RNA–Protein interactions for RNA: ENST00000562100.5

PDPR-204, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, human

TSL 5

Gene PDPR, Length 1,643 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDPR-204	ENST00000562100	TRAK1	Q9UPV9	953 aa		12.21	□□□□□ -0.46
PDPR-204	ENST00000562100	NRXN3	Q9Y4C0	1643 aa		12.2	□□□□□ -0.46
PDPR-204	ENST00000562100	EVC2	Q86UK5	1308 aa		12.2	□□□□□ -0.46
PDPR-204	ENST00000562100	PDE3B	Q13370	1112 aa		12.2	□□□□□ -0.46
PDPR-204	ENST00000562100	KIF20B	Q96Q89	1820 aa		12.2	□□□□□ -0.46
PDPR-204	ENST00000562100	YTHDC2	Q9H6S0	1430 aa	Known RBP	12.19	□□□□□ -0.46
PDPR-204	ENST00000562100	PPP2R1A	P30153	589 aa		12.19	□□□□□ -0.46
PDPR-204	ENST00000562100	RIMS2	Q9UQ26	1411 aa		12.18	□□□□□ -0.46
PDPR-204	ENST00000562100	SHPRH	Q149N8	1683 aa		12.18	□□□□□ -0.46
PDPR-204	ENST00000562100	TMEM132E	Q6IEE7	984 aa		12.18	□□□□□ -0.46
PDPR-204	ENST00000562100	SLIT1	O75093	1534 aa		12.18	□□□□□ -0.46
PDPR-204	ENST00000562100	ARHGAP23	Q9P227	1491 aa		12.17	□□□□□ -0.46
PDPR-204	ENST00000562100	NSD2	O96028	1365 aa		12.17	□□□□□ -0.46
PDPR-204	ENST00000562100	ANKRD36B	Q8N2N9	1353 aa		12.16	□□□□□ -0.46
PDPR-204	ENST00000562100	RNF123	Q5XPI4	1314 aa		12.16	□□□□□ -0.46
PDPR-204	ENST00000562100	STAG3	Q9UJ98	1225 aa		12.16	□□□□□ -0.46
PDPR-204	ENST00000562100	NSD3	Q9BZ95	1437 aa		12.16	□□□□□ -0.46
PDPR-204	ENST00000562100	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	12.15	□□□□□ -0.47
PDPR-204	ENST00000562100	BCAN	Q96GW7	911 aa		12.15	□□□□□ -0.47
PDPR-204	ENST00000562100	ATAD2	Q6PL18	1390 aa		12.14	□□□□□ -0.47
PDPR-204	ENST00000562100	MED14	O60244	1454 aa		12.14	□□□□□ -0.47
PDPR-204	ENST00000562100	WDR43	Q15061	677 aa	Known RBP eCLIP	12.14	□□□□□ -0.47
PDPR-204	ENST00000562100	NUTM2D	Q5VT03	806 aa	Predicted RBP	12.14	□□□□□ -0.47
PDPR-204	ENST00000562100	CARD14	Q9BXL6	1004 aa		12.14	□□□□□ -0.47
PDPR-204	ENST00000562100	CPS1	P31327	1500 aa		12.14	□□□□□ -0.47
PDPR-204	ENST00000562100	POLR3A	O14802	1390 aa	Predicted RBP	12.13	□□□□□ -0.47
PDPR-204	ENST00000562100	PPP4R2	Q9NY27	417 aa		12.12	□□□□□ -0.47
PDPR-204	ENST00000562100	CGNL1	Q0VF96	1302 aa		12.12	□□□□□ -0.47
PDPR-204	ENST00000562100	ITSN1	Q15811	1721 aa		12.11	□□□□□ -0.47
PDPR-204	ENST00000562100	HDGF	P51858	240 aa	Known RBP	12.11	□□□□□ -0.47
PDPR-204	ENST00000562100	THEMIS	Q8N1K5	641 aa	Predicted RBP	12.11	□□□□□ -0.47
PDPR-204	ENST00000562100	NGEF	Q8N5V2	710 aa		12.11	□□□□□ -0.47
PDPR-204	ENST00000562100	AKAP12	Q02952	1782 aa		12.11	□□□□□ -0.47
PDPR-204	ENST00000562100	TECPR2	O15040	1411 aa		12.1	□□□□□ -0.47
PDPR-204	ENST00000562100	ABCC11	Q96J66	1382 aa		12.1	□□□□□ -0.47
PDPR-204	ENST00000562100	TMEM2	Q9UHN6	1383 aa		12.1	□□□□□ -0.47
PDPR-204	ENST00000562100	ATP7B	P35670	1465 aa		12.09	□□□□□ -0.47
PDPR-204	ENST00000562100	MON2	Q7Z3U7	1717 aa		12.09	□□□□□ -0.47
PDPR-204	ENST00000562100	SLC12A5	Q9H2X9	1139 aa		12.09	□□□□□ -0.47
PDPR-204	ENST00000562100	ADAMTS8	Q9UP79	889 aa		12.09	□□□□□ -0.47
PDPR-204	ENST00000562100	ADGRB2	O60241	1585 aa		12.09	□□□□□ -0.47
PDPR-204	ENST00000562100	POGK	Q9P215	609 aa		12.08	□□□□□ -0.48
PDPR-204	ENST00000562100	FAM135B	Q49AJ0	1406 aa		12.08	□□□□□ -0.48
PDPR-204	ENST00000562100	LTBP4	Q8N2S1	1624 aa		12.08	□□□□□ -0.48
PDPR-204	ENST00000562100	MORC1	Q86VD1	984 aa		12.08	□□□□□ -0.48
PDPR-204	ENST00000562100	PRAM1	Q96QH2	718 aa		12.08	□□□□□ -0.48
PDPR-204	ENST00000562100	STK26	Q9P289	416 aa		12.08	□□□□□ -0.48
PDPR-204	ENST00000562100	DMRT2	Q9Y5R5	561 aa		12.08	□□□□□ -0.48
PDPR-204	ENST00000562100	NCKAP5L	Q9HCH0	1330 aa		12.07	□□□□□ -0.48
PDPR-204	ENST00000562100	DIP2A	Q14689	1571 aa		12.07	□□□□□ -0.48
PDPR-204	ENST00000562100	NPHP4	O75161	1426 aa	Predicted RBP	12.07	□□□□□ -0.48
PDPR-204	ENST00000562100	CD163L1	Q9NR16	1453 aa		12.07	□□□□□ -0.48
PDPR-204	ENST00000562100		A0A1W2PP64	1363 aa		12.06	□□□□□ -0.48
PDPR-204	ENST00000562100	IRX6	P78412	446 aa	Predicted RBP	12.06	□□□□□ -0.48
PDPR-204	ENST00000562100	SIRT1	Q96EB6	747 aa		12.06	□□□□□ -0.48
PDPR-204	ENST00000562100	TERF2IP	Q9NYB0	399 aa		12.06	□□□□□ -0.48
PDPR-204	ENST00000562100	TOPAZ1	Q8N9V7	1692 aa		12.05	□□□□□ -0.48
PDPR-204	ENST00000562100	SRPK2	P78362	688 aa	Known RBP	12.05	□□□□□ -0.48
PDPR-204	ENST00000562100	CABP2	Q9NPB3	220 aa		12.05	□□□□□ -0.48
PDPR-204	ENST00000562100	MAP2	P11137	1827 aa	Known RBP	12.05	□□□□□ -0.48
PDPR-204	ENST00000562100	ANKLE2	Q86XL3	938 aa		12.04	□□□□□ -0.48
PDPR-204	ENST00000562100	RCAN3	Q9UKA8	241 aa		12.04	□□□□□ -0.48
PDPR-204	ENST00000562100	MINK1	Q8N4C8	1332 aa	Predicted RBP	12.04	□□□□□ -0.48
PDPR-204	ENST00000562100	ZNF521	Q96K83	1311 aa		12.04	□□□□□ -0.48
PDPR-204	ENST00000562100	PLEKHG1	Q9ULL1	1385 aa		12.04	□□□□□ -0.48
PDPR-204	ENST00000562100	STRCP1	A6NGW2	1772 aa		12.04	□□□□□ -0.48
PDPR-204	ENST00000562100	CDC42BPG	Q6DT37	1551 aa		12.04	□□□□□ -0.48
PDPR-204	ENST00000562100	LTK	P29376	864 aa		12.04	□□□□□ -0.48
PDPR-204	ENST00000562100	CFAP53	Q96M91	514 aa		12.04	□□□□□ -0.48
PDPR-204	ENST00000562100	PLEKHH1	Q9ULM0	1364 aa		12.03	□□□□□ -0.48
PDPR-204	ENST00000562100	RRP1	P56182	461 aa	Known RBP	12.03	□□□□□ -0.48
PDPR-204	ENST00000562100	IQSEC2	Q5JU85	1478 aa		12.03	□□□□□ -0.48
PDPR-204	ENST00000562100	SAFB2	Q14151	953 aa	Known RBP eCLIP	12.02	□□□□□ -0.49
PDPR-204	ENST00000562100	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	12.02	□□□□□ -0.49
PDPR-204	ENST00000562100	TSHZ2	Q9NRE2	1034 aa		12.02	□□□□□ -0.49
PDPR-204	ENST00000562100	CDK19	Q9BWU1	502 aa		12.01	□□□□□ -0.49
PDPR-204	ENST00000562100	ADAMTS13	Q76LX8	1427 aa		12.01	□□□□□ -0.49
PDPR-204	ENST00000562100	NWD1	Q149M9	1564 aa		12.01	□□□□□ -0.49
PDPR-204	ENST00000562100	COL3A1	P02461	1466 aa	Predicted RBP	12	□□□□□ -0.49
PDPR-204	ENST00000562100	MET	P08581	1390 aa		12	□□□□□ -0.49
PDPR-204	ENST00000562100	GOLGA2	Q08379	1002 aa		12	□□□□□ -0.49
PDPR-204	ENST00000562100	NCBP3	Q53F19	620 aa	Known RBP	12	□□□□□ -0.49
PDPR-204	ENST00000562100	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	12	□□□□□ -0.49
PDPR-204	ENST00000562100	SALL2	Q9Y467	1007 aa	Predicted RBP	12	□□□□□ -0.49
PDPR-204	ENST00000562100	TXNDC2	Q86VQ3	553 aa		12	□□□□□ -0.49
PDPR-204	ENST00000562100	XRN1	Q8IZH2	1706 aa	Known RBP	11.99	□□□□□ -0.49
PDPR-204	ENST00000562100	NRK	Q7Z2Y5	1582 aa		11.99	□□□□□ -0.49
PDPR-204	ENST00000562100	CDCA7L	Q96GN5	454 aa		11.99	□□□□□ -0.49
PDPR-204	ENST00000562100	EID1	Q9Y6B2	187 aa		11.99	□□□□□ -0.49
PDPR-204	ENST00000562100	EDC4	Q6P2E9	1401 aa	Known RBP	11.98	□□□□□ -0.49
PDPR-204	ENST00000562100	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	11.98	□□□□□ -0.49
PDPR-204	ENST00000562100	SENP3-EIF4A1	A0A087X0R7	540 aa		11.98	□□□□□ -0.49
PDPR-204	ENST00000562100	NKTR	P30414	1462 aa	Known RBP	11.98	□□□□□ -0.49
PDPR-204	ENST00000562100	CHD2	O14647	1828 aa	Known RBP	11.98	□□□□□ -0.49
PDPR-204	ENST00000562100	CPSF1	Q10570	1443 aa	Known RBP	11.98	□□□□□ -0.49
PDPR-204	ENST00000562100	WASL	O00401	505 aa	Predicted RBP	11.97	□□□□□ -0.49
PDPR-204	ENST00000562100	MTHFS	P49914	203 aa		11.97	□□□□□ -0.49
PDPR-204	ENST00000562100	XIRP1	Q702N8	1843 aa	Known RBP	11.97	□□□□□ -0.49
PDPR-204	ENST00000562100	SLFN5	Q08AF3	891 aa		11.97	□□□□□ -0.49
PDPR-204	ENST00000562100	DUSP27	Q5VZP5	1158 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms