RNA–Protein interactions for RNA: ENST00000550929.5

LETMD1-228, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LETMD1, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-228ENST00000550929 LRP6O75581 1613 aa13.5□□□□□ -0.25
LETMD1-228ENST00000550929 SPATA31A6Q5VVP1 1343 aa13.5□□□□□ -0.25
LETMD1-228ENST00000550929 RPGRIP1LQ68CZ1 1315 aa13.5□□□□□ -0.25
LETMD1-228ENST00000550929 ADGRF5Q8IZF2 1346 aa13.49□□□□□ -0.25
LETMD1-228ENST00000550929 ROBO2Q9HCK4 1378 aa13.49□□□□□ -0.25
LETMD1-228ENST00000550929 DCCP43146 1447 aa13.49□□□□□ -0.25
LETMD1-228ENST00000550929 ADGRL3Q9HAR2 1447 aa13.49□□□□□ -0.25
LETMD1-228ENST00000550929 AHDC1Q5TGY3 1603 aaPredicted RBP13.49□□□□□ -0.25
LETMD1-228ENST00000550929 STK26Q9P289 416 aa13.48□□□□□ -0.25
LETMD1-228ENST00000550929 ASXL1Q8IXJ9 1541 aa13.48□□□□□ -0.25
LETMD1-228ENST00000550929 ORAI2Q96SN7 254 aa13.47□□□□□ -0.25
LETMD1-228ENST00000550929 CCDC144AA2RUR9 1427 aa13.47□□□□□ -0.25
LETMD1-228ENST00000550929 TMEM132EQ6IEE7 984 aa13.45□□□□□ -0.26
LETMD1-228ENST00000550929 LRRC59Q96AG4 307 aaKnown RBP13.45□□□□□ -0.26
LETMD1-228ENST00000550929 C1orf167Q5SNV9 1468 aa13.45□□□□□ -0.26
LETMD1-228ENST00000550929 NALCNQ8IZF0 1738 aa13.45□□□□□ -0.26
LETMD1-228ENST00000550929 WAPLQ7Z5K2 1190 aa13.45□□□□□ -0.26
LETMD1-228ENST00000550929 NUTM2FA1L443 756 aa13.44□□□□□ -0.26
LETMD1-228ENST00000550929 ZNF772Q68DY9 489 aaPredicted RBP13.44□□□□□ -0.26
LETMD1-228ENST00000550929 CHRDL2Q6WN34 429 aa13.44□□□□□ -0.26
LETMD1-228ENST00000550929 AKT1S1Q96B36 256 aa13.44□□□□□ -0.26
LETMD1-228ENST00000550929 PTCH1Q13635 1447 aa13.43□□□□□ -0.26
LETMD1-228ENST00000550929 SETD5Q9C0A6 1442 aa13.43□□□□□ -0.26
LETMD1-228ENST00000550929 AFF2P51816 1311 aa13.43□□□□□ -0.26
LETMD1-228ENST00000550929 SETD1AO15047 1707 aaKnown RBP13.42□□□□□ -0.26
LETMD1-228ENST00000550929 SHPRHQ149N8 1683 aa13.42□□□□□ -0.26
LETMD1-228ENST00000550929 ADAMTS2O95450 1211 aa13.42□□□□□ -0.26
LETMD1-228ENST00000550929 C8orf37Q96NL8 207 aa13.42□□□□□ -0.26
LETMD1-228ENST00000550929 SPATA31E1Q6ZUB1 1445 aa13.42□□□□□ -0.26
LETMD1-228ENST00000550929 PPLO60437 1756 aa13.41□□□□□ -0.26
LETMD1-228ENST00000550929 PNPLA6Q8IY17 1366 aa13.41□□□□□ -0.26
LETMD1-228ENST00000550929 ESCO1Q5FWF5 840 aa13.41□□□□□ -0.26
LETMD1-228ENST00000550929 RXRBP28702 533 aa13.4□□□□□ -0.26
LETMD1-228ENST00000550929 XPCQ01831 940 aaPredicted RBP13.4□□□□□ -0.26
LETMD1-228ENST00000550929 NHSL1Q5SYE7 1610 aa13.39□□□□□ -0.27
LETMD1-228ENST00000550929 ANKRD30BQ9BXX2 1392 aa13.39□□□□□ -0.27
LETMD1-228ENST00000550929 PLEKHH1Q9ULM0 1364 aa13.39□□□□□ -0.27
LETMD1-228ENST00000550929 LRPPRCP42704 1394 aaKnown RBP13.38□□□□□ -0.27
LETMD1-228ENST00000550929 RAB3GAP2Q9H2M9 1393 aa13.38□□□□□ -0.27
LETMD1-228ENST00000550929 SOS2Q07890 1332 aaPredicted RBP13.38□□□□□ -0.27
LETMD1-228ENST00000550929 FOXO3O43524 673 aa13.37□□□□□ -0.27
LETMD1-228ENST00000550929 CFAP70Q5T0N1 1121 aa13.37□□□□□ -0.27
LETMD1-228ENST00000550929 NGLY1Q96IV0 654 aa13.37□□□□□ -0.27
LETMD1-228ENST00000550929 QTRT2Q9H974 415 aaKnown RBP13.37□□□□□ -0.27
LETMD1-228ENST00000550929 PRAG1Q86YV5 1406 aa13.36□□□□□ -0.27
LETMD1-228ENST00000550929 ABCC11Q96J66 1382 aa13.35□□□□□ -0.27
LETMD1-228ENST00000550929 SAFB2Q14151 953 aaKnown RBP eCLIP13.35□□□□□ -0.27
LETMD1-228ENST00000550929 UPF1Q92900 1129 aaKnown RBP eCLIP13.34□□□□□ -0.276e-9■□□□□ 9.5
LETMD1-228ENST00000550929 C14orf93Q9H972 538 aaKnown RBP13.34□□□□□ -0.27
LETMD1-228ENST00000550929 PIK3C2GO75747 1445 aa13.34□□□□□ -0.27
LETMD1-228ENST00000550929 YTHDC2Q9H6S0 1430 aaKnown RBP13.34□□□□□ -0.27
LETMD1-228ENST00000550929 KDM2AQ9Y2K7 1162 aa13.33□□□□□ -0.27
LETMD1-228ENST00000550929 NPHP3Q7Z494 1330 aa13.33□□□□□ -0.28
LETMD1-228ENST00000550929 PLEKHG5O94827 1062 aa13.32□□□□□ -0.28
LETMD1-228ENST00000550929 IFT172Q9UG01 1749 aa13.32□□□□□ -0.28
LETMD1-228ENST00000550929 TECPR2O15040 1411 aa13.32□□□□□ -0.28
LETMD1-228ENST00000550929 RBM6P78332 1123 aaKnown RBP13.32□□□□□ -0.28
LETMD1-228ENST00000550929 USP21Q9UK80 565 aa13.32□□□□□ -0.28
LETMD1-228ENST00000550929 ACIN1Q9UKV3 1341 aaKnown RBP13.31□□□□□ -0.28
LETMD1-228ENST00000550929 DHX57Q6P158 1386 aaKnown RBP13.31□□□□□ -0.28
LETMD1-228ENST00000550929 CDC42BPGQ6DT37 1551 aa13.31□□□□□ -0.28
LETMD1-228ENST00000550929 PRAM1Q96QH2 718 aa13.31□□□□□ -0.28
LETMD1-228ENST00000550929 REM2Q8IYK8 340 aaPredicted RBP13.3□□□□□ -0.28
LETMD1-228ENST00000550929 KRT28Q7Z3Y7 464 aa13.29□□□□□ -0.28
LETMD1-228ENST00000550929 DCAF11Q8TEB1 546 aa13.29□□□□□ -0.28
LETMD1-228ENST00000550929 SIRT1Q96EB6 747 aa13.29□□□□□ -0.28
LETMD1-228ENST00000550929 POGKQ9P215 609 aa13.29□□□□□ -0.28
LETMD1-228ENST00000550929 TRAK1Q9UPV9 953 aa13.29□□□□□ -0.28
LETMD1-228ENST00000550929 LAMC1P11047 1609 aa13.29□□□□□ -0.28
LETMD1-228ENST00000550929 RGS12O14924 1447 aa13.28□□□□□ -0.28
LETMD1-228ENST00000550929 PXDNQ92626 1479 aa13.28□□□□□ -0.28
LETMD1-228ENST00000550929 FNBP4Q8N3X1 1017 aaPredicted RBP13.27□□□□□ -0.29
LETMD1-228ENST00000550929 HIRIP3Q9BW71 556 aaPredicted RBP13.27□□□□□ -0.29
LETMD1-228ENST00000550929 TRPC5Q9UL62 973 aaPredicted RBP13.27□□□□□ -0.29
LETMD1-228ENST00000550929 PHF8Q9UPP1 1060 aa13.27□□□□□ -0.29
LETMD1-228ENST00000550929 MYOM2P54296 1465 aa13.27□□□□□ -0.29
LETMD1-228ENST00000550929 NRXN1Q9ULB1 1477 aa13.27□□□□□ -0.29
LETMD1-228ENST00000550929 LMOD2Q6P5Q4 547 aa13.26□□□□□ -0.29
LETMD1-228ENST00000550929 PMFBP1Q8TBY8 1022 aa13.26□□□□□ -0.29
LETMD1-228ENST00000550929 SPATA31A3Q5VYP0 1347 aa13.26□□□□□ -0.29
LETMD1-228ENST00000550929 CDK12Q9NYV4 1490 aaPredicted RBP13.26□□□□□ -0.29
LETMD1-228ENST00000550929 KNDC1Q76NI1 1749 aa13.26□□□□□ -0.29
LETMD1-228ENST00000550929 CABLES1Q8TDN4 633 aa13.25□□□□□ -0.29
LETMD1-228ENST00000550929 MINK1Q8N4C8 1332 aaPredicted RBP13.25□□□□□ -0.29
LETMD1-228ENST00000550929 FMN2Q9NZ56 1722 aa13.23□□□□□ -0.29
LETMD1-228ENST00000550929 HAP1P54257 671 aaPredicted RBP13.23□□□□□ -0.29
LETMD1-228ENST00000550929 PSME1Q06323 249 aa13.23□□□□□ -0.29
LETMD1-228ENST00000550929 COL22A1Q8NFW1 1626 aaPredicted RBP13.23□□□□□ -0.29
LETMD1-228ENST00000550929 ATRNO75882 1429 aa13.22□□□□□ -0.29
LETMD1-228ENST00000550929 MKRN4PQ13434 485 aaPredicted RBP13.21□□□□□ -0.29
LETMD1-228ENST00000550929 BCL9LQ86UU0 1499 aa13.21□□□□□ -0.29
LETMD1-228ENST00000550929 SPDYE2BA6NHP3 402 aa13.2□□□□□ -0.3
LETMD1-228ENST00000550929 SPDYE6P0CI01 402 aa13.2□□□□□ -0.3
LETMD1-228ENST00000550929 HRCP23327 699 aa13.2□□□□□ -0.3
LETMD1-228ENST00000550929 SPDYE2Q495Y8 402 aa13.2□□□□□ -0.3
LETMD1-228ENST00000550929 ADGRB1O14514 1584 aa13.2□□□□□ -0.3
LETMD1-228ENST00000550929 GJD4Q96KN9 370 aaPredicted RBP13.2□□□□□ -0.3
LETMD1-228ENST00000550929 RGPD8O14715 1765 aaPredicted RBP13.19□□□□□ -0.3
LETMD1-228ENST00000550929 PRR36Q9H6K5 1346 aa13.19□□□□□ -0.3
LETMD1-228ENST00000550929 DLC1Q96QB1 1528 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms