RNA–Protein interactions for RNA: ENST00000554133.5

LINC01578-202, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 2

Gene LINC01578, Length 1,776 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-202ENST00000554133 KRTAP4-8A0A0G2JLE6 195 aa6.9□□□□□ -1.3
LINC01578-202ENST00000554133 SLC10A3P09131 477 aa6.9□□□□□ -1.3
LINC01578-202ENST00000554133 H3BM21 787 aa6.9□□□□□ -1.31
LINC01578-202ENST00000554133 J3QL48 77 aa6.9□□□□□ -1.31
LINC01578-202ENST00000554133 LCE3BQ5TA77 95 aa6.9□□□□□ -1.31
LINC01578-202ENST00000554133 ARIH1Q9Y4X5 557 aaPredicted RBP6.9□□□□□ -1.31
LINC01578-202ENST00000554133 PUS10Q3MIT2 529 aaKnown RBP6.89□□□□□ -1.31
LINC01578-202ENST00000554133 HPS1Q92902 700 aa6.89□□□□□ -1.31
LINC01578-202ENST00000554133 RCCD1A6NED2 376 aa6.88□□□□□ -1.31
LINC01578-202ENST00000554133 VEGFBP49765 207 aa6.87□□□□□ -1.31
LINC01578-202ENST00000554133 TMEM151AQ8N4L1 468 aa6.87□□□□□ -1.31
LINC01578-202ENST00000554133 E2F4Q16254 413 aa6.86□□□□□ -1.31
LINC01578-202ENST00000554133 ERBB4Q15303 1308 aa6.86□□□□□ -1.31
LINC01578-202ENST00000554133 RSPH4AQ5TD94 716 aa6.85□□□□□ -1.31
LINC01578-202ENST00000554133 MRGPRX2Q96LB1 330 aa6.85□□□□□ -1.31
LINC01578-202ENST00000554133 ADGRG1Q9Y653 693 aa6.85□□□□□ -1.31
LINC01578-202ENST00000554133 GSK3AP49840 483 aa6.84□□□□□ -1.31
LINC01578-202ENST00000554133 FAM160A2Q8N612 972 aaPredicted RBP6.84□□□□□ -1.31
LINC01578-202ENST00000554133 FMNL1O95466 1100 aaPredicted RBP6.83□□□□□ -1.32
LINC01578-202ENST00000554133 THAP11Q96EK4 314 aa6.83□□□□□ -1.32
LINC01578-202ENST00000554133 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.82□□□□□ -1.32
LINC01578-202ENST00000554133 TULP1O00294 542 aaPredicted RBP6.82□□□□□ -1.32
LINC01578-202ENST00000554133 GDF11O95390 407 aa6.82□□□□□ -1.32
LINC01578-202ENST00000554133 REPIN1Q9BWE0 567 aaKnown RBP6.82□□□□□ -1.32
LINC01578-202ENST00000554133 TRIM32Q13049 653 aa6.81□□□□□ -1.32
LINC01578-202ENST00000554133 KCNV2Q8TDN2 545 aa6.81□□□□□ -1.32
LINC01578-202ENST00000554133 GTF3C3Q9Y5Q9 886 aa6.81□□□□□ -1.32
LINC01578-202ENST00000554133 RASSF7Q02833 373 aa6.8□□□□□ -1.32
LINC01578-202ENST00000554133 MORN1Q5T089 497 aa6.8□□□□□ -1.32
LINC01578-202ENST00000554133 ERICH6Q7L0X2 663 aa6.8□□□□□ -1.32
LINC01578-202ENST00000554133 TRIM46Q7Z4K8 759 aa6.8□□□□□ -1.32
LINC01578-202ENST00000554133 TMEM132AQ24JP5 1023 aa6.79□□□□□ -1.32
LINC01578-202ENST00000554133 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.79□□□□□ -1.32
LINC01578-202ENST00000554133 KRTAP9-9Q9BYP9 154 aa6.79□□□□□ -1.32
LINC01578-202ENST00000554133 KRTAP9-4Q9BYQ2 154 aa6.79□□□□□ -1.32
LINC01578-202ENST00000554133 PRDM9Q9NQV7 894 aa6.79□□□□□ -1.32
LINC01578-202ENST00000554133 FAM161AQ3B820 660 aa6.77□□□□□ -1.33
LINC01578-202ENST00000554133 SALL2Q9Y467 1007 aaPredicted RBP6.77□□□□□ -1.33
LINC01578-202ENST00000554133 PTGDRQ13258 359 aa6.77□□□□□ -1.33
LINC01578-202ENST00000554133 BRICD5Q6PL45 260 aa6.77□□□□□ -1.33
LINC01578-202ENST00000554133 ATP6V1AP38606 617 aa6.76□□□□□ -1.33
LINC01578-202ENST00000554133 MSS51Q4VC12 460 aa6.76□□□□□ -1.33
LINC01578-202ENST00000554133 RC3H1Q5TC82 1133 aaKnown RBP6.76□□□□□ -1.33
LINC01578-202ENST00000554133 ARHGEF1Q92888 912 aaKnown RBP6.76□□□□□ -1.33
LINC01578-202ENST00000554133 CAPN5O15484 640 aaPredicted RBP6.75□□□□□ -1.33
LINC01578-202ENST00000554133 BMP1P13497 986 aa6.75□□□□□ -1.33
LINC01578-202ENST00000554133 FECHP22830 423 aa6.75□□□□□ -1.33
LINC01578-202ENST00000554133 TIMELESSQ9UNS1 1208 aa6.75□□□□□ -1.33
LINC01578-202ENST00000554133 SLC27A5Q9Y2P5 690 aa6.75□□□□□ -1.33
LINC01578-202ENST00000554133 RNF225M0QZC1 329 aaPredicted RBP6.74□□□□□ -1.33
LINC01578-202ENST00000554133 VSIG8P0DPA2 414 aa6.74□□□□□ -1.33
LINC01578-202ENST00000554133 ALDH1A1P00352 501 aa6.74□□□□□ -1.33
LINC01578-202ENST00000554133 KRTAP4-7Q9BYR0 210 aa6.74□□□□□ -1.33
LINC01578-202ENST00000554133 IGHA1P01876 353 aa6.73□□□□□ -1.33
LINC01578-202ENST00000554133 FUT2Q10981 343 aa6.72□□□□□ -1.33
LINC01578-202ENST00000554133 OATP04181 439 aa6.72□□□□□ -1.33
LINC01578-202ENST00000554133 RDH13Q8NBN7 331 aa6.72□□□□□ -1.33
LINC01578-202ENST00000554133 WNT7BP56706 349 aa6.71□□□□□ -1.34
LINC01578-202ENST00000554133 PXYLP1Q8TE99 480 aa6.71□□□□□ -1.34
LINC01578-202ENST00000554133 KRTAP17-1Q9BYP8 105 aa6.71□□□□□ -1.34
LINC01578-202ENST00000554133 GPAT2Q6NUI2 795 aa6.7□□□□□ -1.34
LINC01578-202ENST00000554133 ZFP42Q96MM3 310 aa6.7□□□□□ -1.34
LINC01578-202ENST00000554133 MMP16P51512 607 aa6.69□□□□□ -1.34
LINC01578-202ENST00000554133 SKOR1P84550 965 aa6.69□□□□□ -1.34
LINC01578-202ENST00000554133 ADAMTS8Q9UP79 889 aa6.69□□□□□ -1.34
LINC01578-202ENST00000554133 WASF2Q9Y6W5 498 aa6.69□□□□□ -1.34
LINC01578-202ENST00000554133 RNF19BQ6ZMZ0 732 aa6.68□□□□□ -1.34
LINC01578-202ENST00000554133 NUTM2FA1L443 756 aa6.67□□□□□ -1.34
LINC01578-202ENST00000554133 SMYD5Q6GMV2 418 aa6.67□□□□□ -1.34
LINC01578-202ENST00000554133 ZC3H15Q8WU90 426 aaKnown RBP6.67□□□□□ -1.34
LINC01578-202ENST00000554133 DNMT3AQ9Y6K1 912 aaPredicted RBP6.67□□□□□ -1.34
LINC01578-202ENST00000554133 SEMA3EO15041 775 aa6.67□□□□□ -1.34
LINC01578-202ENST00000554133 GCGRP47871 477 aa6.67□□□□□ -1.34
LINC01578-202ENST00000554133 CCDC24Q8N4L8 307 aa6.67□□□□□ -1.34
LINC01578-202ENST00000554133 TESPA1A2RU30 521 aaPredicted RBP6.66□□□□□ -1.34
LINC01578-202ENST00000554133 Q3C1V9 767 aa6.66□□□□□ -1.34
LINC01578-202ENST00000554133 DAXXQ9UER7 740 aaPredicted RBP6.66□□□□□ -1.34
LINC01578-202ENST00000554133 SIAH2O43255 324 aa6.65□□□□□ -1.34
LINC01578-202ENST00000554133 MLLT3P42568 568 aaPredicted RBP6.65□□□□□ -1.34
LINC01578-202ENST00000554133 BRPF1P55201 1214 aaPredicted RBP6.65□□□□□ -1.34
LINC01578-202ENST00000554133 FOXK2Q01167 660 aa6.65□□□□□ -1.34
LINC01578-202ENST00000554133 SCARF1Q14162 830 aa6.65□□□□□ -1.34
LINC01578-202ENST00000554133 GRIPAP1Q4V328 841 aa6.65□□□□□ -1.34
LINC01578-202ENST00000554133 DDX11L8A8MPP1 907 aa6.64□□□□□ -1.35
LINC01578-202ENST00000554133 DXOO77932 396 aaKnown RBP6.64□□□□□ -1.35
LINC01578-202ENST00000554133 C14orf37Q86TY3 774 aa6.64□□□□□ -1.35
LINC01578-202ENST00000554133 FCHSD2O94868 740 aa6.64□□□□□ -1.35
LINC01578-202ENST00000554133 NEUROD2Q15784 382 aa6.63□□□□□ -1.35
LINC01578-202ENST00000554133 SOBPA7XYQ1 873 aa6.62□□□□□ -1.35
LINC01578-202ENST00000554133 IRS1P35568 1242 aa6.62□□□□□ -1.35
LINC01578-202ENST00000554133 MRPL14Q6P1L8 145 aaKnown RBP6.62□□□□□ -1.35
LINC01578-202ENST00000554133 METTL3Q86U44 580 aaKnown RBP6.62□□□□□ -1.35
LINC01578-202ENST00000554133 EHBP1Q8NDI1 1231 aa6.62□□□□□ -1.35
LINC01578-202ENST00000554133 KRTAP4-12Q9BQ66 201 aa6.62□□□□□ -1.35
LINC01578-202ENST00000554133 SLC24A3Q9HC58 644 aa6.62□□□□□ -1.35
LINC01578-202ENST00000554133 PPFIA3O75145 1194 aa6.61□□□□□ -1.35
LINC01578-202ENST00000554133 PURBQ96QR8 312 aaKnown RBP6.6□□□□□ -1.35
LINC01578-202ENST00000554133 USB1Q9BQ65 265 aaKnown RBP6.6□□□□□ -1.35
LINC01578-202ENST00000554133 KANK3Q6NY19 840 aa6.59□□□□□ -1.35
LINC01578-202ENST00000554133 SULF1Q8IWU6 871 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms