RNA–Protein interactions for RNA: ENST00000560542.1

IRF9-210, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-210ENST00000560542 NISCHQ9Y2I1 1504 aa36.38■■■■□ 3.41
IRF9-210ENST00000560542 ABCC9O60706 1549 aa33.17■■■□□ 2.9
IRF9-210ENST00000560542 CCDC180Q9P1Z9 1646 aa32.91■■■□□ 2.86
IRF9-210ENST00000560542 RB1CC1Q8TDY2 1594 aa31.51■■■□□ 2.63
IRF9-210ENST00000560542 DNAJC5BQ9UF47 199 aa31.45■■■□□ 2.63
IRF9-210ENST00000560542 NACADO15069 1562 aa31.21■■■□□ 2.59
IRF9-210ENST00000560542 PABPN1Q86U42 306 aaKnown RBP eCLIP30.76■■■□□ 2.51
IRF9-210ENST00000560542 DCAF8L2P0C7V8 631 aa30.71■■■□□ 2.51
IRF9-210ENST00000560542 MYO15BQ96JP2 1530 aa30.71■■■□□ 2.51
IRF9-210ENST00000560542 UNC13AQ9UPW8 1703 aa30.7■■■□□ 2.5
IRF9-210ENST00000560542 BICRAQ9NZM4 1560 aa30.54■■■□□ 2.48
IRF9-210ENST00000560542 SHROOM4Q9ULL8 1493 aa30.28■■■□□ 2.44
IRF9-210ENST00000560542 DCAF1Q9Y4B6 1507 aa30.12■■■□□ 2.41
IRF9-210ENST00000560542 ZCCHC6Q5VYS8 1495 aaKnown RBP30.07■■■□□ 2.4
IRF9-210ENST00000560542 CC2D2AQ9P2K1 1620 aa30■■■□□ 2.39
IRF9-210ENST00000560542 CECR2Q9BXF3 1484 aa29.99■■■□□ 2.39
IRF9-210ENST00000560542 EIF4G1Q04637 1599 aaKnown RBP29.85■■■□□ 2.37
IRF9-210ENST00000560542 SCRIBQ14160 1630 aa29.82■■■□□ 2.36
IRF9-210ENST00000560542 DNAJC5Q9H3Z4 198 aa29.3■■■□□ 2.28
IRF9-210ENST00000560542 CUX2O14529 1486 aa28.91■■■□□ 2.22
IRF9-210ENST00000560542 NCAPD3P42695 1498 aa28.79■■■□□ 2.2
IRF9-210ENST00000560542 ERCC6Q03468 1493 aa28.73■■■□□ 2.19
IRF9-210ENST00000560542 ATAD2BQ9ULI0 1458 aa28.6■■■□□ 2.17
IRF9-210ENST00000560542 HMGXB3Q12766 1538 aa28.57■■■□□ 2.16
IRF9-210ENST00000560542 SMARCA2P51531 1590 aa28.56■■■□□ 2.16
IRF9-210ENST00000560542 SMARCA4P51532 1647 aa28.47■■■□□ 2.15
IRF9-210ENST00000560542 NESP48681 1621 aa28.36■■■□□ 2.13
IRF9-210ENST00000560542 BAZ1AQ9NRL2 1556 aaPredicted RBP28.3■■■□□ 2.12
IRF9-210ENST00000560542 BAZ1BQ9UIG0 1483 aaKnown RBP28.3■■■□□ 2.12
IRF9-210ENST00000560542 PEG3Q9GZU2 1588 aa28.27■■■□□ 2.12
IRF9-210ENST00000560542 THOC2Q8NI27 1593 aaKnown RBP28.24■■■□□ 2.11
IRF9-210ENST00000560542 LAMC3Q9Y6N6 1575 aa28.22■■■□□ 2.11
IRF9-210ENST00000560542 PDS5BQ9NTI5 1447 aa28.07■■■□□ 2.08
IRF9-210ENST00000560542 KIF21AQ7Z4S6 1674 aa28.01■■■□□ 2.07
IRF9-210ENST00000560542 MROH2BQ7Z745 1585 aa27.97■■■□□ 2.07
IRF9-210ENST00000560542 CADPSQ9ULU8 1353 aa27.87■■■□□ 2.05
IRF9-210ENST00000560542 MRC2Q9UBG0 1479 aa27.83■■■□□ 2.05
IRF9-210ENST00000560542 WDR62O43379 1518 aa27.8■■■□□ 2.04
IRF9-210ENST00000560542 TRIM41Q8WV44 630 aa27.72■■■□□ 2.03
IRF9-210ENST00000560542 CEP164Q9UPV0 1460 aa27.64■■■□□ 2.01
IRF9-210ENST00000560542 WIZO95785 1651 aa27.59■■■□□ 2.01
IRF9-210ENST00000560542 FANCD2Q9BXW9 1451 aa27.54■■■□□ 2
IRF9-210ENST00000560542 CFTRP13569 1480 aa27.48■■□□□ 1.99
IRF9-210ENST00000560542 OSCARQ8IYS5 282 aa27.44■■□□□ 1.98
IRF9-210ENST00000560542 URB2Q14146 1524 aaKnown RBP27.31■■□□□ 1.96
IRF9-210ENST00000560542 TOP2AP11388 1531 aaKnown RBP27.3■■□□□ 1.96
IRF9-210ENST00000560542 RSF1Q96T23 1441 aaPredicted RBP27.25■■□□□ 1.95
IRF9-210ENST00000560542 PRDM2Q13029 1718 aa27.17■■□□□ 1.94
IRF9-210ENST00000560542 IFT140Q96RY7 1462 aa27.12■■□□□ 1.93
IRF9-210ENST00000560542 RIMBP3CA6NJZ7 1639 aa27.12■■□□□ 1.93
IRF9-210ENST00000560542 RIMBP3BA6NNM3 1639 aa27.12■■□□□ 1.93
IRF9-210ENST00000560542 RIMBP3Q9UFD9 1639 aa27.12■■□□□ 1.93
IRF9-210ENST00000560542 ZNF608Q9ULD9 1512 aaPredicted RBP27.02■■□□□ 1.92
IRF9-210ENST00000560542 ARHGEF11O15085 1522 aa27.01■■□□□ 1.91
IRF9-210ENST00000560542 ABCC8Q09428 1581 aa26.97■■□□□ 1.91
IRF9-210ENST00000560542 TOPBP1Q92547 1522 aa26.96■■□□□ 1.91
IRF9-210ENST00000560542 CCDC88BA6NC98 1476 aa26.93■■□□□ 1.9
IRF9-210ENST00000560542 EIF4G3O43432 1585 aaKnown RBP26.9■■□□□ 1.9
IRF9-210ENST00000560542 DNMBPQ6XZF7 1577 aa26.86■■□□□ 1.89
IRF9-210ENST00000560542 TARBP1Q13395 1621 aaKnown RBP26.77■■□□□ 1.88
IRF9-210ENST00000560542 CYB5RLQ6IPT4 315 aa26.76■■□□□ 1.87
IRF9-210ENST00000560542 CHD1O14646 1710 aa26.74■■□□□ 1.87
IRF9-210ENST00000560542 AQRO60306 1485 aaKnown RBP eCLIP26.72■■□□□ 1.874e-7■■■■■ 33.8
IRF9-210ENST00000560542 ARAP1Q96P48 1450 aa26.7■■□□□ 1.87
IRF9-210ENST00000560542 POLA1P09884 1462 aaPredicted RBP26.67■■□□□ 1.86
IRF9-210ENST00000560542 TRHP20396 242 aaPredicted RBP26.59■■□□□ 1.85
IRF9-210ENST00000560542 FBLN2P98095 1184 aa26.59■■□□□ 1.85
IRF9-210ENST00000560542 WDR97A6NE52 1622 aa26.58■■□□□ 1.85
IRF9-210ENST00000560542 SOGA1O94964 1423 aa26.52■■□□□ 1.84
IRF9-210ENST00000560542 RAD54L2Q9Y4B4 1467 aa26.5■■□□□ 1.83
IRF9-210ENST00000560542 CLASP1Q7Z460 1538 aa26.49■■□□□ 1.83
IRF9-210ENST00000560542 TDRD9Q8NDG6 1382 aaKnown RBP26.47■■□□□ 1.83
IRF9-210ENST00000560542 SNAPC4Q5SXM2 1469 aa26.47■■□□□ 1.83
IRF9-210ENST00000560542 MAGI1Q96QZ7 1491 aaPredicted RBP26.46■■□□□ 1.83
IRF9-210ENST00000560542 SYNJ1O43426 1573 aa26.46■■□□□ 1.83
IRF9-210ENST00000560542 FGD5Q6ZNL6 1462 aa26.42■■□□□ 1.82
IRF9-210ENST00000560542 CHMP7Q8WUX9 453 aaPredicted RBP26.39■■□□□ 1.82
IRF9-210ENST00000560542 GRIN2BQ13224 1484 aa26.38■■□□□ 1.81
IRF9-210ENST00000560542 SYNJ2O15056 1496 aa26.36■■□□□ 1.81
IRF9-210ENST00000560542 CUX1P39880 1505 aa26.32■■□□□ 1.8
IRF9-210ENST00000560542 GAPVD1Q14C86 1478 aa26.21■■□□□ 1.79
IRF9-210ENST00000560542 PBRM1Q86U86 1689 aa26.21■■□□□ 1.79
IRF9-210ENST00000560542 AEBP2Q6ZN18 517 aaPredicted RBP26.17■■□□□ 1.78
IRF9-210ENST00000560542 ABCA10Q8WWZ4 1543 aa26.15■■□□□ 1.78
IRF9-210ENST00000560542 ABCA5Q8WWZ7 1642 aa26.14■■□□□ 1.77
IRF9-210ENST00000560542 GRIN2AQ12879 1464 aa26.03■■□□□ 1.76
IRF9-210ENST00000560542 NUP160Q12769 1436 aa25.98■■□□□ 1.75
IRF9-210ENST00000560542 ADAMTS12P58397 1594 aa25.96■■□□□ 1.75
IRF9-210ENST00000560542 WRNQ14191 1432 aaPredicted RBP eCLIP25.95■■□□□ 1.74
IRF9-210ENST00000560542 CEP170Q5SW79 1584 aa25.95■■□□□ 1.74
IRF9-210ENST00000560542 ERCC6L2Q5T890 1561 aa25.95■■□□□ 1.74
IRF9-210ENST00000560542 SHROOM2Q13796 1616 aa25.92■■□□□ 1.74
IRF9-210ENST00000560542 FHAD1B1AJZ9 1412 aa25.88■■□□□ 1.73
IRF9-210ENST00000560542 ERICH3Q5RHP9 1530 aa25.83■■□□□ 1.72
IRF9-210ENST00000560542 TOP2BQ02880 1626 aa25.82■■□□□ 1.72
IRF9-210ENST00000560542 BIVM-ERCC5R4GMW8 1640 aa25.82■■□□□ 1.72
IRF9-210ENST00000560542 KIF13AQ9H1H9 1805 aa25.74■■□□□ 1.71
IRF9-210ENST00000560542 PRG4Q92954 1404 aaPredicted RBP25.71■■□□□ 1.71
IRF9-210ENST00000560542 JPH4Q96JJ6 628 aa25.65■■□□□ 1.7
IRF9-210ENST00000560542 ABCC10Q5T3U5 1492 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms