RNA–Protein interactions for RNA: ENST00000562710.1

LINC00565-201, long intergenic non-protein coding RNA 565, humanhuman

BASIC

Gene LINC00565, Length 2,331 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00565-201ENST00000562710 CFAP65Q6ZU64 1925 aaKnown RBP28.12■■■□□ 2.09
LINC00565-201ENST00000562710 RUNDC1Q96C34 613 aa28.12■■■□□ 2.09
LINC00565-201ENST00000562710 VIRMAQ69YN4 1812 aaKnown RBP28.11■■■□□ 2.09
LINC00565-201ENST00000562710 NPATQ14207 1427 aa28.11■■■□□ 2.09
LINC00565-201ENST00000562710 CANXP27824 592 aaKnown RBP28.1■■■□□ 2.09
LINC00565-201ENST00000562710 CLUAP1Q96AJ1 413 aa28.1■■■□□ 2.09
LINC00565-201ENST00000562710 TNNT2P45379 298 aaPredicted RBP28.1■■■□□ 2.09
LINC00565-201ENST00000562710 NFKBIBQ15653 356 aa28.1■■■□□ 2.09
LINC00565-201ENST00000562710 PANK1Q8TE04 598 aa28.09■■■□□ 2.09
LINC00565-201ENST00000562710 COG6Q9Y2V7 657 aa28.09■■■□□ 2.09
LINC00565-201ENST00000562710 IQSEC2Q5JU85 1478 aa28.09■■■□□ 2.09
LINC00565-201ENST00000562710 USP32Q8NFA0 1604 aa28.08■■■□□ 2.09
LINC00565-201ENST00000562710 NEUROD2Q15784 382 aa28.07■■■□□ 2.08
LINC00565-201ENST00000562710 TCP11L2Q8N4U5 519 aa28.07■■■□□ 2.08
LINC00565-201ENST00000562710 PHF23Q9BUL5 403 aaPredicted RBP28.07■■■□□ 2.08
LINC00565-201ENST00000562710 RRP7AQ9Y3A4 280 aaKnown RBP28.06■■■□□ 2.08
LINC00565-201ENST00000562710 TMEM132EQ6IEE7 984 aa28.06■■■□□ 2.08
LINC00565-201ENST00000562710 RARSP54136 660 aaKnown RBP28.04■■■□□ 2.08
LINC00565-201ENST00000562710 RPGRIP1LQ68CZ1 1315 aa28.04■■■□□ 2.08
LINC00565-201ENST00000562710 MAPK8IP3Q9UPT6 1336 aa28.04■■■□□ 2.08
LINC00565-201ENST00000562710 WDR63Q8IWG1 891 aa28.03■■■□□ 2.08
LINC00565-201ENST00000562710 FRAT1Q92837 279 aaPredicted RBP28.03■■■□□ 2.08
LINC00565-201ENST00000562710 FRMPD1Q5SYB0 1578 aa28.03■■■□□ 2.08
LINC00565-201ENST00000562710 MTHFSP49914 203 aa28.02■■■□□ 2.08
LINC00565-201ENST00000562710 GGT6Q6P531 493 aa28.02■■■□□ 2.08
LINC00565-201ENST00000562710 AAMPQ13685 434 aa28■■■□□ 2.07
LINC00565-201ENST00000562710 CCDC27Q2M243 656 aa28■■■□□ 2.07
LINC00565-201ENST00000562710 CFAP53Q96M91 514 aa28■■■□□ 2.07
LINC00565-201ENST00000562710 POGZQ7Z3K3 1410 aa27.99■■■□□ 2.07
LINC00565-201ENST00000562710 HECW2Q9P2P5 1572 aa27.99■■■□□ 2.07
LINC00565-201ENST00000562710 MLH3Q9UHC1 1453 aa27.99■■■□□ 2.07
LINC00565-201ENST00000562710 GSE1Q14687 1217 aa27.98■■■□□ 2.07
LINC00565-201ENST00000562710 USP19O94966 1318 aa27.98■■■□□ 2.07
LINC00565-201ENST00000562710 PUS7Q96PZ0 661 aaKnown RBP27.97■■■□□ 2.07
LINC00565-201ENST00000562710 GLI2P10070 1586 aa27.97■■■□□ 2.07
LINC00565-201ENST00000562710 CFAP74Q9C0B2 1584 aa27.96■■■□□ 2.07
LINC00565-201ENST00000562710 PMFBP1Q8TBY8 1022 aa27.96■■■□□ 2.07
LINC00565-201ENST00000562710 ABCC3O15438 1527 aa27.95■■■□□ 2.07
LINC00565-201ENST00000562710 EVC2Q86UK5 1308 aa27.95■■■□□ 2.06
LINC00565-201ENST00000562710 ANKRD36BQ8N2N9 1353 aa27.94■■■□□ 2.06
LINC00565-201ENST00000562710 ARHGEF28Q8N1W1 1705 aaKnown RBP27.94■■■□□ 2.06
LINC00565-201ENST00000562710 NSD2O96028 1365 aa27.94■■■□□ 2.06
LINC00565-201ENST00000562710 RLBP1P12271 317 aa27.93■■■□□ 2.06
LINC00565-201ENST00000562710 NCBP3Q53F19 620 aaKnown RBP27.93■■■□□ 2.06
LINC00565-201ENST00000562710 IL27Q8NEV9 243 aa27.93■■■□□ 2.06
LINC00565-201ENST00000562710 TULP4Q9NRJ4 1543 aa27.93■■■□□ 2.06
LINC00565-201ENST00000562710 CD109Q6YHK3 1445 aa27.92■■■□□ 2.06
LINC00565-201ENST00000562710 SEC24BO95487 1268 aa27.91■■■□□ 2.06
LINC00565-201ENST00000562710 TNNQ9UQP3 1299 aa27.91■■■□□ 2.06
LINC00565-201ENST00000562710 PCDHB15Q9Y5E8 787 aa27.91■■■□□ 2.06
LINC00565-201ENST00000562710 CAMSAP1Q5T5Y3 1602 aa27.91■■■□□ 2.06
LINC00565-201ENST00000562710 SIGLEC1Q9BZZ2 1709 aa27.9■■■□□ 2.06
LINC00565-201ENST00000562710 BCL2L13Q9BXK5 485 aa27.9■■■□□ 2.06
LINC00565-201ENST00000562710 MYH16Q9H6N6 1097 aa27.9■■■□□ 2.06
LINC00565-201ENST00000562710 VGFO15240 615 aaPredicted RBP27.89■■■□□ 2.06
LINC00565-201ENST00000562710 PIK3C2BO00750 1634 aa27.89■■■□□ 2.05
LINC00565-201ENST00000562710 NPM1P06748 294 aaKnown RBP eCLIP27.89■■■□□ 2.05
LINC00565-201ENST00000562710 U2AF1L5P0DN76 240 aaPredicted RBP27.88■■■□□ 2.05
LINC00565-201ENST00000562710 U2AF1Q01081 240 aaKnown RBP eCLIP27.88■■■□□ 2.05
LINC00565-201ENST00000562710 NEXMIFQ5QGS0 1516 aa27.88■■■□□ 2.05
LINC00565-201ENST00000562710 ADGRB2O60241 1585 aa27.87■■■□□ 2.05
LINC00565-201ENST00000562710 FRAT2O75474 233 aaPredicted RBP27.87■■■□□ 2.05
LINC00565-201ENST00000562710 NUTM2DQ5VT03 806 aaPredicted RBP27.87■■■□□ 2.05
LINC00565-201ENST00000562710 ZMYM3Q14202 1370 aa27.86■■■□□ 2.05
LINC00565-201ENST00000562710 NLRP1Q9C000 1473 aa27.85■■■□□ 2.05
LINC00565-201ENST00000562710 CABP2Q9NPB3 220 aa27.85■■■□□ 2.05
LINC00565-201ENST00000562710 PDZRN3Q9UPQ7 1066 aa27.83■■■□□ 2.05
LINC00565-201ENST00000562710 RWDD1Q9H446 243 aaPredicted RBP27.83■■■□□ 2.04
LINC00565-201ENST00000562710 BECN1Q14457 450 aa27.81■■■□□ 2.04
LINC00565-201ENST00000562710 MVPQ14764 893 aaKnown RBP27.8■■■□□ 2.04
LINC00565-201ENST00000562710 CT47B1P0C2W7 299 aaPredicted RBP27.79■■■□□ 2.04
LINC00565-201ENST00000562710 ABCC11Q96J66 1382 aa27.79■■■□□ 2.04
LINC00565-201ENST00000562710 ZKSCAN2Q63HK3 967 aa27.79■■■□□ 2.04
LINC00565-201ENST00000562710 A0A1W2PP64 1363 aa27.78■■■□□ 2.04
LINC00565-201ENST00000562710 SAFB2Q14151 953 aaKnown RBP eCLIP27.78■■■□□ 2.04
LINC00565-201ENST00000562710 DZIP1LQ8IYY4 767 aaKnown RBP27.76■■■□□ 2.03
LINC00565-201ENST00000562710 UPF2Q9HAU5 1272 aaKnown RBP27.76■■■□□ 2.03
LINC00565-201ENST00000562710 PLEKHF1Q96S99 279 aa27.75■■■□□ 2.03
LINC00565-201ENST00000562710 FTSJ3Q8IY81 847 aaKnown RBP27.75■■■□□ 2.03
LINC00565-201ENST00000562710 TSR2Q969E8 191 aaKnown RBP27.75■■■□□ 2.03
LINC00565-201ENST00000562710 ZFYVE9O95405 1425 aa27.75■■■□□ 2.03
LINC00565-201ENST00000562710 IDI1Q13907 227 aa27.74■■■□□ 2.03
LINC00565-201ENST00000562710 ARHGAP31Q2M1Z3 1444 aa27.74■■■□□ 2.03
LINC00565-201ENST00000562710 TBC1D32Q96NH3 1257 aa27.73■■■□□ 2.03
LINC00565-201ENST00000562710 RTN4Q9NQC3 1192 aaKnown RBP27.73■■■□□ 2.03
LINC00565-201ENST00000562710 U2SURPO15042 1029 aaKnown RBP27.73■■■□□ 2.03
LINC00565-201ENST00000562710 TMPOP42166 694 aaKnown RBP27.73■■■□□ 2.03
LINC00565-201ENST00000562710 SRPK2P78362 688 aaKnown RBP27.73■■■□□ 2.03
LINC00565-201ENST00000562710 BRPF3Q9ULD4 1205 aa27.73■■■□□ 2.03
LINC00565-201ENST00000562710 COL3A1P02461 1466 aaPredicted RBP27.73■■■□□ 2.03
LINC00565-201ENST00000562710 RAPGEF3O95398 923 aa27.72■■■□□ 2.03
LINC00565-201ENST00000562710 GGNBP2Q9H3C7 697 aa27.72■■■□□ 2.03
LINC00565-201ENST00000562710 DIP2CQ9Y2E4 1556 aa27.71■■■□□ 2.03
LINC00565-201ENST00000562710 EXOSC9Q06265 439 aaKnown RBP27.71■■■□□ 2.03
LINC00565-201ENST00000562710 STK26Q9P289 416 aa27.71■■■□□ 2.03
LINC00565-201ENST00000562710 SMC4Q9NTJ3 1288 aa27.7■■■□□ 2.03
LINC00565-201ENST00000562710 TRIM35Q9UPQ4 493 aa27.7■■■□□ 2.03
LINC00565-201ENST00000562710 NEO1Q92859 1461 aa27.7■■■□□ 2.03
LINC00565-201ENST00000562710 ANKRD26Q9UPS8 1709 aa27.69■■■□□ 2.02
LINC00565-201ENST00000562710 SLC52A1Q9NWF4 448 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms