RNA–Protein interactions for RNA: ENST00000560542.1

IRF9-210, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-210ENST00000560542 MYOM2P54296 1465 aa21.71■■□□□ 1.07
IRF9-210ENST00000560542 NPHP3Q7Z494 1330 aa21.69■■□□□ 1.06
IRF9-210ENST00000560542 CDC42BPGQ6DT37 1551 aa21.69■■□□□ 1.06
IRF9-210ENST00000560542 ITGAEP38570 1179 aa21.68■■□□□ 1.06
IRF9-210ENST00000560542 RPGRIP1LQ68CZ1 1315 aa21.68■■□□□ 1.06
IRF9-210ENST00000560542 BCL9LQ86UU0 1499 aa21.66■■□□□ 1.06
IRF9-210ENST00000560542 PXDNQ92626 1479 aa21.65■■□□□ 1.06
IRF9-210ENST00000560542 EP400Q96L91 3159 aa21.65■■□□□ 1.06
IRF9-210ENST00000560542 MARF1Q9Y4F3 1742 aaKnown RBP21.65■■□□□ 1.06
IRF9-210ENST00000560542 LRPPRCP42704 1394 aaKnown RBP21.63■■□□□ 1.05
IRF9-210ENST00000560542 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.63■■□□□ 1.05
IRF9-210ENST00000560542 GJD4Q96KN9 370 aaPredicted RBP21.61■■□□□ 1.05
IRF9-210ENST00000560542 ESCO1Q5FWF5 840 aa21.6■■□□□ 1.05
IRF9-210ENST00000560542 PPLO60437 1756 aa21.59■■□□□ 1.05
IRF9-210ENST00000560542 BLMP54132 1417 aaPredicted RBP21.58■■□□□ 1.05
IRF9-210ENST00000560542 TECPR2O15040 1411 aa21.57■■□□□ 1.04
IRF9-210ENST00000560542 NAIPQ13075 1403 aa21.57■■□□□ 1.04
IRF9-210ENST00000560542 SLIT2O94813 1529 aa21.55■■□□□ 1.04
IRF9-210ENST00000560542 FOXO3O43524 673 aa21.55■■□□□ 1.04
IRF9-210ENST00000560542 UNC5CLQ8IV45 518 aa21.55■■□□□ 1.04
IRF9-210ENST00000560542 RALGAPBQ86X10 1494 aa21.54■■□□□ 1.04
IRF9-210ENST00000560542 GLI3P10071 1580 aa21.53■■□□□ 1.04
IRF9-210ENST00000560542 KIF1AQ12756 1690 aa21.52■■□□□ 1.04
IRF9-210ENST00000560542 CCDC144AA2RUR9 1427 aa21.52■■□□□ 1.04
IRF9-210ENST00000560542 RRBP1Q9P2E9 1410 aaKnown RBP21.51■■□□□ 1.03
IRF9-210ENST00000560542 USP32Q8NFA0 1604 aa21.5■■□□□ 1.03
IRF9-210ENST00000560542 SPATA31A3Q5VYP0 1347 aa21.5■■□□□ 1.03
IRF9-210ENST00000560542 KNDC1Q76NI1 1749 aa21.49■■□□□ 1.03
IRF9-210ENST00000560542 XPCQ01831 940 aaPredicted RBP21.49■■□□□ 1.03
IRF9-210ENST00000560542 ABCC11Q96J66 1382 aa21.48■■□□□ 1.03
IRF9-210ENST00000560542 FMN2Q9NZ56 1722 aa21.47■■□□□ 1.03
IRF9-210ENST00000560542 SF3B2Q13435 895 aaKnown RBP21.47■■□□□ 1.03
IRF9-210ENST00000560542 SLC4A1APQ9BWU0 796 aaKnown RBP21.47■■□□□ 1.03
IRF9-210ENST00000560542 LRP5O75197 1615 aa21.47■■□□□ 1.03
IRF9-210ENST00000560542 ANKRD30BQ9BXX2 1392 aa21.47■■□□□ 1.03
IRF9-210ENST00000560542 NWD2Q9ULI1 1742 aa21.44■■□□□ 1.02
IRF9-210ENST00000560542 VPS72Q15906 364 aa21.44■■□□□ 1.02
IRF9-210ENST00000560542 BRWD3Q6RI45 1802 aa21.43■■□□□ 1.02
IRF9-210ENST00000560542 WAPLQ7Z5K2 1190 aa21.43■■□□□ 1.02
IRF9-210ENST00000560542 ADGRF5Q8IZF2 1346 aa21.43■■□□□ 1.02
IRF9-210ENST00000560542 TNS3Q68CZ2 1445 aa21.43■■□□□ 1.02
IRF9-210ENST00000560542 ONECUT3O60422 494 aaPredicted RBP21.42■■□□□ 1.02
IRF9-210ENST00000560542 IFT172Q9UG01 1749 aa21.41■■□□□ 1.02
IRF9-210ENST00000560542 PIK3C2GO75747 1445 aa21.41■■□□□ 1.02
IRF9-210ENST00000560542 SPATA31E1Q6ZUB1 1445 aa21.41■■□□□ 1.02
IRF9-210ENST00000560542 NUTM2FA1L443 756 aa21.41■■□□□ 1.02
IRF9-210ENST00000560542 SEPT12Q8IYM1 358 aa21.41■■□□□ 1.02
IRF9-210ENST00000560542 SIRT1Q96EB6 747 aa21.41■■□□□ 1.02
IRF9-210ENST00000560542 STK26Q9P289 416 aa21.41■■□□□ 1.02
IRF9-210ENST00000560542 PSME1Q06323 249 aa21.4■■□□□ 1.02
IRF9-210ENST00000560542 KRT28Q7Z3Y7 464 aa21.4■■□□□ 1.02
IRF9-210ENST00000560542 DEFB132Q7Z7B7 95 aa21.4■■□□□ 1.02
IRF9-210ENST00000560542 PLEKHH1Q9ULM0 1364 aa21.39■■□□□ 1.02
IRF9-210ENST00000560542 HAP1P54257 671 aaPredicted RBP21.39■■□□□ 1.01
IRF9-210ENST00000560542 PLCH1Q4KWH8 1693 aa21.39■■□□□ 1.01
IRF9-210ENST00000560542 YTHDC2Q9H6S0 1430 aaKnown RBP21.38■■□□□ 1.01
IRF9-210ENST00000560542 SBNO1A3KN83 1393 aa21.38■■□□□ 1.01
IRF9-210ENST00000560542 ARHGEF10O15013 1369 aa21.38■■□□□ 1.01
IRF9-210ENST00000560542 KRT27Q7Z3Y8 459 aa21.37■■□□□ 1.01
IRF9-210ENST00000560542 PPARGC1BQ86YN6 1023 aaKnown RBP21.37■■□□□ 1.01
IRF9-210ENST00000560542 ABCA3Q99758 1704 aa21.36■■□□□ 1.01
IRF9-210ENST00000560542 PHF8Q9UPP1 1060 aa21.36■■□□□ 1.01
IRF9-210ENST00000560542 NRXN1Q9ULB1 1477 aa21.36■■□□□ 1.01
IRF9-210ENST00000560542 TMEM132EQ6IEE7 984 aa21.34■■□□□ 1.01
IRF9-210ENST00000560542 BAG6P46379 1132 aa21.33■■□□□ 1.01
IRF9-210ENST00000560542 CCDC9Q9Y3X0 531 aaKnown RBP21.33■■□□□ 1.01
IRF9-210ENST00000560542 RGL3Q3MIN7 710 aa21.32■■□□□ 1
IRF9-210ENST00000560542 ANKARQ7Z5J8 1434 aa21.3■■□□□ 1
IRF9-210ENST00000560542 CABLES1Q8TDN4 633 aa21.3■■□□□ 1
IRF9-210ENST00000560542 RGPD8O14715 1765 aaPredicted RBP21.3■■□□□ 1
IRF9-210ENST00000560542 NRAPQ86VF7 1730 aa21.29■■□□□ 1
IRF9-210ENST00000560542 C14orf93Q9H972 538 aaKnown RBP21.28■■□□□ 1
IRF9-210ENST00000560542 DHX57Q6P158 1386 aaKnown RBP21.27■■□□□ 1
IRF9-210ENST00000560542 HRCP23327 699 aa21.27■■□□□ 1
IRF9-210ENST00000560542 RGPD1P0DJD0 1748 aa21.26■□□□□ 0.99
IRF9-210ENST00000560542 FAM83GA6ND36 823 aa21.26■□□□□ 0.99
IRF9-210ENST00000560542 DISP2A7MBM2 1401 aa21.26■□□□□ 0.99
IRF9-210ENST00000560542 ADGRB2O60241 1585 aa21.26■□□□□ 0.99
IRF9-210ENST00000560542 DLC1Q96QB1 1528 aa21.25■□□□□ 0.99
IRF9-210ENST00000560542 A0A0G2JS52 829 aa21.25■□□□□ 0.99
IRF9-210ENST00000560542 MYT1Q01538 1121 aa21.25■□□□□ 0.99
IRF9-210ENST00000560542 LMOD2Q6P5Q4 547 aa21.25■□□□□ 0.99
IRF9-210ENST00000560542 COL14A1Q05707 1796 aaKnown RBP21.25■□□□□ 0.99
IRF9-210ENST00000560542 PSDA5PKW4 1024 aaPredicted RBP21.23■□□□□ 0.99
IRF9-210ENST00000560542 MPHOSPH9Q99550 1183 aa21.23■□□□□ 0.99
IRF9-210ENST00000560542 EIF3AQ14152 1382 aaKnown RBP21.23■□□□□ 0.99
IRF9-210ENST00000560542 TRPM3Q9HCF6 1732 aaPredicted RBP21.22■□□□□ 0.99
IRF9-210ENST00000560542 FAM98CQ17RN3 349 aaKnown RBP21.22■□□□□ 0.99
IRF9-210ENST00000560542 PRAM1Q96QH2 718 aa21.22■□□□□ 0.99
IRF9-210ENST00000560542 BTG4Q9NY30 223 aa21.21■□□□□ 0.99
IRF9-210ENST00000560542 ACIN1Q9UKV3 1341 aaKnown RBP21.21■□□□□ 0.99
IRF9-210ENST00000560542 ALS2Q96Q42 1657 aa21.21■□□□□ 0.99
IRF9-210ENST00000560542 THSD7AQ9UPZ6 1657 aa21.2■□□□□ 0.98
IRF9-210ENST00000560542 GPRASP1Q5JY77 1395 aa21.2■□□□□ 0.98
IRF9-210ENST00000560542 SPATA31A5Q5VU36 1347 aa21.19■□□□□ 0.98
IRF9-210ENST00000560542 SPATA31A7Q8IWB4 1347 aa21.19■□□□□ 0.98
IRF9-210ENST00000560542 PLEKHG5O94827 1062 aa21.18■□□□□ 0.98
IRF9-210ENST00000560542 CFAP70Q5T0N1 1121 aa21.18■□□□□ 0.98
IRF9-210ENST00000560542 EN1Q05925 392 aaPredicted RBP21.17■□□□□ 0.98
IRF9-210ENST00000560542 PMFBP1Q8TBY8 1022 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms