RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 PTCH1Q13635 1447 aa16.19■□□□□ 0.18
AC087878.1-201ENST00000560709 RALBP1Q15311 655 aa16.19■□□□□ 0.18
AC087878.1-201ENST00000560709 TULP4Q9NRJ4 1543 aa16.19■□□□□ 0.18
AC087878.1-201ENST00000560709 NPC1L1Q9UHC9 1359 aa16.18■□□□□ 0.18
AC087878.1-201ENST00000560709 PANK3Q9H999 370 aa16.17■□□□□ 0.18
AC087878.1-201ENST00000560709 MYOM1P52179 1685 aa16.17■□□□□ 0.18
AC087878.1-201ENST00000560709 PER1O15534 1290 aaPredicted RBP16.16■□□□□ 0.18
AC087878.1-201ENST00000560709 KNSTRNQ9Y448 316 aa16.15■□□□□ 0.18
AC087878.1-201ENST00000560709 NPHP4O75161 1426 aaPredicted RBP16.14■□□□□ 0.17
AC087878.1-201ENST00000560709 ADGRB2O60241 1585 aa16.13■□□□□ 0.17
AC087878.1-201ENST00000560709 MINK1Q8N4C8 1332 aaPredicted RBP16.13■□□□□ 0.17
AC087878.1-201ENST00000560709 ANKRD36BQ8N2N9 1353 aa16.13■□□□□ 0.17
AC087878.1-201ENST00000560709 PARD3Q8TEW0 1356 aa16.13■□□□□ 0.17
AC087878.1-201ENST00000560709 XRN1Q8IZH2 1706 aaKnown RBP16.12■□□□□ 0.17
AC087878.1-201ENST00000560709 SRPK2P78362 688 aaKnown RBP16.12■□□□□ 0.17
AC087878.1-201ENST00000560709 SLC26A8Q96RN1 970 aa16.12■□□□□ 0.17
AC087878.1-201ENST00000560709 SAFB2Q14151 953 aaKnown RBP eCLIP16.11■□□□□ 0.17
AC087878.1-201ENST00000560709 MYBBP1AQ9BQG0 1328 aaKnown RBP16.11■□□□□ 0.17
AC087878.1-201ENST00000560709 ROBO2Q9HCK4 1378 aa16.11■□□□□ 0.17
AC087878.1-201ENST00000560709 PTPRUQ92729 1446 aa16.11■□□□□ 0.17
AC087878.1-201ENST00000560709 AMOTL2Q9Y2J4 779 aa16.1■□□□□ 0.17
AC087878.1-201ENST00000560709 PLEKHH1Q9ULM0 1364 aa16.1■□□□□ 0.17
AC087878.1-201ENST00000560709 WASLO00401 505 aaPredicted RBP16.09■□□□□ 0.17
AC087878.1-201ENST00000560709 WAPLQ7Z5K2 1190 aa16.09■□□□□ 0.17
AC087878.1-201ENST00000560709 CDK19Q9BWU1 502 aa16.09■□□□□ 0.17
AC087878.1-201ENST00000560709 NSD2O96028 1365 aa16.09■□□□□ 0.17
AC087878.1-201ENST00000560709 USP32Q8NFA0 1604 aa16.08■□□□□ 0.17
AC087878.1-201ENST00000560709 KDM4FA0A1W2PPD8 638 aa16.08■□□□□ 0.16
AC087878.1-201ENST00000560709 TMC1Q8TDI8 760 aa16.08■□□□□ 0.16
AC087878.1-201ENST00000560709 TERF2IPQ9NYB0 399 aa16.08■□□□□ 0.16
AC087878.1-201ENST00000560709 AMER1Q5JTC6 1135 aaPredicted RBP16.07■□□□□ 0.16
AC087878.1-201ENST00000560709 CABP2Q9NPB3 220 aa16.07■□□□□ 0.16
AC087878.1-201ENST00000560709 BRD4O60885 1362 aaPredicted RBP16.07■□□□□ 0.16
AC087878.1-201ENST00000560709 ATP7BP35670 1465 aa16.07■□□□□ 0.16
AC087878.1-201ENST00000560709 NLRP13Q86W25 1043 aa16.06■□□□□ 0.16
AC087878.1-201ENST00000560709 CGNL1Q0VF96 1302 aa16.05■□□□□ 0.16
AC087878.1-201ENST00000560709 HDGFL2Q7Z4V5 671 aaPredicted RBP16.05■□□□□ 0.16
AC087878.1-201ENST00000560709 SLC12A5Q9H2X9 1139 aa16.05■□□□□ 0.16
AC087878.1-201ENST00000560709 NWD1Q149M9 1564 aa16.04■□□□□ 0.16
AC087878.1-201ENST00000560709 NSD3Q9BZ95 1437 aa16.04■□□□□ 0.16
AC087878.1-201ENST00000560709 YTHDC1Q96MU7 727 aaKnown RBP16.04■□□□□ 0.16
AC087878.1-201ENST00000560709 MRS2Q9HD23 443 aa16.04■□□□□ 0.16
AC087878.1-201ENST00000560709 KCNA6P17658 529 aa16.03■□□□□ 0.16
AC087878.1-201ENST00000560709 CHD2O14647 1828 aaKnown RBP16.03■□□□□ 0.16
AC087878.1-201ENST00000560709 CCDC61Q9Y6R9 512 aa16.02■□□□□ 0.16
AC087878.1-201ENST00000560709 NKTRP30414 1462 aaKnown RBP16.02■□□□□ 0.15
AC087878.1-201ENST00000560709 ANKARQ7Z5J8 1434 aa16.02■□□□□ 0.15
AC087878.1-201ENST00000560709 CC2D1BQ5T0F9 858 aaKnown RBP16.01■□□□□ 0.15
AC087878.1-201ENST00000560709 CARD14Q9BXL6 1004 aa16.01■□□□□ 0.15
AC087878.1-201ENST00000560709 LMTK3Q96Q04 1460 aa16.01■□□□□ 0.15
AC087878.1-201ENST00000560709 A0A1W2PP64 1363 aa16■□□□□ 0.15
AC087878.1-201ENST00000560709 NCKAP5LQ9HCH0 1330 aa16■□□□□ 0.15
AC087878.1-201ENST00000560709 SIPA1L2Q9P2F8 1722 aaPredicted RBP16■□□□□ 0.15
AC087878.1-201ENST00000560709 PPIP5K1Q6PFW1 1433 aa16■□□□□ 0.15
AC087878.1-201ENST00000560709 NUDT16Q96DE0 195 aaKnown RBP15.99■□□□□ 0.15
AC087878.1-201ENST00000560709 CDC42BPGQ6DT37 1551 aa15.99■□□□□ 0.15
AC087878.1-201ENST00000560709 CD163L1Q9NR16 1453 aa15.98■□□□□ 0.15
AC087878.1-201ENST00000560709 ZNF692Q9BU19 519 aaPredicted RBP15.98■□□□□ 0.15
AC087878.1-201ENST00000560709 CABP1Q9NZU7 370 aa15.98■□□□□ 0.15
AC087878.1-201ENST00000560709 NCOA3Q9Y6Q9 1424 aa15.98■□□□□ 0.15
AC087878.1-201ENST00000560709 INSRP06213 1382 aa15.98■□□□□ 0.15
AC087878.1-201ENST00000560709 CPSF1Q10570 1443 aaKnown RBP15.97■□□□□ 0.15
AC087878.1-201ENST00000560709 TOPAZ1Q8N9V7 1692 aa15.96■□□□□ 0.15
AC087878.1-201ENST00000560709 EDC4Q6P2E9 1401 aaKnown RBP15.96■□□□□ 0.15
AC087878.1-201ENST00000560709 ADGRL3Q9HAR2 1447 aa15.96■□□□□ 0.15
AC087878.1-201ENST00000560709 ITSN1Q15811 1721 aa15.95■□□□□ 0.14
AC087878.1-201ENST00000560709 PLEKHG3A1L390 1219 aa15.95■□□□□ 0.14
AC087878.1-201ENST00000560709 PPP2R1AP30153 589 aa15.94■□□□□ 0.14
AC087878.1-201ENST00000560709 CNGB1Q14028 1251 aaPredicted RBP15.94■□□□□ 0.14
AC087878.1-201ENST00000560709 MORC1Q86VD1 984 aa15.94■□□□□ 0.14
AC087878.1-201ENST00000560709 PIAS4Q8N2W9 510 aaPredicted RBP15.92■□□□□ 0.14
AC087878.1-201ENST00000560709 PNISRQ8TF01 805 aaKnown RBP15.92■□□□□ 0.14
AC087878.1-201ENST00000560709 PRR36Q9H6K5 1346 aa15.92■□□□□ 0.14
AC087878.1-201ENST00000560709 FMN2Q9NZ56 1722 aa15.91■□□□□ 0.14
AC087878.1-201ENST00000560709 CCDC184Q52MB2 194 aa15.91■□□□□ 0.14
AC087878.1-201ENST00000560709 MON2Q7Z3U7 1717 aa15.91■□□□□ 0.14
AC087878.1-201ENST00000560709 POLR3AO14802 1390 aaPredicted RBP15.9■□□□□ 0.14
AC087878.1-201ENST00000560709 DCCP43146 1447 aa15.9■□□□□ 0.14
AC087878.1-201ENST00000560709 ANKRD26Q9UPS8 1709 aa15.9■□□□□ 0.14
AC087878.1-201ENST00000560709 SCAF1Q9H7N4 1312 aaKnown RBP15.9■□□□□ 0.14
AC087878.1-201ENST00000560709 AKAP12Q02952 1782 aa15.9■□□□□ 0.14
AC087878.1-201ENST00000560709 NALCNQ8IZF0 1738 aa15.89■□□□□ 0.13
AC087878.1-201ENST00000560709 HSPA2P54652 639 aa15.89■□□□□ 0.13
AC087878.1-201ENST00000560709 FAM9BQ8IZU0 186 aa15.89■□□□□ 0.13
AC087878.1-201ENST00000560709 DMRT2Q9Y5R5 561 aa15.89■□□□□ 0.13
AC087878.1-201ENST00000560709 TTC21AQ8NDW8 1320 aa15.88■□□□□ 0.13
AC087878.1-201ENST00000560709 KIF20BQ96Q89 1820 aa15.87■□□□□ 0.13
AC087878.1-201ENST00000560709 USP6P35125 1406 aa15.87■□□□□ 0.13
AC087878.1-201ENST00000560709 FYB1O15117 783 aa15.87■□□□□ 0.13
AC087878.1-201ENST00000560709 PROSER2Q86WR7 435 aaPredicted RBP15.87■□□□□ 0.13
AC087878.1-201ENST00000560709 C14orf37Q86TY3 774 aa15.86■□□□□ 0.13
AC087878.1-201ENST00000560709 CFAP53Q96M91 514 aa15.86■□□□□ 0.13
AC087878.1-201ENST00000560709 ACEP12821 1306 aa15.86■□□□□ 0.13
AC087878.1-201ENST00000560709 HNRNPUQ00839 825 aaKnown RBP eCLIP15.85■□□□□ 0.13
AC087878.1-201ENST00000560709 C19orf44Q9H6X5 657 aa15.85■□□□□ 0.13
AC087878.1-201ENST00000560709 STRCQ7RTU9 1775 aa15.85■□□□□ 0.13
AC087878.1-201ENST00000560709 NRKQ7Z2Y5 1582 aa15.84■□□□□ 0.13
AC087878.1-201ENST00000560709 WDR43Q15061 677 aaKnown RBP eCLIP15.84■□□□□ 0.13
AC087878.1-201ENST00000560709 NGDNQ8NEJ9 315 aaKnown RBP15.83■□□□□ 0.12
AC087878.1-201ENST00000560709 GGNBP2Q9H3C7 697 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms