RNA–Protein interactions for RNA: ENST00000550077.1

AC055716.1-201, humanhuman

BASIC

Gene AC055716.1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.1-201ENST00000550077 PTCH1Q13635 1447 aa13.45□□□□□ -0.26
AC055716.1-201ENST00000550077 PXDNQ92626 1479 aa13.42□□□□□ -0.26
AC055716.1-201ENST00000550077 GJD4Q96KN9 370 aaPredicted RBP13.42□□□□□ -0.26
AC055716.1-201ENST00000550077 ITGAEP38570 1179 aa13.41□□□□□ -0.26
AC055716.1-201ENST00000550077 KIF1BO60333 1816 aa13.41□□□□□ -0.26
AC055716.1-201ENST00000550077 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.4□□□□□ -0.26
AC055716.1-201ENST00000550077 CCDC125Q86Z20 511 aa13.4□□□□□ -0.26
AC055716.1-201ENST00000550077 RALGAPBQ86X10 1494 aa13.4□□□□□ -0.26
AC055716.1-201ENST00000550077 ROCK1Q13464 1354 aa13.39□□□□□ -0.27
AC055716.1-201ENST00000550077 LRP5O75197 1615 aa13.39□□□□□ -0.27
AC055716.1-201ENST00000550077 NUTM2FA1L443 756 aa13.38□□□□□ -0.27
AC055716.1-201ENST00000550077 FOXO3O43524 673 aa13.38□□□□□ -0.27
AC055716.1-201ENST00000550077 ESCO1Q5FWF5 840 aa13.38□□□□□ -0.27
AC055716.1-201ENST00000550077 BLMP54132 1417 aaPredicted RBP13.38□□□□□ -0.27
AC055716.1-201ENST00000550077 PSDA5PKW4 1024 aaPredicted RBP13.37□□□□□ -0.27
AC055716.1-201ENST00000550077 SLIT2O94813 1529 aa13.36□□□□□ -0.27
AC055716.1-201ENST00000550077 RGPD8O14715 1765 aaPredicted RBP13.35□□□□□ -0.27
AC055716.1-201ENST00000550077 PPLO60437 1756 aa13.35□□□□□ -0.27
AC055716.1-201ENST00000550077 UNC5CLQ8IV45 518 aa13.34□□□□□ -0.27
AC055716.1-201ENST00000550077 CDC42BPGQ6DT37 1551 aa13.33□□□□□ -0.28
AC055716.1-201ENST00000550077 PLEKHG5O94827 1062 aa13.33□□□□□ -0.28
AC055716.1-201ENST00000550077 FOXD1Q16676 465 aa13.33□□□□□ -0.28
AC055716.1-201ENST00000550077 PPARGC1BQ86YN6 1023 aaKnown RBP13.33□□□□□ -0.28
AC055716.1-201ENST00000550077 SEPT12Q8IYM1 358 aa13.33□□□□□ -0.28
AC055716.1-201ENST00000550077 PLCH1Q4KWH8 1693 aa13.33□□□□□ -0.28
AC055716.1-201ENST00000550077 NPHP3Q7Z494 1330 aa13.33□□□□□ -0.28
AC055716.1-201ENST00000550077 USP32Q8NFA0 1604 aa13.32□□□□□ -0.28
AC055716.1-201ENST00000550077 PRAG1Q86YV5 1406 aa13.32□□□□□ -0.28
AC055716.1-201ENST00000550077 WAPLQ7Z5K2 1190 aa13.32□□□□□ -0.28
AC055716.1-201ENST00000550077 CABLES1Q8TDN4 633 aa13.32□□□□□ -0.28
AC055716.1-201ENST00000550077 PLEKHH1Q9ULM0 1364 aa13.32□□□□□ -0.28
AC055716.1-201ENST00000550077 HFM1A2PYH4 1435 aa13.31□□□□□ -0.28
AC055716.1-201ENST00000550077 HRCP23327 699 aa13.31□□□□□ -0.28
AC055716.1-201ENST00000550077 NAIPQ13075 1403 aa13.3□□□□□ -0.28
AC055716.1-201ENST00000550077 ABCA3Q99758 1704 aa13.3□□□□□ -0.28
AC055716.1-201ENST00000550077 SPATA31A3Q5VYP0 1347 aa13.3□□□□□ -0.28
AC055716.1-201ENST00000550077 FMN2Q9NZ56 1722 aa13.3□□□□□ -0.28
AC055716.1-201ENST00000550077 VGFO15240 615 aaPredicted RBP13.29□□□□□ -0.28
AC055716.1-201ENST00000550077 FAM182BQ5T319 152 aa13.29□□□□□ -0.28
AC055716.1-201ENST00000550077 STK26Q9P289 416 aa13.28□□□□□ -0.28
AC055716.1-201ENST00000550077 ONECUT3O60422 494 aaPredicted RBP13.27□□□□□ -0.29
AC055716.1-201ENST00000550077 KRT27Q7Z3Y8 459 aa13.27□□□□□ -0.29
AC055716.1-201ENST00000550077 ADGRF5Q8IZF2 1346 aa13.27□□□□□ -0.29
AC055716.1-201ENST00000550077 EN1Q05925 392 aaPredicted RBP13.26□□□□□ -0.29
AC055716.1-201ENST00000550077 SF3B2Q13435 895 aaKnown RBP13.26□□□□□ -0.29
AC055716.1-201ENST00000550077 VPS72Q15906 364 aa13.26□□□□□ -0.29
AC055716.1-201ENST00000550077 TMEM132EQ6IEE7 984 aa13.26□□□□□ -0.29
AC055716.1-201ENST00000550077 KRT28Q7Z3Y7 464 aa13.26□□□□□ -0.29
AC055716.1-201ENST00000550077 NRAPQ86VF7 1730 aa13.26□□□□□ -0.29
AC055716.1-201ENST00000550077 NWD2Q9ULI1 1742 aa13.26□□□□□ -0.29
AC055716.1-201ENST00000550077 IFT172Q9UG01 1749 aa13.25□□□□□ -0.29
AC055716.1-201ENST00000550077 FAM83GA6ND36 823 aa13.24□□□□□ -0.29
AC055716.1-201ENST00000550077 R3HDM1Q15032 1099 aaKnown RBP13.24□□□□□ -0.29
AC055716.1-201ENST00000550077 CCDC9Q9Y3X0 531 aaKnown RBP13.24□□□□□ -0.29
AC055716.1-201ENST00000550077 TNS1Q9HBL0 1735 aaKnown RBP13.24□□□□□ -0.29
AC055716.1-201ENST00000550077 KIF1AQ12756 1690 aa13.24□□□□□ -0.29
AC055716.1-201ENST00000550077 KNDC1Q76NI1 1749 aa13.22□□□□□ -0.29
AC055716.1-201ENST00000550077 LRPPRCP42704 1394 aaKnown RBP13.22□□□□□ -0.29
AC055716.1-201ENST00000550077 FAM98CQ17RN3 349 aaKnown RBP13.22□□□□□ -0.29
AC055716.1-201ENST00000550077 RGPD1P0DJD0 1748 aa13.22□□□□□ -0.29
AC055716.1-201ENST00000550077 TECPR2O15040 1411 aa13.22□□□□□ -0.29
AC055716.1-201ENST00000550077 RPGRIP1LQ68CZ1 1315 aa13.21□□□□□ -0.29
AC055716.1-201ENST00000550077 BAG6P46379 1132 aa13.21□□□□□ -0.29
AC055716.1-201ENST00000550077 CCDC144AA2RUR9 1427 aa13.21□□□□□ -0.3
AC055716.1-201ENST00000550077 TNS3Q68CZ2 1445 aa13.21□□□□□ -0.3
AC055716.1-201ENST00000550077 A0A0G2JS52 829 aa13.19□□□□□ -0.3
AC055716.1-201ENST00000550077 HAP1P54257 671 aaPredicted RBP13.19□□□□□ -0.3
AC055716.1-201ENST00000550077 MYT1Q01538 1121 aa13.19□□□□□ -0.3
AC055716.1-201ENST00000550077 EZH2Q15910 746 aaKnown RBP13.19□□□□□ -0.3
AC055716.1-201ENST00000550077 RGL3Q3MIN7 710 aa13.19□□□□□ -0.3
AC055716.1-201ENST00000550077 LMOD2Q6P5Q4 547 aa13.19□□□□□ -0.3
AC055716.1-201ENST00000550077 PHF8Q9UPP1 1060 aa13.18□□□□□ -0.3
AC055716.1-201ENST00000550077 RRBP1Q9P2E9 1410 aaKnown RBP13.18□□□□□ -0.3
AC055716.1-201ENST00000550077 TRPM3Q9HCF6 1732 aaPredicted RBP13.18□□□□□ -0.3
AC055716.1-201ENST00000550077 ABCC11Q96J66 1382 aa13.18□□□□□ -0.3
AC055716.1-201ENST00000550077 BTG4Q9NY30 223 aa13.17□□□□□ -0.3
AC055716.1-201ENST00000550077 CRYBG1Q9Y4K1 1723 aa13.16□□□□□ -0.3
AC055716.1-201ENST00000550077 YTHDC2Q9H6S0 1430 aaKnown RBP13.16□□□□□ -0.3
AC055716.1-201ENST00000550077 THSD7AQ9UPZ6 1657 aa13.16□□□□□ -0.3
AC055716.1-201ENST00000550077 PMFBP1Q8TBY8 1022 aa13.16□□□□□ -0.3
AC055716.1-201ENST00000550077 NRXN1Q9ULB1 1477 aa13.16□□□□□ -0.3
AC055716.1-201ENST00000550077 ALS2Q96Q42 1657 aa13.15□□□□□ -0.3
AC055716.1-201ENST00000550077 SPATA31E1Q6ZUB1 1445 aa13.15□□□□□ -0.3
AC055716.1-201ENST00000550077 SAFB2Q14151 953 aaKnown RBP eCLIP13.15□□□□□ -0.3
AC055716.1-201ENST00000550077 SLC4A1APQ9BWU0 796 aaKnown RBP13.15□□□□□ -0.3
AC055716.1-201ENST00000550077 CAMKK2Q96RR4 588 aa13.14□□□□□ -0.31
AC055716.1-201ENST00000550077 SBNO1A3KN83 1393 aa13.14□□□□□ -0.31
AC055716.1-201ENST00000550077 COL14A1Q05707 1796 aaKnown RBP13.14□□□□□ -0.31
AC055716.1-201ENST00000550077 PIK3C2GO75747 1445 aa13.13□□□□□ -0.31
AC055716.1-201ENST00000550077 PSME1Q06323 249 aa13.13□□□□□ -0.31
AC055716.1-201ENST00000550077 NUP188Q5SRE5 1749 aa13.13□□□□□ -0.31
AC055716.1-201ENST00000550077 RREB1Q92766 1687 aa13.12□□□□□ -0.31
AC055716.1-201ENST00000550077 CAMTA1Q9Y6Y1 1673 aa13.12□□□□□ -0.31
AC055716.1-201ENST00000550077 TRIM37O94972 964 aa13.12□□□□□ -0.31
AC055716.1-201ENST00000550077 YY1P25490 414 aa13.12□□□□□ -0.31
AC055716.1-201ENST00000550077 DISP2A7MBM2 1401 aa13.12□□□□□ -0.31
AC055716.1-201ENST00000550077 SPATA31A5Q5VU36 1347 aa13.12□□□□□ -0.31
AC055716.1-201ENST00000550077 SPATA31A7Q8IWB4 1347 aa13.12□□□□□ -0.31
AC055716.1-201ENST00000550077 ARHGEF10O15013 1369 aa13.1□□□□□ -0.31
AC055716.1-201ENST00000550077 CFAP70Q5T0N1 1121 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms