RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 MINK1Q8N4C8 1332 aaPredicted RBP24.21■■□□□ 1.47
PSEN1-206ENST00000553447 WAPLQ7Z5K2 1190 aa24.21■■□□□ 1.47
PSEN1-206ENST00000553447 ROBO2Q9HCK4 1378 aa24.2■■□□□ 1.46
PSEN1-206ENST00000553447 PTCH1Q13635 1447 aa24.18■■□□□ 1.46
PSEN1-206ENST00000553447 PANK3Q9H999 370 aa24.18■■□□□ 1.46
PSEN1-206ENST00000553447 NCKAP5LQ9HCH0 1330 aa24.17■■□□□ 1.46
PSEN1-206ENST00000553447 AMOTL2Q9Y2J4 779 aa24.17■■□□□ 1.46
PSEN1-206ENST00000553447 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.17■■□□□ 1.46
PSEN1-206ENST00000553447 ADGRB2O60241 1585 aa24.16■■□□□ 1.46
PSEN1-206ENST00000553447 LMTK3Q96Q04 1460 aa24.15■■□□□ 1.46
PSEN1-206ENST00000553447 PER1O15534 1290 aaPredicted RBP24.14■■□□□ 1.45
PSEN1-206ENST00000553447 PRKRIP1Q9H875 184 aaPredicted RBP24.14■■□□□ 1.45
PSEN1-206ENST00000553447 CABP2Q9NPB3 220 aa24.13■■□□□ 1.45
PSEN1-206ENST00000553447 CCER2I3L3R5 266 aa24.12■■□□□ 1.45
PSEN1-206ENST00000553447 SRPK2P78362 688 aaKnown RBP24.12■■□□□ 1.45
PSEN1-206ENST00000553447 CDK19Q9BWU1 502 aa24.11■■□□□ 1.45
PSEN1-206ENST00000553447 ATAD2Q6PL18 1390 aa24.11■■□□□ 1.45
PSEN1-206ENST00000553447 NWD1Q149M9 1564 aa24.09■■□□□ 1.45
PSEN1-206ENST00000553447 NINLQ9Y2I6 1382 aa24.09■■□□□ 1.45
PSEN1-206ENST00000553447 TMC1Q8TDI8 760 aa24.08■■□□□ 1.45
PSEN1-206ENST00000553447 STRCQ7RTU9 1775 aa24.07■■□□□ 1.44
PSEN1-206ENST00000553447 WASLO00401 505 aaPredicted RBP24.07■■□□□ 1.44
PSEN1-206ENST00000553447 KCNA6P17658 529 aa24.07■■□□□ 1.44
PSEN1-206ENST00000553447 HSPA2P54652 639 aa24.07■■□□□ 1.44
PSEN1-206ENST00000553447 SLC12A5Q9H2X9 1139 aa24.06■■□□□ 1.44
PSEN1-206ENST00000553447 KTN1Q86UP2 1357 aaKnown RBP24.05■■□□□ 1.44
PSEN1-206ENST00000553447 USP32Q8NFA0 1604 aa24.04■■□□□ 1.44
PSEN1-206ENST00000553447 KNSTRNQ9Y448 316 aa24.04■■□□□ 1.44
PSEN1-206ENST00000553447 ANKRD36BQ8N2N9 1353 aa24.03■■□□□ 1.44
PSEN1-206ENST00000553447 PARD3Q8TEW0 1356 aa24.02■■□□□ 1.44
PSEN1-206ENST00000553447 NALCNQ8IZF0 1738 aa24.01■■□□□ 1.43
PSEN1-206ENST00000553447 CNGB1Q14028 1251 aaPredicted RBP24.01■■□□□ 1.43
PSEN1-206ENST00000553447 RALBP1Q15311 655 aa24.01■■□□□ 1.43
PSEN1-206ENST00000553447 CARD14Q9BXL6 1004 aa24.01■■□□□ 1.43
PSEN1-206ENST00000553447 TOPAZ1Q8N9V7 1692 aa24.01■■□□□ 1.43
PSEN1-206ENST00000553447 NPC1L1Q9UHC9 1359 aa24.01■■□□□ 1.43
PSEN1-206ENST00000553447 AMER1Q5JTC6 1135 aaPredicted RBP23.99■■□□□ 1.43
PSEN1-206ENST00000553447 NSD3Q9BZ95 1437 aa23.99■■□□□ 1.43
PSEN1-206ENST00000553447 ATP7BP35670 1465 aa23.99■■□□□ 1.43
PSEN1-206ENST00000553447 CD163L1Q9NR16 1453 aa23.99■■□□□ 1.43
PSEN1-206ENST00000553447 ITSN1Q15811 1721 aa23.98■■□□□ 1.43
PSEN1-206ENST00000553447 FMN2Q9NZ56 1722 aa23.98■■□□□ 1.43
PSEN1-206ENST00000553447 STRCP1A6NGW2 1772 aa23.97■■□□□ 1.43
PSEN1-206ENST00000553447 CC2D1BQ5T0F9 858 aaKnown RBP23.97■■□□□ 1.43
PSEN1-206ENST00000553447 AKAP12Q02952 1782 aa23.96■■□□□ 1.43
PSEN1-206ENST00000553447 NKTRP30414 1462 aaKnown RBP23.96■■□□□ 1.43
PSEN1-206ENST00000553447 A0A1W2PP64 1363 aa23.96■■□□□ 1.43
PSEN1-206ENST00000553447 NUDT16Q96DE0 195 aaKnown RBP23.96■■□□□ 1.43
PSEN1-206ENST00000553447 CDC42BPGQ6DT37 1551 aa23.95■■□□□ 1.43
PSEN1-206ENST00000553447 PPIP5K1Q6PFW1 1433 aa23.95■■□□□ 1.42
PSEN1-206ENST00000553447 RGPD8O14715 1765 aaPredicted RBP23.95■■□□□ 1.42
PSEN1-206ENST00000553447 MYBBP1AQ9BQG0 1328 aaKnown RBP23.94■■□□□ 1.42
PSEN1-206ENST00000553447 PRR36Q9H6K5 1346 aa23.94■■□□□ 1.42
PSEN1-206ENST00000553447 TERF2IPQ9NYB0 399 aa23.94■■□□□ 1.42
PSEN1-206ENST00000553447 CABP1Q9NZU7 370 aa23.94■■□□□ 1.42
PSEN1-206ENST00000553447 MON2Q7Z3U7 1717 aa23.93■■□□□ 1.42
PSEN1-206ENST00000553447 CCDC61Q9Y6R9 512 aa23.92■■□□□ 1.42
PSEN1-206ENST00000553447 ADGRL3Q9HAR2 1447 aa23.92■■□□□ 1.42
PSEN1-206ENST00000553447 KIF20BQ96Q89 1820 aa23.91■■□□□ 1.42
PSEN1-206ENST00000553447 CCDC184Q52MB2 194 aa23.91■■□□□ 1.42
PSEN1-206ENST00000553447 HDGFL2Q7Z4V5 671 aaPredicted RBP23.91■■□□□ 1.42
PSEN1-206ENST00000553447 ANKRD26Q9UPS8 1709 aa23.9■■□□□ 1.42
PSEN1-206ENST00000553447 CPSF1Q10570 1443 aaKnown RBP23.89■■□□□ 1.41
PSEN1-206ENST00000553447 ANKARQ7Z5J8 1434 aa23.89■■□□□ 1.41
PSEN1-206ENST00000553447 MRS2Q9HD23 443 aa23.88■■□□□ 1.41
PSEN1-206ENST00000553447 CGNL1Q0VF96 1302 aa23.87■■□□□ 1.41
PSEN1-206ENST00000553447 YTHDC1Q96MU7 727 aaKnown RBP23.87■■□□□ 1.41
PSEN1-206ENST00000553447 BRD4O60885 1362 aaPredicted RBP23.87■■□□□ 1.41
PSEN1-206ENST00000553447 NSD2O96028 1365 aa23.87■■□□□ 1.41
PSEN1-206ENST00000553447 NLRP13Q86W25 1043 aa23.85■■□□□ 1.41
PSEN1-206ENST00000553447 PROSER2Q86WR7 435 aaPredicted RBP23.85■■□□□ 1.41
PSEN1-206ENST00000553447 NUTM2FA1L443 756 aa23.84■■□□□ 1.41
PSEN1-206ENST00000553447 RBM33Q96EV2 1170 aaKnown RBP23.84■■□□□ 1.41
PSEN1-206ENST00000553447 PLEKHG3A1L390 1219 aa23.83■■□□□ 1.41
PSEN1-206ENST00000553447 NRKQ7Z2Y5 1582 aa23.82■■□□□ 1.4
PSEN1-206ENST00000553447 EDC4Q6P2E9 1401 aaKnown RBP23.82■■□□□ 1.4
PSEN1-206ENST00000553447 PPP2R1AP30153 589 aa23.81■■□□□ 1.4
PSEN1-206ENST00000553447 XIRP1Q702N8 1843 aaKnown RBP23.81■■□□□ 1.4
PSEN1-206ENST00000553447 C14orf37Q86TY3 774 aa23.8■■□□□ 1.4
PSEN1-206ENST00000553447 NCOA3Q9Y6Q9 1424 aa23.8■■□□□ 1.4
PSEN1-206ENST00000553447 ZNF692Q9BU19 519 aaPredicted RBP23.79■■□□□ 1.4
PSEN1-206ENST00000553447 MORC1Q86VD1 984 aa23.78■■□□□ 1.4
PSEN1-206ENST00000553447 ACEP12821 1306 aa23.78■■□□□ 1.4
PSEN1-206ENST00000553447 TMEM94Q12767 1356 aa23.77■■□□□ 1.4
PSEN1-206ENST00000553447 POLR3AO14802 1390 aaPredicted RBP23.76■■□□□ 1.39
PSEN1-206ENST00000553447 FYB1O15117 783 aa23.75■■□□□ 1.39
PSEN1-206ENST00000553447 DMRT2Q9Y5R5 561 aa23.75■■□□□ 1.39
PSEN1-206ENST00000553447 USP6P35125 1406 aa23.75■■□□□ 1.39
PSEN1-206ENST00000553447 GGNBP2Q9H3C7 697 aa23.73■■□□□ 1.39
PSEN1-206ENST00000553447 C19orf44Q9H6X5 657 aa23.73■■□□□ 1.39
PSEN1-206ENST00000553447 DCCP43146 1447 aa23.73■■□□□ 1.39
PSEN1-206ENST00000553447 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.72■■□□□ 1.39
PSEN1-206ENST00000553447 FAM9BQ8IZU0 186 aa23.72■■□□□ 1.39
PSEN1-206ENST00000553447 PMFBP1Q8TBY8 1022 aa23.72■■□□□ 1.39
PSEN1-206ENST00000553447 PNISRQ8TF01 805 aaKnown RBP23.72■■□□□ 1.39
PSEN1-206ENST00000553447 LRRC7Q96NW7 1537 aa23.71■■□□□ 1.39
PSEN1-206ENST00000553447 ZNF335Q9H4Z2 1342 aaPredicted RBP23.71■■□□□ 1.39
PSEN1-206ENST00000553447 SSH2Q76I76 1423 aa23.7■■□□□ 1.38
PSEN1-206ENST00000553447 NGDNQ8NEJ9 315 aaKnown RBP23.7■■□□□ 1.38
PSEN1-206ENST00000553447 KIF1AQ12756 1690 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms