RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 FOXO3O43524 673 aa12.83□□□□□ -0.36
NEK9-206ENST00000555537 DEFB132Q7Z7B7 95 aa12.83□□□□□ -0.36
NEK9-206ENST00000555537 LAMC1P11047 1609 aa12.82□□□□□ -0.36
NEK9-206ENST00000555537 CLTCL1P53675 1640 aa12.81□□□□□ -0.36
NEK9-206ENST00000555537 EP400Q96L91 3159 aa12.81□□□□□ -0.36
NEK9-206ENST00000555537 VGFO15240 615 aaPredicted RBP12.8□□□□□ -0.36
NEK9-206ENST00000555537 MYOM2P54296 1465 aa12.79□□□□□ -0.36
NEK9-206ENST00000555537 PLEKHG5O94827 1062 aa12.79□□□□□ -0.36
NEK9-206ENST00000555537 NPHP3Q7Z494 1330 aa12.79□□□□□ -0.36
NEK9-206ENST00000555537 COL22A1Q8NFW1 1626 aaPredicted RBP12.78□□□□□ -0.36
NEK9-206ENST00000555537 WAPLQ7Z5K2 1190 aa12.78□□□□□ -0.36
NEK9-206ENST00000555537 UNC5CLQ8IV45 518 aa12.78□□□□□ -0.36
NEK9-206ENST00000555537 STK26Q9P289 416 aa12.77□□□□□ -0.37
NEK9-206ENST00000555537 PXDNQ92626 1479 aa12.77□□□□□ -0.37
NEK9-206ENST00000555537 SEPT12Q8IYM1 358 aa12.76□□□□□ -0.37
NEK9-206ENST00000555537 RALGAPBQ86X10 1494 aa12.76□□□□□ -0.37
NEK9-206ENST00000555537 HFM1A2PYH4 1435 aa12.75□□□□□ -0.37
NEK9-206ENST00000555537 KIF1BO60333 1816 aa12.75□□□□□ -0.37
NEK9-206ENST00000555537 BLMP54132 1417 aaPredicted RBP12.75□□□□□ -0.37
NEK9-206ENST00000555537 MARF1Q9Y4F3 1742 aaKnown RBP12.74□□□□□ -0.37
NEK9-206ENST00000555537 GLI3P10071 1580 aa12.74□□□□□ -0.37
NEK9-206ENST00000555537 PSDA5PKW4 1024 aaPredicted RBP12.74□□□□□ -0.37
NEK9-206ENST00000555537 SF3B2Q13435 895 aaKnown RBP12.74□□□□□ -0.37
NEK9-206ENST00000555537 CABLES1Q8TDN4 633 aa12.74□□□□□ -0.37
NEK9-206ENST00000555537 KRT28Q7Z3Y7 464 aa12.73□□□□□ -0.37
NEK9-206ENST00000555537 CCDC9Q9Y3X0 531 aaKnown RBP12.73□□□□□ -0.37
NEK9-206ENST00000555537 SLIT2O94813 1529 aa12.72□□□□□ -0.37
NEK9-206ENST00000555537 NAIPQ13075 1403 aa12.72□□□□□ -0.37
NEK9-206ENST00000555537 BRWD3Q6RI45 1802 aa12.72□□□□□ -0.37
NEK9-206ENST00000555537 SPATA31A3Q5VYP0 1347 aa12.72□□□□□ -0.37
NEK9-206ENST00000555537 RPGRIP1LQ68CZ1 1315 aa12.72□□□□□ -0.37
NEK9-206ENST00000555537 TMEM132EQ6IEE7 984 aa12.72□□□□□ -0.37
NEK9-206ENST00000555537 LRPPRCP42704 1394 aaKnown RBP12.71□□□□□ -0.37
NEK9-206ENST00000555537 PLEKHH1Q9ULM0 1364 aa12.71□□□□□ -0.37
NEK9-206ENST00000555537 ADGRF5Q8IZF2 1346 aa12.71□□□□□ -0.37
NEK9-206ENST00000555537 HAP1P54257 671 aaPredicted RBP12.71□□□□□ -0.37
NEK9-206ENST00000555537 RGL3Q3MIN7 710 aa12.7□□□□□ -0.38
NEK9-206ENST00000555537 KRT27Q7Z3Y8 459 aa12.7□□□□□ -0.38
NEK9-206ENST00000555537 PRAG1Q86YV5 1406 aa12.7□□□□□ -0.38
NEK9-206ENST00000555537 VPS72Q15906 364 aa12.69□□□□□ -0.38
NEK9-206ENST00000555537 LMOD2Q6P5Q4 547 aa12.69□□□□□ -0.38
NEK9-206ENST00000555537 CDC42BPGQ6DT37 1551 aa12.69□□□□□ -0.38
NEK9-206ENST00000555537 A0A0G2JS52 829 aa12.68□□□□□ -0.38
NEK9-206ENST00000555537 ONECUT3O60422 494 aaPredicted RBP12.68□□□□□ -0.38
NEK9-206ENST00000555537 HRCP23327 699 aa12.68□□□□□ -0.38
NEK9-206ENST00000555537 MYT1Q01538 1121 aa12.68□□□□□ -0.38
NEK9-206ENST00000555537 SLC4A1APQ9BWU0 796 aaKnown RBP12.68□□□□□ -0.38
NEK9-206ENST00000555537 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.68□□□□□ -0.38
NEK9-206ENST00000555537 PPLO60437 1756 aa12.67□□□□□ -0.38
NEK9-206ENST00000555537 FAM83GA6ND36 823 aa12.67□□□□□ -0.38
NEK9-206ENST00000555537 FAM182BQ5T319 152 aa12.67□□□□□ -0.38
NEK9-206ENST00000555537 EN1Q05925 392 aaPredicted RBP12.66□□□□□ -0.38
NEK9-206ENST00000555537 BAG6P46379 1132 aa12.65□□□□□ -0.38
NEK9-206ENST00000555537 PSME1Q06323 249 aa12.65□□□□□ -0.38
NEK9-206ENST00000555537 FAM98CQ17RN3 349 aaKnown RBP12.65□□□□□ -0.38
NEK9-206ENST00000555537 PHF8Q9UPP1 1060 aa12.65□□□□□ -0.38
NEK9-206ENST00000555537 USP32Q8NFA0 1604 aa12.65□□□□□ -0.38
NEK9-206ENST00000555537 R3HDM1Q15032 1099 aaKnown RBP12.64□□□□□ -0.39
NEK9-206ENST00000555537 ABCC11Q96J66 1382 aa12.64□□□□□ -0.39
NEK9-206ENST00000555537 CCDC144AA2RUR9 1427 aa12.63□□□□□ -0.39
NEK9-206ENST00000555537 LRP5O75197 1615 aa12.63□□□□□ -0.39
NEK9-206ENST00000555537 SAFB2Q14151 953 aaKnown RBP eCLIP12.63□□□□□ -0.39
NEK9-206ENST00000555537 PMFBP1Q8TBY8 1022 aa12.63□□□□□ -0.39
NEK9-206ENST00000555537 TNS3Q68CZ2 1445 aa12.62□□□□□ -0.39
NEK9-206ENST00000555537 RGPD8O14715 1765 aaPredicted RBP12.62□□□□□ -0.39
NEK9-206ENST00000555537 BTG4Q9NY30 223 aa12.62□□□□□ -0.39
NEK9-206ENST00000555537 FMN2Q9NZ56 1722 aa12.62□□□□□ -0.39
NEK9-206ENST00000555537 TECPR2O15040 1411 aa12.62□□□□□ -0.39
NEK9-206ENST00000555537 RRBP1Q9P2E9 1410 aaKnown RBP12.62□□□□□ -0.39
NEK9-206ENST00000555537 PLCH1Q4KWH8 1693 aa12.61□□□□□ -0.39
NEK9-206ENST00000555537 EZH2Q15910 746 aaKnown RBP12.6□□□□□ -0.39
NEK9-206ENST00000555537 YTHDC2Q9H6S0 1430 aaKnown RBP12.6□□□□□ -0.39
NEK9-206ENST00000555537 KIF1AQ12756 1690 aa12.59□□□□□ -0.39
NEK9-206ENST00000555537 SBNO1A3KN83 1393 aa12.58□□□□□ -0.4
NEK9-206ENST00000555537 CFAP70Q5T0N1 1121 aa12.58□□□□□ -0.4
NEK9-206ENST00000555537 PRAM1Q96QH2 718 aa12.58□□□□□ -0.4
NEK9-206ENST00000555537 NWD2Q9ULI1 1742 aa12.58□□□□□ -0.4
NEK9-206ENST00000555537 SPATA31E1Q6ZUB1 1445 aa12.57□□□□□ -0.4
NEK9-206ENST00000555537 SIRT1Q96EB6 747 aa12.57□□□□□ -0.4
NEK9-206ENST00000555537 ARHGEF10O15013 1369 aa12.56□□□□□ -0.4
NEK9-206ENST00000555537 ANKRD30BQ9BXX2 1392 aa12.56□□□□□ -0.4
NEK9-206ENST00000555537 C14orf93Q9H972 538 aaKnown RBP12.56□□□□□ -0.4
NEK9-206ENST00000555537 NRXN1Q9ULB1 1477 aa12.56□□□□□ -0.4
NEK9-206ENST00000555537 PIK3C2GO75747 1445 aa12.55□□□□□ -0.4
NEK9-206ENST00000555537 KNDC1Q76NI1 1749 aa12.55□□□□□ -0.4
NEK9-206ENST00000555537 ABCA3Q99758 1704 aa12.55□□□□□ -0.4
NEK9-206ENST00000555537 IFT172Q9UG01 1749 aa12.55□□□□□ -0.4
NEK9-206ENST00000555537 TRIM37O94972 964 aa12.55□□□□□ -0.4
NEK9-206ENST00000555537 HIRIP3Q9BW71 556 aaPredicted RBP12.55□□□□□ -0.4
NEK9-206ENST00000555537 SPATA31A5Q5VU36 1347 aa12.55□□□□□ -0.4
NEK9-206ENST00000555537 SPATA31A7Q8IWB4 1347 aa12.55□□□□□ -0.4
NEK9-206ENST00000555537 CAMKK2Q96RR4 588 aa12.54□□□□□ -0.4
NEK9-206ENST00000555537 MPHOSPH9Q99550 1183 aa12.54□□□□□ -0.4
NEK9-206ENST00000555537 POGKQ9P215 609 aa12.54□□□□□ -0.4
NEK9-206ENST00000555537 NRAPQ86VF7 1730 aa12.54□□□□□ -0.4
NEK9-206ENST00000555537 DHX57Q6P158 1386 aaKnown RBP12.53□□□□□ -0.4
NEK9-206ENST00000555537 PAK3O75914 559 aaPredicted RBP12.52□□□□□ -0.41
NEK9-206ENST00000555537 APBA3O96018 575 aa12.52□□□□□ -0.41
NEK9-206ENST00000555537 YY1P25490 414 aa12.52□□□□□ -0.41
NEK9-206ENST00000555537 CHRNA2Q15822 529 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 227.5 ms