RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 POLR3AO14802 1390 aaPredicted RBP13.02□□□□□ -0.32
SMG1-205ENST00000561947 NINLQ9Y2I6 1382 aa13.02□□□□□ -0.32
SMG1-205ENST00000561947 B4GALNT3Q6L9W6 998 aa13.02□□□□□ -0.32
SMG1-205ENST00000561947 SENP3Q9H4L4 574 aaPredicted RBP13.02□□□□□ -0.32
SMG1-205ENST00000561947 RRP1P56182 461 aaKnown RBP13.02□□□□□ -0.33
SMG1-205ENST00000561947 SAFB2Q14151 953 aaKnown RBP eCLIP13.02□□□□□ -0.33
SMG1-205ENST00000561947 CABP2Q9NPB3 220 aa13.02□□□□□ -0.33
SMG1-205ENST00000561947 MORC1Q86VD1 984 aa13.01□□□□□ -0.33
SMG1-205ENST00000561947 CGNL1Q0VF96 1302 aa13.01□□□□□ -0.33
SMG1-205ENST00000561947 ZMYM3Q14202 1370 aa13.01□□□□□ -0.33
SMG1-205ENST00000561947 PLEKHH1Q9ULM0 1364 aa13.01□□□□□ -0.33
SMG1-205ENST00000561947 ESF1Q9H501 851 aaKnown RBP13.01□□□□□ -0.33
SMG1-205ENST00000561947 DLC1Q96QB1 1528 aa13.01□□□□□ -0.33
SMG1-205ENST00000561947 SHPRHQ149N8 1683 aa13.01□□□□□ -0.33
SMG1-205ENST00000561947 NSD2O96028 1365 aa13□□□□□ -0.33
SMG1-205ENST00000561947 PRAM1Q96QH2 718 aa13□□□□□ -0.33
SMG1-205ENST00000561947 NRXN3Q9Y4C0 1643 aa13□□□□□ -0.33
SMG1-205ENST00000561947 ATAD2Q6PL18 1390 aa12.99□□□□□ -0.33
SMG1-205ENST00000561947 ZNF521Q96K83 1311 aa12.99□□□□□ -0.33
SMG1-205ENST00000561947 POGKQ9P215 609 aa12.99□□□□□ -0.33
SMG1-205ENST00000561947 MINK1Q8N4C8 1332 aaPredicted RBP12.98□□□□□ -0.33
SMG1-205ENST00000561947 SRPK2P78362 688 aaKnown RBP12.98□□□□□ -0.33
SMG1-205ENST00000561947 A0A1W2PP64 1363 aa12.97□□□□□ -0.33
SMG1-205ENST00000561947 CCDC146Q8IYE0 955 aa12.97□□□□□ -0.33
SMG1-205ENST00000561947 ANKRD26Q9UPS8 1709 aa12.97□□□□□ -0.33
SMG1-205ENST00000561947 TNRQ92752 1358 aa12.97□□□□□ -0.33
SMG1-205ENST00000561947 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.96□□□□□ -0.33
SMG1-205ENST00000561947 ABCC11Q96J66 1382 aa12.96□□□□□ -0.33
SMG1-205ENST00000561947 UBR1Q8IWV7 1749 aa12.96□□□□□ -0.34
SMG1-205ENST00000561947 TNNT2P45379 298 aaPredicted RBP12.95□□□□□ -0.34
SMG1-205ENST00000561947 GOLGA2Q08379 1002 aa12.95□□□□□ -0.34
SMG1-205ENST00000561947 CD163L1Q9NR16 1453 aa12.95□□□□□ -0.34
SMG1-205ENST00000561947 KNDC1Q76NI1 1749 aa12.95□□□□□ -0.34
SMG1-205ENST00000561947 NGEFQ8N5V2 710 aa12.95□□□□□ -0.34
SMG1-205ENST00000561947 CCDC136Q96JN2 1154 aa12.95□□□□□ -0.34
SMG1-205ENST00000561947 APAF1O14727 1248 aa12.94□□□□□ -0.34
SMG1-205ENST00000561947 DUSP27Q5VZP5 1158 aa12.94□□□□□ -0.34
SMG1-205ENST00000561947 CDK19Q9BWU1 502 aa12.94□□□□□ -0.34
SMG1-205ENST00000561947 TERF2IPQ9NYB0 399 aa12.94□□□□□ -0.34
SMG1-205ENST00000561947 RBM19Q9Y4C8 960 aaKnown RBP12.94□□□□□ -0.34
SMG1-205ENST00000561947 MED14O60244 1454 aa12.93□□□□□ -0.34
SMG1-205ENST00000561947 KIF20BQ96Q89 1820 aa12.93□□□□□ -0.34
SMG1-205ENST00000561947 MTHFSP49914 203 aa12.93□□□□□ -0.34
SMG1-205ENST00000561947 SLFN5Q08AF3 891 aa12.92□□□□□ -0.34
SMG1-205ENST00000561947 CFAP53Q96M91 514 aa12.92□□□□□ -0.34
SMG1-205ENST00000561947 HDGFP51858 240 aaKnown RBP12.92□□□□□ -0.34
SMG1-205ENST00000561947 TRMT2AQ8IZ69 625 aaKnown RBP12.91□□□□□ -0.34
SMG1-205ENST00000561947 EXOC6Q8TAG9 804 aa12.91□□□□□ -0.34
SMG1-205ENST00000561947 NLRP1Q9C000 1473 aa12.91□□□□□ -0.34
SMG1-205ENST00000561947 WAPLQ7Z5K2 1190 aa12.91□□□□□ -0.34
SMG1-205ENST00000561947 METP08581 1390 aa12.91□□□□□ -0.34
SMG1-205ENST00000561947 IQSEC2Q5JU85 1478 aa12.9□□□□□ -0.34
SMG1-205ENST00000561947 HDGFL2Q7Z4V5 671 aaPredicted RBP12.9□□□□□ -0.34
SMG1-205ENST00000561947 TMEM2Q9UHN6 1383 aa12.9□□□□□ -0.34
SMG1-205ENST00000561947 ATP7BP35670 1465 aa12.9□□□□□ -0.34
SMG1-205ENST00000561947 TECPR2O15040 1411 aa12.9□□□□□ -0.34
SMG1-205ENST00000561947 CPS1P31327 1500 aa12.9□□□□□ -0.35
SMG1-205ENST00000561947 RUNDC1Q96C34 613 aa12.89□□□□□ -0.35
SMG1-205ENST00000561947 FAM135BQ49AJ0 1406 aa12.89□□□□□ -0.35
SMG1-205ENST00000561947 NKTRP30414 1462 aaKnown RBP12.88□□□□□ -0.35
SMG1-205ENST00000561947 GGNBP2Q9H3C7 697 aa12.88□□□□□ -0.35
SMG1-205ENST00000561947 C3P01024 1663 aa12.88□□□□□ -0.35
SMG1-205ENST00000561947 E9PSI1 815 aa12.88□□□□□ -0.35
SMG1-205ENST00000561947 FYB1O15117 783 aa12.88□□□□□ -0.35
SMG1-205ENST00000561947 PLIN1O60240 522 aa12.88□□□□□ -0.35
SMG1-205ENST00000561947 CABP1Q9NZU7 370 aa12.88□□□□□ -0.35
SMG1-205ENST00000561947 SIRT1Q96EB6 747 aa12.87□□□□□ -0.35
SMG1-205ENST00000561947 SPINK5Q9NQ38 1064 aaPredicted RBP12.87□□□□□ -0.35
SMG1-205ENST00000561947 FER1L4A9Z1Z3 1794 aa12.87□□□□□ -0.35
SMG1-205ENST00000561947 COL3A1P02461 1466 aaPredicted RBP12.87□□□□□ -0.35
SMG1-205ENST00000561947 WWC1Q8IX03 1113 aa12.86□□□□□ -0.35
SMG1-205ENST00000561947 ADGRB2O60241 1585 aa12.86□□□□□ -0.35
SMG1-205ENST00000561947 ADAMTS13Q76LX8 1427 aa12.85□□□□□ -0.35
SMG1-205ENST00000561947 WASLO00401 505 aaPredicted RBP12.85□□□□□ -0.35
SMG1-205ENST00000561947 TXNDC2Q86VQ3 553 aa12.85□□□□□ -0.35
SMG1-205ENST00000561947 DMRT2Q9Y5R5 561 aa12.85□□□□□ -0.35
SMG1-205ENST00000561947 TCP11L2Q8N4U5 519 aa12.85□□□□□ -0.35
SMG1-205ENST00000561947 CRBNQ96SW2 442 aa12.85□□□□□ -0.35
SMG1-205ENST00000561947 PLEKHG1Q9ULL1 1385 aa12.84□□□□□ -0.35
SMG1-205ENST00000561947 NCBP3Q53F19 620 aaKnown RBP12.84□□□□□ -0.35
SMG1-205ENST00000561947 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.84□□□□□ -0.35
SMG1-205ENST00000561947 PHF23Q9BUL5 403 aaPredicted RBP12.84□□□□□ -0.35
SMG1-205ENST00000561947 CPSF1Q10570 1443 aaKnown RBP12.83□□□□□ -0.36
SMG1-205ENST00000561947 PPIP5K1Q6PFW1 1433 aa12.83□□□□□ -0.36
SMG1-205ENST00000561947 MON2Q7Z3U7 1717 aa12.83□□□□□ -0.36
SMG1-205ENST00000561947 CDC42BPGQ6DT37 1551 aa12.83□□□□□ -0.36
SMG1-205ENST00000561947 U2AF1L5P0DN76 240 aaPredicted RBP12.83□□□□□ -0.36
SMG1-205ENST00000561947 CEBPAP49715 358 aaPredicted RBP12.83□□□□□ -0.36
SMG1-205ENST00000561947 U2AF1Q01081 240 aaKnown RBP eCLIP12.83□□□□□ -0.36
SMG1-205ENST00000561947 AKAP12Q02952 1782 aa12.83□□□□□ -0.36
SMG1-205ENST00000561947 CCDC27Q2M243 656 aa12.82□□□□□ -0.36
SMG1-205ENST00000561947 RRP7AQ9Y3A4 280 aaKnown RBP12.82□□□□□ -0.36
SMG1-205ENST00000561947 ITSN1Q15811 1721 aa12.82□□□□□ -0.36
SMG1-205ENST00000561947 EDC4Q6P2E9 1401 aaKnown RBP12.82□□□□□ -0.36
SMG1-205ENST00000561947 C20orf194Q5TEA3 1177 aa12.82□□□□□ -0.36
SMG1-205ENST00000561947 SLIT1O75093 1534 aa12.82□□□□□ -0.36
SMG1-205ENST00000561947 WDR63Q8IWG1 891 aa12.81□□□□□ -0.36
SMG1-205ENST00000561947 ARHGAP23Q9P227 1491 aa12.81□□□□□ -0.36
SMG1-205ENST00000561947 PNPLA6Q8IY17 1366 aa12.81□□□□□ -0.36
SMG1-205ENST00000561947 ROBO2Q9HCK4 1378 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms