RNA–Protein interactions for RNA: ENST00000562354.2

CLUHP3-206, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 4,117 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-206ENST00000562354 NINLQ9Y2I6 1382 aa11.5□□□□□ -0.57
CLUHP3-206ENST00000562354 PPP2R1AP30153 589 aa11.5□□□□□ -0.57
CLUHP3-206ENST00000562354 PRDM15P57071 1507 aaPredicted RBP11.49□□□□□ -0.57
CLUHP3-206ENST00000562354 DDX11L8A8MPP1 907 aa11.49□□□□□ -0.57
CLUHP3-206ENST00000562354 SLC12A5Q9H2X9 1139 aa11.49□□□□□ -0.57
CLUHP3-206ENST00000562354 UGGT1Q9NYU2 1555 aa11.49□□□□□ -0.57
CLUHP3-206ENST00000562354 NEUROD2Q15784 382 aa11.49□□□□□ -0.57
CLUHP3-206ENST00000562354 CASC1Q6TDU7 716 aa11.49□□□□□ -0.57
CLUHP3-206ENST00000562354 RIMBP3CA6NJZ7 1639 aa11.49□□□□□ -0.57
CLUHP3-206ENST00000562354 RIMBP3BA6NNM3 1639 aa11.49□□□□□ -0.57
CLUHP3-206ENST00000562354 RIMBP3Q9UFD9 1639 aa11.49□□□□□ -0.57
CLUHP3-206ENST00000562354 IPO8O15397 1037 aaKnown RBP11.48□□□□□ -0.57
CLUHP3-206ENST00000562354 U2SURPO15042 1029 aaKnown RBP11.48□□□□□ -0.57
CLUHP3-206ENST00000562354 PLIN1O60240 522 aa11.48□□□□□ -0.57
CLUHP3-206ENST00000562354 NCLP19338 710 aaKnown RBP11.47□□□□□ -0.57
CLUHP3-206ENST00000562354 SLKQ9H2G2 1235 aaPredicted RBP11.47□□□□□ -0.57
CLUHP3-206ENST00000562354 E9PCH4 1651 aa11.47□□□□□ -0.57
CLUHP3-206ENST00000562354 CCDC146Q8IYE0 955 aa11.46□□□□□ -0.57
CLUHP3-206ENST00000562354 FAM43AQ8N2R8 423 aa11.46□□□□□ -0.57
CLUHP3-206ENST00000562354 CLTCL1P53675 1640 aa11.46□□□□□ -0.57
CLUHP3-206ENST00000562354 ABCC3O15438 1527 aa11.46□□□□□ -0.57
CLUHP3-206ENST00000562354 KIDINS220Q9ULH0 1771 aa11.46□□□□□ -0.58
CLUHP3-206ENST00000562354 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.46□□□□□ -0.58
CLUHP3-206ENST00000562354 SPHKAPQ2M3C7 1700 aa11.45□□□□□ -0.58
CLUHP3-206ENST00000562354 U2AF1L5P0DN76 240 aaPredicted RBP11.45□□□□□ -0.58
CLUHP3-206ENST00000562354 U2AF1Q01081 240 aaKnown RBP eCLIP11.45□□□□□ -0.58
CLUHP3-206ENST00000562354 MYOM2P54296 1465 aa11.45□□□□□ -0.58
CLUHP3-206ENST00000562354 PER1O15534 1290 aaPredicted RBP11.45□□□□□ -0.58
CLUHP3-206ENST00000562354 SKOR2Q2VWA4 1001 aaPredicted RBP11.44□□□□□ -0.58
CLUHP3-206ENST00000562354 C14orf37Q86TY3 774 aa11.44□□□□□ -0.58
CLUHP3-206ENST00000562354 ADAMTS8Q9UP79 889 aa11.44□□□□□ -0.58
CLUHP3-206ENST00000562354 RNF123Q5XPI4 1314 aa11.44□□□□□ -0.58
CLUHP3-206ENST00000562354 LMTK2Q8IWU2 1503 aa11.44□□□□□ -0.58
CLUHP3-206ENST00000562354 PARD3Q8TEW0 1356 aa11.44□□□□□ -0.58
CLUHP3-206ENST00000562354 TSPOAP1O95153 1857 aa11.44□□□□□ -0.58
CLUHP3-206ENST00000562354 TRPM1Q7Z4N2 1603 aa11.44□□□□□ -0.58
CLUHP3-206ENST00000562354 MSNP26038 577 aaKnown RBP11.44□□□□□ -0.58
CLUHP3-206ENST00000562354 TXNDC2Q86VQ3 553 aa11.44□□□□□ -0.58
CLUHP3-206ENST00000562354 CFAP65Q6ZU64 1925 aaKnown RBP11.44□□□□□ -0.58
CLUHP3-206ENST00000562354 HAP1P54257 671 aaPredicted RBP11.43□□□□□ -0.58
CLUHP3-206ENST00000562354 PDE3AQ14432 1141 aa11.43□□□□□ -0.58
CLUHP3-206ENST00000562354 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.43□□□□□ -0.58
CLUHP3-206ENST00000562354 ISY1Q9ULR0 285 aaKnown RBP11.43□□□□□ -0.58
CLUHP3-206ENST00000562354 NSD3Q9BZ95 1437 aa11.42□□□□□ -0.58
CLUHP3-206ENST00000562354 CHMP5Q9NZZ3 219 aa11.42□□□□□ -0.58
CLUHP3-206ENST00000562354 RNF17Q9BXT8 1623 aaKnown RBP11.42□□□□□ -0.58
CLUHP3-206ENST00000562354 ATAD2Q6PL18 1390 aa11.42□□□□□ -0.58
CLUHP3-206ENST00000562354 TNRQ92752 1358 aa11.42□□□□□ -0.58
CLUHP3-206ENST00000562354 CDK19Q9BWU1 502 aa11.42□□□□□ -0.58
CLUHP3-206ENST00000562354 SLC4A3P48751 1232 aa11.41□□□□□ -0.58
CLUHP3-206ENST00000562354 CALD1Q05682 793 aaKnown RBP11.41□□□□□ -0.58
CLUHP3-206ENST00000562354 BCORL1Q5H9F3 1711 aa11.41□□□□□ -0.58
CLUHP3-206ENST00000562354 ARHGAP31Q2M1Z3 1444 aa11.41□□□□□ -0.58
CLUHP3-206ENST00000562354 GLI2P10070 1586 aa11.41□□□□□ -0.58
CLUHP3-206ENST00000562354 DIP2CQ9Y2E4 1556 aa11.41□□□□□ -0.58
CLUHP3-206ENST00000562354 AMER1Q5JTC6 1135 aaPredicted RBP11.41□□□□□ -0.58
CLUHP3-206ENST00000562354 ZMYM3Q14202 1370 aa11.41□□□□□ -0.58
CLUHP3-206ENST00000562354 NUTM2FA1L443 756 aa11.41□□□□□ -0.58
CLUHP3-206ENST00000562354 GGNBP2Q9H3C7 697 aa11.41□□□□□ -0.58
CLUHP3-206ENST00000562354 ABCA6Q8N139 1617 aa11.41□□□□□ -0.58
CLUHP3-206ENST00000562354 KIF1BO60333 1816 aa11.41□□□□□ -0.58
CLUHP3-206ENST00000562354 APAF1O14727 1248 aa11.41□□□□□ -0.58
CLUHP3-206ENST00000562354 CEBPAP49715 358 aaPredicted RBP11.41□□□□□ -0.58
CLUHP3-206ENST00000562354 CLUAP1Q96AJ1 413 aa11.41□□□□□ -0.58
CLUHP3-206ENST00000562354 IL27Q8NEV9 243 aa11.4□□□□□ -0.58
CLUHP3-206ENST00000562354 INSRP06213 1382 aa11.4□□□□□ -0.58
CLUHP3-206ENST00000562354 RIMS2Q9UQ26 1411 aa11.4□□□□□ -0.58
CLUHP3-206ENST00000562354 PPRC1Q5VV67 1664 aaKnown RBP11.4□□□□□ -0.58
CLUHP3-206ENST00000562354 CDCA7LQ96GN5 454 aa11.4□□□□□ -0.59
CLUHP3-206ENST00000562354 DEPDC5O75140 1603 aa11.4□□□□□ -0.59
CLUHP3-206ENST00000562354 CEP152O94986 1710 aa11.39□□□□□ -0.59
CLUHP3-206ENST00000562354 THEMISQ8N1K5 641 aaPredicted RBP11.39□□□□□ -0.59
CLUHP3-206ENST00000562354 MTHFSP49914 203 aa11.39□□□□□ -0.59
CLUHP3-206ENST00000562354 KLHL34Q8N239 644 aa11.39□□□□□ -0.59
CLUHP3-206ENST00000562354 VWDEQ8N2E2 1590 aa11.39□□□□□ -0.59
CLUHP3-206ENST00000562354 PTMAP06454 111 aaKnown RBP11.39□□□□□ -0.59
CLUHP3-206ENST00000562354 WAPLQ7Z5K2 1190 aa11.39□□□□□ -0.59
CLUHP3-206ENST00000562354 CABP1Q9NZU7 370 aa11.39□□□□□ -0.59
CLUHP3-206ENST00000562354 ASXL1Q8IXJ9 1541 aa11.39□□□□□ -0.59
CLUHP3-206ENST00000562354 MADDQ8WXG6 1647 aa11.38□□□□□ -0.59
CLUHP3-206ENST00000562354 ZKSCAN2Q63HK3 967 aa11.38□□□□□ -0.59
CLUHP3-206ENST00000562354 DIP2BQ9P265 1576 aa11.37□□□□□ -0.59
CLUHP3-206ENST00000562354 PIK3C2GO75747 1445 aa11.37□□□□□ -0.59
CLUHP3-206ENST00000562354 MRE11P49959 708 aa11.37□□□□□ -0.59
CLUHP3-206ENST00000562354 HSP90AA2PQ14568 343 aaPredicted RBP11.37□□□□□ -0.59
CLUHP3-206ENST00000562354 SLC26A8Q96RN1 970 aa11.37□□□□□ -0.59
CLUHP3-206ENST00000562354 MAP3K4Q9Y6R4 1608 aa11.37□□□□□ -0.59
CLUHP3-206ENST00000562354 MFAP1P55081 439 aaKnown RBP11.37□□□□□ -0.59
CLUHP3-206ENST00000562354 SBNO2Q9Y2G9 1366 aa11.37□□□□□ -0.59
CLUHP3-206ENST00000562354 SOX12O15370 315 aa11.37□□□□□ -0.59
CLUHP3-206ENST00000562354 PUS7Q96PZ0 661 aaKnown RBP11.37□□□□□ -0.59
CLUHP3-206ENST00000562354 BRPF3Q9ULD4 1205 aa11.36□□□□□ -0.59
CLUHP3-206ENST00000562354 RRP7AQ9Y3A4 280 aaKnown RBP11.36□□□□□ -0.59
CLUHP3-206ENST00000562354 ADGRB3O60242 1522 aa11.36□□□□□ -0.59
CLUHP3-206ENST00000562354 COG3Q96JB2 828 aa11.36□□□□□ -0.59
CLUHP3-206ENST00000562354 SMC4Q9NTJ3 1288 aa11.36□□□□□ -0.59
CLUHP3-206ENST00000562354 ERVK-7P63135 1459 aa11.36□□□□□ -0.59
CLUHP3-206ENST00000562354 FRMPD1Q5SYB0 1578 aa11.36□□□□□ -0.59
CLUHP3-206ENST00000562354 NGDNQ8NEJ9 315 aaKnown RBP11.36□□□□□ -0.59
CLUHP3-206ENST00000562354 GZF1Q9H116 711 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms