499 aa9.49□□□□□ -0.89
TCF4-220ENST00000563824 NLRP7Q8WX94 980 aa9.49□□□□□ -0.89
TCF4-220ENST00000563824 BEGAINQ9BUH8 593 aa9.49□□□□□ -0.89
TCF4-220ENST00000563824 TMUB1Q9BVT8 246 aa9.49□□□□□ -0.89
TCF4-220ENST00000563824 RBM27Q9P2N5 1060 aaKnown RBP9.49□□□□□ -0.89
TCF4-220ENST00000563824 FER1L4A9Z1Z3 1794 aa9.49□□□□□ -0.89
TCF4-220ENST00000563824 EFCAB5A4FU69 1503 aa9.48□□□□□ -0.89
TCF4-220ENST00000563824 ARSIQ5FYB1 569 aa9.48□□□□□ -0.89
TCF4-220ENST00000563824 KHSRPQ92945 711 aaKnown RBP eCLIP9.48□□□□□ -0.892e-6■■■□□ 17.4
TCF4-220ENST00000563824 ADGRG1Q9Y653 693 aa9.48□□□□□ -0.89
TCF4-220ENST00000563824 UHRF1BP1Q6BDS2 1440 aa9.48□□□□□ -0.89
TCF4-220ENST00000563824 CFAP74Q9C0B2 1584 aa9.47□□□□□ -0.89
TCF4-220ENST00000563824 PXYLP1Q8TE99 480 aa9.47□□□□□ -0.89
TCF4-220ENST00000563824 ADAM33Q9BZ11 813 aa9.47□□□□□ -0.89
TCF4-220ENST00000563824 FAM217BQ9NTX9 383 aaPredicted RBP9.47□□□□□ -0.89
TCF4-220ENST00000563824 RICTORQ6R327 1708 aa9.47□□□□□ -0.89
TCF4-220ENST00000563824 ZMYM4Q5VZL5 1548 aa9.46□□□□□ -0.89
TCF4-220ENST00000563824 LTBP4Q8N2S1 1624 aa9.46□□□□□ -0.89
TCF4-220ENST00000563824 GPR153Q6NV75 609 aa9.46□□□□□ -0.9
TCF4-220ENST00000563824 RBM46Q8TBY0 533 aaKnown RBP9.46□□□□□ -0.9
TCF4-220ENST00000563824 ZSWIM6Q9HCJ5 1215 aa9.46□□□□□ -0.9
TCF4-220ENST00000563824 ZFYVE16Q7Z3T8 1539 aa9.45□□□□□ -0.9
TCF4-220ENST00000563824 PRSS12P56730 875 aa9.44□□□□□ -0.9
TCF4-220ENST00000563824 SKIV2LQ15477 1246 aaKnown RBP9.44□□□□□ -0.9
TCF4-220ENST00000563824 PPP4R3BQ5MIZ7 849 aa9.44□□□□□ -0.9
TCF4-220ENST00000563824 CDCA7LQ96GN5 454 aa9.44□□□□□ -0.9
TCF4-220ENST00000563824 ATP10BO94823 1461 aa9.44□□□□□ -0.9
TCF4-220ENST00000563824 ARHGEF12Q9NZN5 1544 aa9.44□□□□□ -0.9
TCF4-220ENST00000563824 UBTFP17480 764 aaKnown RBP9.43□□□□□ -0.9
TCF4-220ENST00000563824 CTTNBP2Q8WZ74 1663 aa9.42□□□□□ -0.9
TCF4-220ENST00000563824 POLR3EQ9NVU0 708 aa9.42□□□□□ -0.9
TCF4-220ENST00000563824 UBAP1LF5GYI3 381 aa9.41□□□□□ -0.9
TCF4-220ENST00000563824 ONECUT3O60422 494 aaPredicted RBP9.41□□□□□ -0.9
TCF4-220ENST00000563824 TTC13Q8NBP0 860 aa9.41□□□□□ -0.9
TCF4-220ENST00000563824 ARID3AQ99856 593 aa9.41□□□□□ -0.9
TCF4-220ENST00000563824 LHX6Q9UPM6 363 aa9.41□□□□□ -0.9
TCF4-220ENST00000563824 PSDA5PKW4 1024 aaPredicted RBP9.4□□□□□ -0.9
TCF4-220ENST00000563824 CLK2P49760 499 aaKnown RBP9.4□□□□□ -0.9
TCF4-220ENST00000563824 DIXDC1Q155Q3 683 aa9.4□□□□□ -0.9
TCF4-220ENST00000563824 MED1Q15648 1581 aaPredicted RBP9.4□□□□□ -0.9
TCF4-220ENST00000563824 ATP10AO60312 1499 aa9.4□□□□□ -0.91
TCF4-220ENST00000563824 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.39□□□□□ -0.91
TCF4-220ENST00000563824 MCM6Q14566 821 aa9.39□□□□□ -0.91
TCF4-220ENST00000563824 MYSM1Q5VVJ2 828 aa9.39□□□□□ -0.91
TCF4-220ENST00000563824 C9orf84Q5VXU9 1444 aa9.39□□□□□ -0.91
TCF4-220ENST00000563824 PTPREP23469 700 aa9.38□□□□□ -0.91
TCF4-220ENST00000563824 MLECQ14165 292 aa9.38□□□□□ -0.91
TCF4-220ENST00000563824 CLUAP1Q96AJ1 413 aa9.38□□□□□ -0.91
TCF4-220ENST00000563824 NCOA1Q15788 1441 aa9.38□□□□□ -0.91
TCF4-220ENST00000563824 ARID3CA6NKF2 412 aa9.37□□□□□ -0.91
TCF4-220ENST00000563824 NBPF26B4DH59 902 aa9.37□□□□□ -0.91
TCF4-220ENST00000563824 PPP1R3GB7ZBB8 358 aa9.37□□□□□ -0.91
TCF4-220ENST00000563824 BCL2L12Q9HB09 334 aa9.37□□□□□ -0.91
TCF4-220ENST00000563824 SIGLEC1Q9BZZ2 1709 aa9.36□□□□□ -0.91
TCF4-220ENST00000563824 RCCD1A6NED2 376 aa9.36□□□□□ -0.91
TCF4-220ENST00000563824 APBB1O00213 710 aa9.36□□□□□ -0.91
TCF4-220ENST00000563824 COL9A1P20849 921 aa9.36□□□□□ -0.91
TCF4-220ENST00000563824 PROCA1Q8NCQ7 364 aaPredicted RBP9.36□□□□□ -0.91
TCF4-220ENST00000563824 TBC1D2Q9BYX2 928 aa9.36□□□□□ -0.91
TCF4-220ENST00000563824 TRAPPC8Q9Y2L5 1435 aa9.36□□□□□ -0.91
TCF4-220ENST00000563824 HECW1Q76N89 1606 aa9.35□□□□□ -0.91
TCF4-220ENST00000563824 PLEKHD1A6NEE1 506 aa9.35□□□□□ -0.91
TCF4-220ENST00000563824 CEBPAP49715 358 aaPredicted RBP9.35□□□□□ -0.91
TCF4-220ENST00000563824 SULF1Q8IWU6 871 aa9.35□□□□□ -0.91
TCF4-220ENST00000563824 A6NJR5 290 aa9.34□□□□□ -0.91
TCF4-220ENST00000563824 RAD21O60216 631 aa9.34□□□□□ -0.91
TCF4-220ENST00000563824 TOM1O60784 492 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms