RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 AFF2P51816 1311 aa8.94□□□□□ -0.98
PRKCH-220ENST00000556164 NUP155O75694 1391 aa8.94□□□□□ -0.98
PRKCH-220ENST00000556164 ROCK1Q13464 1354 aa8.94□□□□□ -0.98
PRKCH-220ENST00000556164 CDK12Q9NYV4 1490 aaPredicted RBP8.94□□□□□ -0.98
PRKCH-220ENST00000556164 NALCNQ8IZF0 1738 aa8.94□□□□□ -0.98
PRKCH-220ENST00000556164 PAXIP1Q6ZW49 1069 aaPredicted RBP8.93□□□□□ -0.98
PRKCH-220ENST00000556164 MST1RQ04912 1400 aa8.93□□□□□ -0.98
PRKCH-220ENST00000556164 SETD5Q9C0A6 1442 aa8.93□□□□□ -0.98
PRKCH-220ENST00000556164 KIF1BO60333 1816 aa8.92□□□□□ -0.98
PRKCH-220ENST00000556164 TMEM132AQ24JP5 1023 aa8.92□□□□□ -0.98
PRKCH-220ENST00000556164 ZNF326Q5BKZ1 582 aaKnown RBP8.92□□□□□ -0.98
PRKCH-220ENST00000556164 PROM2Q8N271 834 aa8.92□□□□□ -0.98
PRKCH-220ENST00000556164 METP08581 1390 aa8.91□□□□□ -0.98
PRKCH-220ENST00000556164 ITGAEP38570 1179 aa8.91□□□□□ -0.98
PRKCH-220ENST00000556164 IFNLR1Q8IU57 520 aaPredicted RBP8.91□□□□□ -0.98
PRKCH-220ENST00000556164 C8orf37Q96NL8 207 aa8.91□□□□□ -0.98
PRKCH-220ENST00000556164 CLTCL1P53675 1640 aa8.91□□□□□ -0.98
PRKCH-220ENST00000556164 RGS12O14924 1447 aa8.9□□□□□ -0.98
PRKCH-220ENST00000556164 ADGRL3Q9HAR2 1447 aa8.9□□□□□ -0.98
PRKCH-220ENST00000556164 PNPLA6Q8IY17 1366 aa8.9□□□□□ -0.98
PRKCH-220ENST00000556164 NBR1Q14596 966 aa8.9□□□□□ -0.98
PRKCH-220ENST00000556164 DDX17Q92841 729 aaKnown RBP8.9□□□□□ -0.98
PRKCH-220ENST00000556164 LRRC59Q96AG4 307 aaKnown RBP8.9□□□□□ -0.98
PRKCH-220ENST00000556164 NEXMIFQ5QGS0 1516 aa8.9□□□□□ -0.99
PRKCH-220ENST00000556164 QTRT2Q9H974 415 aaKnown RBP8.89□□□□□ -0.99
PRKCH-220ENST00000556164 ADAMTS2O95450 1211 aa8.88□□□□□ -0.99
PRKCH-220ENST00000556164 RBM6P78332 1123 aaKnown RBP8.88□□□□□ -0.99
PRKCH-220ENST00000556164 CFAP44Q96MT7 982 aa8.88□□□□□ -0.99
PRKCH-220ENST00000556164 LAMC1P11047 1609 aa8.87□□□□□ -0.99
PRKCH-220ENST00000556164 NGLY1Q96IV0 654 aa8.87□□□□□ -0.99
PRKCH-220ENST00000556164 C1orf167Q5SNV9 1468 aa8.87□□□□□ -0.99
PRKCH-220ENST00000556164 ATF5Q9Y2D1 282 aaPredicted RBP8.86□□□□□ -0.99
PRKCH-220ENST00000556164 MARF1Q9Y4F3 1742 aaKnown RBP8.85□□□□□ -0.99
PRKCH-220ENST00000556164 SPRYD3Q8NCJ5 442 aa8.85□□□□□ -0.99
PRKCH-220ENST00000556164 PTCH1Q13635 1447 aa8.85□□□□□ -0.99
PRKCH-220ENST00000556164 ATAD2Q6PL18 1390 aa8.85□□□□□ -0.99
PRKCH-220ENST00000556164 PPLO60437 1756 aa8.84□□□□□ -0.99
PRKCH-220ENST00000556164 PPARGC1BQ86YN6 1023 aaKnown RBP8.84□□□□□ -0.99
PRKCH-220ENST00000556164 USP21Q9UK80 565 aa8.84□□□□□ -0.99
PRKCH-220ENST00000556164 ROBO2Q9HCK4 1378 aa8.84□□□□□ -0.99
PRKCH-220ENST00000556164 COL22A1Q8NFW1 1626 aaPredicted RBP8.83□□□□□ -1
PRKCH-220ENST00000556164 SPDYE4A6NLX3 237 aa8.83□□□□□ -1
PRKCH-220ENST00000556164 CACNB1Q02641 598 aaPredicted RBP8.83□□□□□ -1
PRKCH-220ENST00000556164 ORAI2Q96SN7 254 aa8.83□□□□□ -1
PRKCH-220ENST00000556164 TRPC5Q9UL62 973 aaPredicted RBP8.83□□□□□ -1
PRKCH-220ENST00000556164 SOS2Q07890 1332 aaPredicted RBP8.82□□□□□ -1
PRKCH-220ENST00000556164 TSHZ2Q9NRE2 1034 aa8.82□□□□□ -1
PRKCH-220ENST00000556164 ATRNO75882 1429 aa8.81□□□□□ -1
PRKCH-220ENST00000556164 VGFO15240 615 aaPredicted RBP8.81□□□□□ -1
PRKCH-220ENST00000556164 CDC42BPGQ6DT37 1551 aa8.81□□□□□ -1
PRKCH-220ENST00000556164 HFM1A2PYH4 1435 aa8.8□□□□□ -1
PRKCH-220ENST00000556164 PRAG1Q86YV5 1406 aa8.8□□□□□ -1
PRKCH-220ENST00000556164 SAMD1Q6SPF0 538 aaPredicted RBP8.8□□□□□ -1
PRKCH-220ENST00000556164 FNBP4Q8N3X1 1017 aaPredicted RBP8.8□□□□□ -1
PRKCH-220ENST00000556164 MYOM2P54296 1465 aa8.8□□□□□ -1
PRKCH-220ENST00000556164 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.8□□□□□ -1
PRKCH-220ENST00000556164 NAIPQ13075 1403 aa8.8□□□□□ -1
PRKCH-220ENST00000556164 ESCO1Q5FWF5 840 aa8.79□□□□□ -1
PRKCH-220ENST00000556164 ZRANB1Q9UGI0 708 aa8.79□□□□□ -1
PRKCH-220ENST00000556164 RPGRIP1LQ68CZ1 1315 aa8.79□□□□□ -1
PRKCH-220ENST00000556164 NPHP3Q7Z494 1330 aa8.79□□□□□ -1
PRKCH-220ENST00000556164 PXDNQ92626 1479 aa8.78□□□□□ -1
PRKCH-220ENST00000556164 BRWD3Q6RI45 1802 aa8.78□□□□□ -1
PRKCH-220ENST00000556164 XPCQ01831 940 aaPredicted RBP8.78□□□□□ -1
PRKCH-220ENST00000556164 BCL9LQ86UU0 1499 aa8.77□□□□□ -1
PRKCH-220ENST00000556164 KNDC1Q76NI1 1749 aa8.77□□□□□ -1
PRKCH-220ENST00000556164 EP400Q96L91 3159 aa8.77□□□□□ -1.01
PRKCH-220ENST00000556164 FOXO3O43524 673 aa8.77□□□□□ -1.01
PRKCH-220ENST00000556164 FMN2Q9NZ56 1722 aa8.77□□□□□ -1.01
PRKCH-220ENST00000556164 IFT172Q9UG01 1749 aa8.77□□□□□ -1.01
PRKCH-220ENST00000556164 RGPD8O14715 1765 aaPredicted RBP8.76□□□□□ -1.01
PRKCH-220ENST00000556164 KIF1AQ12756 1690 aa8.76□□□□□ -1.01
PRKCH-220ENST00000556164 NUTM2FA1L443 756 aa8.76□□□□□ -1.01
PRKCH-220ENST00000556164 RRBP1Q9P2E9 1410 aaKnown RBP8.76□□□□□ -1.01
PRKCH-220ENST00000556164 USP32Q8NFA0 1604 aa8.76□□□□□ -1.01
PRKCH-220ENST00000556164 LRPPRCP42704 1394 aaKnown RBP8.75□□□□□ -1.01
PRKCH-220ENST00000556164 GLI3P10071 1580 aa8.75□□□□□ -1.01
PRKCH-220ENST00000556164 ECM2O94769 699 aaPredicted RBP8.75□□□□□ -1.01
PRKCH-220ENST00000556164 CCDC125Q86Z20 511 aa8.75□□□□□ -1.01
PRKCH-220ENST00000556164 GJD4Q96KN9 370 aaPredicted RBP8.75□□□□□ -1.01
PRKCH-220ENST00000556164 STK26Q9P289 416 aa8.75□□□□□ -1.01
PRKCH-220ENST00000556164 WAPLQ7Z5K2 1190 aa8.74□□□□□ -1.01
PRKCH-220ENST00000556164 RALGAPBQ86X10 1494 aa8.74□□□□□ -1.01
PRKCH-220ENST00000556164 PLCH1Q4KWH8 1693 aa8.74□□□□□ -1.01
PRKCH-220ENST00000556164 ADGRF5Q8IZF2 1346 aa8.74□□□□□ -1.01
PRKCH-220ENST00000556164 SRCAPQ6ZRS2 3230 aa8.74□□□□□ -1.01
PRKCH-220ENST00000556164 TECPR2O15040 1411 aa8.73□□□□□ -1.01
PRKCH-220ENST00000556164 UNC5CLQ8IV45 518 aa8.73□□□□□ -1.01
PRKCH-220ENST00000556164 ABCA3Q99758 1704 aa8.73□□□□□ -1.01
PRKCH-220ENST00000556164 NWD2Q9ULI1 1742 aa8.73□□□□□ -1.01
PRKCH-220ENST00000556164 SLIT2O94813 1529 aa8.73□□□□□ -1.01
PRKCH-220ENST00000556164 PLEKHH1Q9ULM0 1364 aa8.73□□□□□ -1.01
PRKCH-220ENST00000556164 CCDC144AA2RUR9 1427 aa8.72□□□□□ -1.01
PRKCH-220ENST00000556164 BLMP54132 1417 aaPredicted RBP8.72□□□□□ -1.01
PRKCH-220ENST00000556164 RGL3Q3MIN7 710 aa8.72□□□□□ -1.01
PRKCH-220ENST00000556164 SPATA31A3Q5VYP0 1347 aa8.72□□□□□ -1.01
PRKCH-220ENST00000556164 PLEKHG5O94827 1062 aa8.71□□□□□ -1.02
PRKCH-220ENST00000556164 SF3B2Q13435 895 aaKnown RBP8.71□□□□□ -1.02
PRKCH-220ENST00000556164 TMEM132EQ6IEE7 984 aa8.71□□□□□ -1.02
PRKCH-220ENST00000556164 ABCC11Q96J66 1382 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms