RNA–Protein interactions for RNA: ENST00000560460.5

RMDN3-208, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 5

Gene RMDN3, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-208ENST00000560460 CDC42BPGQ6DT37 1551 aa29.03■■■□□ 2.24
RMDN3-208ENST00000560460 CDK12Q9NYV4 1490 aaPredicted RBP29■■■□□ 2.23
RMDN3-208ENST00000560460 ESCO1Q5FWF5 840 aa29■■■□□ 2.23
RMDN3-208ENST00000560460 WAPLQ7Z5K2 1190 aa28.99■■■□□ 2.23
RMDN3-208ENST00000560460 LRPPRCP42704 1394 aaKnown RBP28.99■■■□□ 2.23
RMDN3-208ENST00000560460 TMEM132EQ6IEE7 984 aa28.98■■■□□ 2.23
RMDN3-208ENST00000560460 UPF1Q92900 1129 aaKnown RBP eCLIP28.98■■■□□ 2.23
RMDN3-208ENST00000560460 NGLY1Q96IV0 654 aa28.98■■■□□ 2.23
RMDN3-208ENST00000560460 QTRT2Q9H974 415 aaKnown RBP28.98■■■□□ 2.23
RMDN3-208ENST00000560460 TECPR2O15040 1411 aa28.97■■■□□ 2.23
RMDN3-208ENST00000560460 PIK3C2GO75747 1445 aa28.97■■■□□ 2.23
RMDN3-208ENST00000560460 KNDC1Q76NI1 1749 aa28.96■■■□□ 2.23
RMDN3-208ENST00000560460 NPHP3Q7Z494 1330 aa28.95■■■□□ 2.23
RMDN3-208ENST00000560460 ABCC11Q96J66 1382 aa28.94■■■□□ 2.22
RMDN3-208ENST00000560460 NUTM2FA1L443 756 aa28.94■■■□□ 2.22
RMDN3-208ENST00000560460 RBM6P78332 1123 aaKnown RBP28.94■■■□□ 2.22
RMDN3-208ENST00000560460 ACIN1Q9UKV3 1341 aaKnown RBP28.93■■■□□ 2.22
RMDN3-208ENST00000560460 PLEKHH1Q9ULM0 1364 aa28.92■■■□□ 2.22
RMDN3-208ENST00000560460 COL22A1Q8NFW1 1626 aaPredicted RBP28.91■■■□□ 2.22
RMDN3-208ENST00000560460 XPCQ01831 940 aaPredicted RBP28.91■■■□□ 2.22
RMDN3-208ENST00000560460 RGS12O14924 1447 aa28.91■■■□□ 2.22
RMDN3-208ENST00000560460 YTHDC2Q9H6S0 1430 aaKnown RBP28.91■■■□□ 2.22
RMDN3-208ENST00000560460 FOXO3O43524 673 aa28.9■■■□□ 2.22
RMDN3-208ENST00000560460 PXDNQ92626 1479 aa28.9■■■□□ 2.22
RMDN3-208ENST00000560460 USP21Q9UK80 565 aa28.88■■■□□ 2.21
RMDN3-208ENST00000560460 FMN2Q9NZ56 1722 aa28.86■■■□□ 2.21
RMDN3-208ENST00000560460 RAB3GAP2Q9H2M9 1393 aa28.85■■■□□ 2.21
RMDN3-208ENST00000560460 MYOM2P54296 1465 aa28.85■■■□□ 2.21
RMDN3-208ENST00000560460 C14orf93Q9H972 538 aaKnown RBP28.84■■■□□ 2.21
RMDN3-208ENST00000560460 NRXN1Q9ULB1 1477 aa28.83■■■□□ 2.21
RMDN3-208ENST00000560460 CFAP70Q5T0N1 1121 aa28.82■■■□□ 2.2
RMDN3-208ENST00000560460 FNBP4Q8N3X1 1017 aaPredicted RBP28.82■■■□□ 2.2
RMDN3-208ENST00000560460 TRPC5Q9UL62 973 aaPredicted RBP28.82■■■□□ 2.2
RMDN3-208ENST00000560460 DHX57Q6P158 1386 aaKnown RBP28.81■■■□□ 2.2
RMDN3-208ENST00000560460 KIF1AQ12756 1690 aa28.8■■■□□ 2.2
RMDN3-208ENST00000560460 SIRT1Q96EB6 747 aa28.79■■■□□ 2.2
RMDN3-208ENST00000560460 MARF1Q9Y4F3 1742 aaKnown RBP28.79■■■□□ 2.2
RMDN3-208ENST00000560460 SAFB2Q14151 953 aaKnown RBP eCLIP28.77■■■□□ 2.2
RMDN3-208ENST00000560460 ATRNO75882 1429 aa28.77■■■□□ 2.2
RMDN3-208ENST00000560460 RGPD8O14715 1765 aaPredicted RBP28.76■■■□□ 2.19
RMDN3-208ENST00000560460 PRAM1Q96QH2 718 aa28.75■■■□□ 2.19
RMDN3-208ENST00000560460 SPATA31A3Q5VYP0 1347 aa28.73■■■□□ 2.19
RMDN3-208ENST00000560460 KRT28Q7Z3Y7 464 aa28.73■■■□□ 2.19
RMDN3-208ENST00000560460 POGKQ9P215 609 aa28.71■■■□□ 2.19
RMDN3-208ENST00000560460 PHF8Q9UPP1 1060 aa28.71■■■□□ 2.19
RMDN3-208ENST00000560460 ATAD2Q6PL18 1390 aa28.71■■■□□ 2.19
RMDN3-208ENST00000560460 BCL9LQ86UU0 1499 aa28.71■■■□□ 2.19
RMDN3-208ENST00000560460 DLC1Q96QB1 1528 aa28.68■■■□□ 2.18
RMDN3-208ENST00000560460 EP400Q96L91 3159 aa28.66■■■□□ 2.18
RMDN3-208ENST00000560460 PSME1Q06323 249 aa28.66■■■□□ 2.18
RMDN3-208ENST00000560460 KDM2AQ9Y2K7 1162 aa28.66■■■□□ 2.18
RMDN3-208ENST00000560460 TNS3Q68CZ2 1445 aa28.66■■■□□ 2.18
RMDN3-208ENST00000560460 PLEKHG5O94827 1062 aa28.65■■■□□ 2.18
RMDN3-208ENST00000560460 HAP1P54257 671 aaPredicted RBP28.65■■■□□ 2.18
RMDN3-208ENST00000560460 USP32Q8NFA0 1604 aa28.65■■■□□ 2.18
RMDN3-208ENST00000560460 ADGRB1O14514 1584 aa28.64■■■□□ 2.18
RMDN3-208ENST00000560460 TRAK1Q9UPV9 953 aa28.64■■■□□ 2.18
RMDN3-208ENST00000560460 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.63■■■□□ 2.17
RMDN3-208ENST00000560460 DCAF11Q8TEB1 546 aa28.63■■■□□ 2.17
RMDN3-208ENST00000560460 GJD4Q96KN9 370 aaPredicted RBP28.63■■■□□ 2.17
RMDN3-208ENST00000560460 LMOD2Q6P5Q4 547 aa28.62■■■□□ 2.17
RMDN3-208ENST00000560460 UNC5CLQ8IV45 518 aa28.61■■■□□ 2.17
RMDN3-208ENST00000560460 PMFBP1Q8TBY8 1022 aa28.61■■■□□ 2.17
RMDN3-208ENST00000560460 HIRIP3Q9BW71 556 aaPredicted RBP28.61■■■□□ 2.17
RMDN3-208ENST00000560460 ADGRB2O60241 1585 aa28.61■■■□□ 2.17
RMDN3-208ENST00000560460 ANKARQ7Z5J8 1434 aa28.6■■■□□ 2.17
RMDN3-208ENST00000560460 SLIT2O94813 1529 aa28.6■■■□□ 2.17
RMDN3-208ENST00000560460 CABLES1Q8TDN4 633 aa28.6■■■□□ 2.17
RMDN3-208ENST00000560460 SBNO1A3KN83 1393 aa28.59■■■□□ 2.17
RMDN3-208ENST00000560460 MINK1Q8N4C8 1332 aaPredicted RBP28.58■■■□□ 2.17
RMDN3-208ENST00000560460 TRIM26Q12899 539 aaPredicted RBP28.57■■■□□ 2.16
RMDN3-208ENST00000560460 ARHGEF10O15013 1369 aa28.56■■■□□ 2.16
RMDN3-208ENST00000560460 RALGAPBQ86X10 1494 aa28.56■■■□□ 2.16
RMDN3-208ENST00000560460 ABCA3Q99758 1704 aa28.55■■■□□ 2.16
RMDN3-208ENST00000560460 GLI3P10071 1580 aa28.54■■■□□ 2.16
RMDN3-208ENST00000560460 EIF3AQ14152 1382 aaKnown RBP28.53■■■□□ 2.16
RMDN3-208ENST00000560460 PLCH1Q4KWH8 1693 aa28.53■■■□□ 2.16
RMDN3-208ENST00000560460 HRCP23327 699 aa28.52■■■□□ 2.16
RMDN3-208ENST00000560460 STAC3Q96MF2 364 aa28.51■■■□□ 2.15
RMDN3-208ENST00000560460 SRCAPQ6ZRS2 3230 aa28.5■■■□□ 2.15
RMDN3-208ENST00000560460 TULP4Q9NRJ4 1543 aa28.5■■■□□ 2.15
RMDN3-208ENST00000560460 GPRASP1Q5JY77 1395 aa28.5■■■□□ 2.15
RMDN3-208ENST00000560460 NWD2Q9ULI1 1742 aa28.49■■■□□ 2.15
RMDN3-208ENST00000560460 PRR36Q9H6K5 1346 aa28.49■■■□□ 2.15
RMDN3-208ENST00000560460 WASLO00401 505 aaPredicted RBP28.49■■■□□ 2.15
RMDN3-208ENST00000560460 CCDC9Q9Y3X0 531 aaKnown RBP28.49■■■□□ 2.15
RMDN3-208ENST00000560460 TRPM3Q9HCF6 1732 aaPredicted RBP28.49■■■□□ 2.15
RMDN3-208ENST00000560460 ARHGEF28Q8N1W1 1705 aaKnown RBP28.46■■■□□ 2.15
RMDN3-208ENST00000560460 VPS72Q15906 364 aa28.46■■■□□ 2.15
RMDN3-208ENST00000560460 BRWD3Q6RI45 1802 aa28.46■■■□□ 2.15
RMDN3-208ENST00000560460 CCDC125Q86Z20 511 aa28.45■■■□□ 2.14
RMDN3-208ENST00000560460 ALS2Q96Q42 1657 aa28.45■■■□□ 2.14
RMDN3-208ENST00000560460 NGDNQ8NEJ9 315 aaKnown RBP28.44■■■□□ 2.14
RMDN3-208ENST00000560460 FAM83GA6ND36 823 aa28.43■■■□□ 2.14
RMDN3-208ENST00000560460 SEPT12Q8IYM1 358 aa28.43■■■□□ 2.14
RMDN3-208ENST00000560460 PAK3O75914 559 aaPredicted RBP28.41■■■□□ 2.14
RMDN3-208ENST00000560460 ZRANB1Q9UGI0 708 aa28.4■■■□□ 2.14
RMDN3-208ENST00000560460 ITSN1Q15811 1721 aa28.4■■■□□ 2.14
RMDN3-208ENST00000560460 BLMP54132 1417 aaPredicted RBP28.37■■■□□ 2.13
RMDN3-208ENST00000560460 A0A0G2JS52 829 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms