RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 PIK3C2GO75747 1445 aa16.01■□□□□ 0.15
HDAC7-230ENST00000552960 ARHGAP31Q2M1Z3 1444 aa16.01■□□□□ 0.15
HDAC7-230ENST00000552960 C8orf34Q49A92 452 aa16■□□□□ 0.15
HDAC7-230ENST00000552960 NRXN1Q9ULB1 1477 aa16■□□□□ 0.15
HDAC7-230ENST00000552960 STAG3Q9UJ98 1225 aa16■□□□□ 0.15
HDAC7-230ENST00000552960 CEBPAP49715 358 aaPredicted RBP16■□□□□ 0.15
HDAC7-230ENST00000552960 DUSP27Q5VZP5 1158 aa16■□□□□ 0.15
HDAC7-230ENST00000552960 STAC3Q96MF2 364 aa15.99■□□□□ 0.15
HDAC7-230ENST00000552960 CANXP27824 592 aaKnown RBP15.98■□□□□ 0.15
HDAC7-230ENST00000552960 SLC52A1Q9NWF4 448 aa15.98■□□□□ 0.15
HDAC7-230ENST00000552960 CLTCQ00610 1675 aaKnown RBP15.98■□□□□ 0.15
HDAC7-230ENST00000552960 KDM2BQ8NHM5 1336 aa15.98■□□□□ 0.15
HDAC7-230ENST00000552960 PIK3C2BO00750 1634 aa15.98■□□□□ 0.15
HDAC7-230ENST00000552960 MYO5BQ9ULV0 1848 aa15.98■□□□□ 0.15
HDAC7-230ENST00000552960 SLKQ9H2G2 1235 aaPredicted RBP15.98■□□□□ 0.15
HDAC7-230ENST00000552960 PLEKHH1Q9ULM0 1364 aa15.98■□□□□ 0.15
HDAC7-230ENST00000552960 BCAR3O75815 825 aa15.98■□□□□ 0.15
HDAC7-230ENST00000552960 PPLO60437 1756 aa15.97■□□□□ 0.15
HDAC7-230ENST00000552960 PREX1Q8TCU6 1659 aa15.97■□□□□ 0.15
HDAC7-230ENST00000552960 NEXMIFQ5QGS0 1516 aa15.97■□□□□ 0.15
HDAC7-230ENST00000552960 PPP2R1AP30153 589 aa15.97■□□□□ 0.15
HDAC7-230ENST00000552960 ERVK-7P63135 1459 aa15.97■□□□□ 0.15
HDAC7-230ENST00000552960 VGFO15240 615 aaPredicted RBP15.96■□□□□ 0.15
HDAC7-230ENST00000552960 NEURL4Q96JN8 1562 aa15.96■□□□□ 0.15
HDAC7-230ENST00000552960 APAF1O14727 1248 aa15.96■□□□□ 0.15
HDAC7-230ENST00000552960 CENPJQ9HC77 1338 aaPredicted RBP15.95■□□□□ 0.14
HDAC7-230ENST00000552960 ADGRB1O14514 1584 aa15.94■□□□□ 0.14
HDAC7-230ENST00000552960 ESF1Q9H501 851 aaKnown RBP15.94■□□□□ 0.14
HDAC7-230ENST00000552960 ZMYM3Q14202 1370 aa15.94■□□□□ 0.14
HDAC7-230ENST00000552960 ARHGEF40Q8TER5 1519 aa15.94■□□□□ 0.14
HDAC7-230ENST00000552960 NEUROD2Q15784 382 aa15.94■□□□□ 0.14
HDAC7-230ENST00000552960 RPGRIP1LQ68CZ1 1315 aa15.94■□□□□ 0.14
HDAC7-230ENST00000552960 ZC3H13Q5T200 1668 aaKnown RBP15.93■□□□□ 0.14
HDAC7-230ENST00000552960 CARD14Q9BXL6 1004 aa15.93■□□□□ 0.14
HDAC7-230ENST00000552960 SPINK5Q9NQ38 1064 aaPredicted RBP15.93■□□□□ 0.14
HDAC7-230ENST00000552960 EIF3AQ14152 1382 aaKnown RBP15.93■□□□□ 0.14
HDAC7-230ENST00000552960 BLMP54132 1417 aaPredicted RBP15.93■□□□□ 0.14
HDAC7-230ENST00000552960 SLC12A5Q9H2X9 1139 aa15.93■□□□□ 0.14
HDAC7-230ENST00000552960 AGLP35573 1532 aa15.93■□□□□ 0.14
HDAC7-230ENST00000552960 TMEM131LA2VDJ0 1609 aa15.92■□□□□ 0.14
HDAC7-230ENST00000552960 AMER1Q5JTC6 1135 aaPredicted RBP15.91■□□□□ 0.14
HDAC7-230ENST00000552960 SPRYD3Q8NCJ5 442 aa15.91■□□□□ 0.14
HDAC7-230ENST00000552960 KIAA1210Q9ULL0 1709 aa15.91■□□□□ 0.14
HDAC7-230ENST00000552960 UBE2Q2Q8WVN8 375 aa15.9■□□□□ 0.14
HDAC7-230ENST00000552960 CABP2Q9NPB3 220 aa15.9■□□□□ 0.14
HDAC7-230ENST00000552960 COG6Q9Y2V7 657 aa15.9■□□□□ 0.14
HDAC7-230ENST00000552960 IGHDP01880 384 aa15.9■□□□□ 0.14
HDAC7-230ENST00000552960 SLFN5Q08AF3 891 aa15.9■□□□□ 0.14
HDAC7-230ENST00000552960 TNNT2P45379 298 aaPredicted RBP15.89■□□□□ 0.13
HDAC7-230ENST00000552960 POGKQ9P215 609 aa15.89■□□□□ 0.13
HDAC7-230ENST00000552960 REREQ9P2R6 1566 aa15.89■□□□□ 0.13
HDAC7-230ENST00000552960 PANK1Q8TE04 598 aa15.89■□□□□ 0.13
HDAC7-230ENST00000552960 SEC24BO95487 1268 aa15.89■□□□□ 0.13
HDAC7-230ENST00000552960 ASXL1Q8IXJ9 1541 aa15.88■□□□□ 0.13
HDAC7-230ENST00000552960 MINK1Q8N4C8 1332 aaPredicted RBP15.88■□□□□ 0.13
HDAC7-230ENST00000552960 PRAM1Q96QH2 718 aa15.87■□□□□ 0.13
HDAC7-230ENST00000552960 WAPLQ7Z5K2 1190 aa15.87■□□□□ 0.13
HDAC7-230ENST00000552960 A2ML1A8K2U0 1454 aa15.87■□□□□ 0.13
HDAC7-230ENST00000552960 MYOM1P52179 1685 aa15.86■□□□□ 0.13
HDAC7-230ENST00000552960 CDCA8Q53HL2 280 aa15.86■□□□□ 0.13
HDAC7-230ENST00000552960 DMRT2Q9Y5R5 561 aa15.86■□□□□ 0.13
HDAC7-230ENST00000552960 PPP6R1Q9UPN7 881 aa15.85■□□□□ 0.13
HDAC7-230ENST00000552960 BCL2L13Q9BXK5 485 aa15.85■□□□□ 0.13
HDAC7-230ENST00000552960 RRP7AQ9Y3A4 280 aaKnown RBP15.85■□□□□ 0.13
HDAC7-230ENST00000552960 SETBP1Q9Y6X0 1596 aa15.85■□□□□ 0.13
HDAC7-230ENST00000552960 BECN1Q14457 450 aa15.84■□□□□ 0.13
HDAC7-230ENST00000552960 CLUAP1Q96AJ1 413 aa15.83■□□□□ 0.12
HDAC7-230ENST00000552960 RIMS2Q9UQ26 1411 aa15.83■□□□□ 0.12
HDAC7-230ENST00000552960 SPATA31D1Q6ZQQ2 1576 aa15.83■□□□□ 0.12
HDAC7-230ENST00000552960 GZF1Q9H116 711 aaPredicted RBP15.83■□□□□ 0.12
HDAC7-230ENST00000552960 QRICH2Q9H0J4 1663 aa15.82■□□□□ 0.12
HDAC7-230ENST00000552960 ZNF521Q96K83 1311 aa15.82■□□□□ 0.12
HDAC7-230ENST00000552960 KDM5AP29375 1690 aaKnown RBP15.81■□□□□ 0.12
HDAC7-230ENST00000552960 SRPK2P78362 688 aaKnown RBP15.81■□□□□ 0.12
HDAC7-230ENST00000552960 E9PSI1 815 aa15.81■□□□□ 0.12
HDAC7-230ENST00000552960 UPF2Q9HAU5 1272 aaKnown RBP15.81■□□□□ 0.12
HDAC7-230ENST00000552960 PTPRMP28827 1452 aa15.81■□□□□ 0.12
HDAC7-230ENST00000552960 YTHDC2Q9H6S0 1430 aaKnown RBP15.8■□□□□ 0.12
HDAC7-230ENST00000552960 TNRQ92752 1358 aa15.8■□□□□ 0.12
HDAC7-230ENST00000552960 TULP4Q9NRJ4 1543 aa15.8■□□□□ 0.12
HDAC7-230ENST00000552960 ZFYVE9O95405 1425 aa15.8■□□□□ 0.12
HDAC7-230ENST00000552960 METP08581 1390 aa15.8■□□□□ 0.12
HDAC7-230ENST00000552960 ALKQ9UM73 1620 aa15.8■□□□□ 0.12
HDAC7-230ENST00000552960 LTKP29376 864 aa15.79■□□□□ 0.12
HDAC7-230ENST00000552960 TXNDC2Q86VQ3 553 aa15.79■□□□□ 0.12
HDAC7-230ENST00000552960 MYO3AQ8NEV4 1616 aa15.79■□□□□ 0.12
HDAC7-230ENST00000552960 SBNO2Q9Y2G9 1366 aa15.79■□□□□ 0.12
HDAC7-230ENST00000552960 ARHGEF28Q8N1W1 1705 aaKnown RBP15.79■□□□□ 0.12
HDAC7-230ENST00000552960 NSD3Q9BZ95 1437 aa15.78■□□□□ 0.12
HDAC7-230ENST00000552960 TNNQ9UQP3 1299 aa15.77■□□□□ 0.12
HDAC7-230ENST00000552960 USP19O94966 1318 aa15.77■□□□□ 0.12
HDAC7-230ENST00000552960 CGNL1Q0VF96 1302 aa15.77■□□□□ 0.11
HDAC7-230ENST00000552960 EVC2Q86UK5 1308 aa15.77■□□□□ 0.11
HDAC7-230ENST00000552960 NCKAP5LQ9HCH0 1330 aa15.77■□□□□ 0.11
HDAC7-230ENST00000552960 NKTRP30414 1462 aaKnown RBP15.77■□□□□ 0.11
HDAC7-230ENST00000552960 SLC26A8Q96RN1 970 aa15.76■□□□□ 0.11
HDAC7-230ENST00000552960 INSRP06213 1382 aa15.76■□□□□ 0.11
HDAC7-230ENST00000552960 FAM43AQ8N2R8 423 aa15.75■□□□□ 0.11
HDAC7-230ENST00000552960 MAPK8IP3Q9UPT6 1336 aa15.75■□□□□ 0.11
HDAC7-230ENST00000552960 CDK19Q9BWU1 502 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms