RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 SIRT1Q96EB6 747 aa26.65■■□□□ 1.86
RBFOX1-215ENST00000553186 MYBBP1AQ9BQG0 1328 aaKnown RBP26.65■■□□□ 1.86
RBFOX1-215ENST00000553186 CC2D1BQ5T0F9 858 aaKnown RBP26.65■■□□□ 1.86
RBFOX1-215ENST00000553186 SLC12A5Q9H2X9 1139 aa26.64■■□□□ 1.86
RBFOX1-215ENST00000553186 CABP2Q9NPB3 220 aa26.64■■□□□ 1.86
RBFOX1-215ENST00000553186 ZNF142P52746 1687 aaPredicted RBP26.64■■□□□ 1.86
RBFOX1-215ENST00000553186 CARD14Q9BXL6 1004 aa26.64■■□□□ 1.85
RBFOX1-215ENST00000553186 FAM135BQ49AJ0 1406 aa26.63■■□□□ 1.85
RBFOX1-215ENST00000553186 SETD1BQ9UPS6 1966 aaKnown RBP26.63■■□□□ 1.85
RBFOX1-215ENST00000553186 SLC26A8Q96RN1 970 aa26.63■■□□□ 1.85
RBFOX1-215ENST00000553186 KNDC1Q76NI1 1749 aa26.63■■□□□ 1.85
RBFOX1-215ENST00000553186 NPC1L1Q9UHC9 1359 aa26.62■■□□□ 1.85
RBFOX1-215ENST00000553186 TBX22Q9Y458 520 aa26.61■■□□□ 1.85
RBFOX1-215ENST00000553186 CPS1P31327 1500 aa26.61■■□□□ 1.85
RBFOX1-215ENST00000553186 TMC1Q8TDI8 760 aa26.61■■□□□ 1.85
RBFOX1-215ENST00000553186 SRPK2P78362 688 aaKnown RBP26.59■■□□□ 1.85
RBFOX1-215ENST00000553186 BRD4O60885 1362 aaPredicted RBP26.58■■□□□ 1.85
RBFOX1-215ENST00000553186 PTPRUQ92729 1446 aa26.58■■□□□ 1.85
RBFOX1-215ENST00000553186 ROBO2Q9HCK4 1378 aa26.58■■□□□ 1.84
RBFOX1-215ENST00000553186 CDK19Q9BWU1 502 aa26.57■■□□□ 1.84
RBFOX1-215ENST00000553186 ATAD2Q6PL18 1390 aa26.56■■□□□ 1.84
RBFOX1-215ENST00000553186 NLRP13Q86W25 1043 aa26.56■■□□□ 1.84
RBFOX1-215ENST00000553186 DIP2AQ14689 1571 aa26.56■■□□□ 1.84
RBFOX1-215ENST00000553186 NINLQ9Y2I6 1382 aa26.55■■□□□ 1.84
RBFOX1-215ENST00000553186 FAM9BQ8IZU0 186 aa26.54■■□□□ 1.84
RBFOX1-215ENST00000553186 ANKLE2Q86XL3 938 aa26.54■■□□□ 1.84
RBFOX1-215ENST00000553186 ANKRD36BQ8N2N9 1353 aa26.54■■□□□ 1.84
RBFOX1-215ENST00000553186 PNISRQ8TF01 805 aaKnown RBP26.52■■□□□ 1.84
RBFOX1-215ENST00000553186 NSD3Q9BZ95 1437 aa26.51■■□□□ 1.83
RBFOX1-215ENST00000553186 AMOTL2Q9Y2J4 779 aa26.5■■□□□ 1.83
RBFOX1-215ENST00000553186 WASLO00401 505 aaPredicted RBP26.5■■□□□ 1.83
RBFOX1-215ENST00000553186 A0A1W2PP64 1363 aa26.46■■□□□ 1.83
RBFOX1-215ENST00000553186 PIK3R4Q99570 1358 aa26.46■■□□□ 1.83
RBFOX1-215ENST00000553186 PTCH1Q13635 1447 aa26.46■■□□□ 1.83
RBFOX1-215ENST00000553186 CD163L1Q9NR16 1453 aa26.46■■□□□ 1.83
RBFOX1-215ENST00000553186 PPP2R1AP30153 589 aa26.46■■□□□ 1.83
RBFOX1-215ENST00000553186 HNRNPUQ00839 825 aaKnown RBP eCLIP26.46■■□□□ 1.83
RBFOX1-215ENST00000553186 USP32Q8NFA0 1604 aa26.44■■□□□ 1.82
RBFOX1-215ENST00000553186 CABP1Q9NZU7 370 aa26.43■■□□□ 1.82
RBFOX1-215ENST00000553186 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.42■■□□□ 1.82
RBFOX1-215ENST00000553186 ADGRB2O60241 1585 aa26.42■■□□□ 1.82
RBFOX1-215ENST00000553186 XRN1Q8IZH2 1706 aaKnown RBP26.42■■□□□ 1.82
RBFOX1-215ENST00000553186 CGNL1Q0VF96 1302 aa26.42■■□□□ 1.82
RBFOX1-215ENST00000553186 TERF2IPQ9NYB0 399 aa26.41■■□□□ 1.82
RBFOX1-215ENST00000553186 KCNA6P17658 529 aa26.38■■□□□ 1.81
RBFOX1-215ENST00000553186 NUDT16Q96DE0 195 aaKnown RBP26.37■■□□□ 1.81
RBFOX1-215ENST00000553186 NPHP4O75161 1426 aaPredicted RBP26.37■■□□□ 1.81
RBFOX1-215ENST00000553186 ATP7BP35670 1465 aa26.36■■□□□ 1.81
RBFOX1-215ENST00000553186 NSD2O96028 1365 aa26.36■■□□□ 1.81
RBFOX1-215ENST00000553186 HDGFL2Q7Z4V5 671 aaPredicted RBP26.36■■□□□ 1.81
RBFOX1-215ENST00000553186 CCDC61Q9Y6R9 512 aa26.36■■□□□ 1.81
RBFOX1-215ENST00000553186 KDM4FA0A1W2PPD8 638 aa26.35■■□□□ 1.81
RBFOX1-215ENST00000553186 PRR36Q9H6K5 1346 aa26.35■■□□□ 1.81
RBFOX1-215ENST00000553186 PPIP5K1Q6PFW1 1433 aa26.35■■□□□ 1.81
RBFOX1-215ENST00000553186 MORC1Q86VD1 984 aa26.33■■□□□ 1.81
RBFOX1-215ENST00000553186 NCKAP5LQ9HCH0 1330 aa26.33■■□□□ 1.8
RBFOX1-215ENST00000553186 CPSF1Q10570 1443 aaKnown RBP26.32■■□□□ 1.8
RBFOX1-215ENST00000553186 ZBED9Q6R2W3 1325 aa26.3■■□□□ 1.8
RBFOX1-215ENST00000553186 CHD2O14647 1828 aaKnown RBP26.3■■□□□ 1.8
RBFOX1-215ENST00000553186 FYB1O15117 783 aa26.29■■□□□ 1.8
RBFOX1-215ENST00000553186 SCAF1Q9H7N4 1312 aaKnown RBP26.28■■□□□ 1.8
RBFOX1-215ENST00000553186 CDC42BPGQ6DT37 1551 aa26.27■■□□□ 1.8
RBFOX1-215ENST00000553186 INSRP06213 1382 aa26.27■■□□□ 1.8
RBFOX1-215ENST00000553186 GGNBP2Q9H3C7 697 aa26.25■■□□□ 1.79
RBFOX1-215ENST00000553186 TNNT2P45379 298 aaPredicted RBP26.24■■□□□ 1.79
RBFOX1-215ENST00000553186 GTF3C3Q9Y5Q9 886 aa26.23■■□□□ 1.79
RBFOX1-215ENST00000553186 PLEKHG3A1L390 1219 aa26.23■■□□□ 1.79
RBFOX1-215ENST00000553186 EDC4Q6P2E9 1401 aaKnown RBP26.23■■□□□ 1.79
RBFOX1-215ENST00000553186 TOPAZ1Q8N9V7 1692 aa26.22■■□□□ 1.79
RBFOX1-215ENST00000553186 POLR3AO14802 1390 aaPredicted RBP26.22■■□□□ 1.79
RBFOX1-215ENST00000553186 NUTM2FA1L443 756 aa26.22■■□□□ 1.79
RBFOX1-215ENST00000553186 ADAMTS8Q9UP79 889 aa26.21■■□□□ 1.79
RBFOX1-215ENST00000553186 ZNF692Q9BU19 519 aaPredicted RBP26.2■■□□□ 1.79
RBFOX1-215ENST00000553186 BLMP54132 1417 aaPredicted RBP26.2■■□□□ 1.78
RBFOX1-215ENST00000553186 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.19■■□□□ 1.78
RBFOX1-215ENST00000553186 NKTRP30414 1462 aaKnown RBP26.18■■□□□ 1.78
RBFOX1-215ENST00000553186 MTHFSP49914 203 aa26.17■■□□□ 1.78
RBFOX1-215ENST00000553186 MON2Q7Z3U7 1717 aa26.17■■□□□ 1.78
RBFOX1-215ENST00000553186 ANKRD26Q9UPS8 1709 aa26.17■■□□□ 1.78
RBFOX1-215ENST00000553186 HSPA2P54652 639 aa26.17■■□□□ 1.78
RBFOX1-215ENST00000553186 ACEP12821 1306 aa26.17■■□□□ 1.78
RBFOX1-215ENST00000553186 NWD1Q149M9 1564 aa26.17■■□□□ 1.78
RBFOX1-215ENST00000553186 WDR43Q15061 677 aaKnown RBP eCLIP26.16■■□□□ 1.78
RBFOX1-215ENST00000553186 AKAP12Q02952 1782 aa26.16■■□□□ 1.78
RBFOX1-215ENST00000553186 ANKARQ7Z5J8 1434 aa26.15■■□□□ 1.78
RBFOX1-215ENST00000553186 KIF20BQ96Q89 1820 aa26.15■■□□□ 1.78
RBFOX1-215ENST00000553186 RBM33Q96EV2 1170 aaKnown RBP26.14■■□□□ 1.78
RBFOX1-215ENST00000553186 LMTK3Q96Q04 1460 aa26.14■■□□□ 1.78
RBFOX1-215ENST00000553186 NALCNQ8IZF0 1738 aa26.14■■□□□ 1.77
RBFOX1-215ENST00000553186 SENP3-EIF4A1A0A087X0R7 540 aa26.13■■□□□ 1.77
RBFOX1-215ENST00000553186 ITSN1Q15811 1721 aa26.13■■□□□ 1.77
RBFOX1-215ENST00000553186 ADGRL3Q9HAR2 1447 aa26.13■■□□□ 1.77
RBFOX1-215ENST00000553186 NME9Q86XW9 330 aa26.12■■□□□ 1.77
RBFOX1-215ENST00000553186 FMN2Q9NZ56 1722 aa26.11■■□□□ 1.77
RBFOX1-215ENST00000553186 USP6P35125 1406 aa26.11■■□□□ 1.77
RBFOX1-215ENST00000553186 SSH2Q76I76 1423 aa26.09■■□□□ 1.77
RBFOX1-215ENST00000553186 PMFBP1Q8TBY8 1022 aa26.09■■□□□ 1.77
RBFOX1-215ENST00000553186 NRKQ7Z2Y5 1582 aa26.09■■□□□ 1.77
RBFOX1-215ENST00000553186 TTC21BQ7Z4L5 1316 aa26.08■■□□□ 1.77
RBFOX1-215ENST00000553186 ZRANB1Q9UGI0 708 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms