RNA–Protein interactions for RNA: ENST00000550077.1

AC055716.1-201, humanhuman

BASIC

Gene AC055716.1, Length 495 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.1-201ENST00000550077 NISCHQ9Y2I1 1504 aa22.46■■□□□ 1.19
AC055716.1-201ENST00000550077 ABCC9O60706 1549 aa20.79■□□□□ 0.92
AC055716.1-201ENST00000550077 CCDC180Q9P1Z9 1646 aa20.29■□□□□ 0.84
AC055716.1-201ENST00000550077 DNAJC5BQ9UF47 199 aa19.98■□□□□ 0.79
AC055716.1-201ENST00000550077 RB1CC1Q8TDY2 1594 aa19.49■□□□□ 0.71
AC055716.1-201ENST00000550077 PABPN1Q86U42 306 aaKnown RBP eCLIP19.32■□□□□ 0.68
AC055716.1-201ENST00000550077 UNC13AQ9UPW8 1703 aa19.25■□□□□ 0.67
AC055716.1-201ENST00000550077 NACADO15069 1562 aa19.25■□□□□ 0.67
AC055716.1-201ENST00000550077 DCAF8L2P0C7V8 631 aa19.17■□□□□ 0.66
AC055716.1-201ENST00000550077 BICRAQ9NZM4 1560 aa19.09■□□□□ 0.65
AC055716.1-201ENST00000550077 MYO15BQ96JP2 1530 aa18.79■□□□□ 0.6
AC055716.1-201ENST00000550077 CC2D2AQ9P2K1 1620 aa18.75■□□□□ 0.59
AC055716.1-201ENST00000550077 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
AC055716.1-201ENST00000550077 EIF4G1Q04637 1599 aaKnown RBP18.58■□□□□ 0.56
AC055716.1-201ENST00000550077 SCRIBQ14160 1630 aa18.56■□□□□ 0.56
AC055716.1-201ENST00000550077 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.55
AC055716.1-201ENST00000550077 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.55
AC055716.1-201ENST00000550077 DNAJC5Q9H3Z4 198 aa18.49■□□□□ 0.55
AC055716.1-201ENST00000550077 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
AC055716.1-201ENST00000550077 CUX2O14529 1486 aa17.95■□□□□ 0.46
AC055716.1-201ENST00000550077 ERCC6Q03468 1493 aa17.87■□□□□ 0.45
AC055716.1-201ENST00000550077 NCAPD3P42695 1498 aa17.8■□□□□ 0.44
AC055716.1-201ENST00000550077 NESP48681 1621 aa17.8■□□□□ 0.44
AC055716.1-201ENST00000550077 ATAD2BQ9ULI0 1458 aa17.73■□□□□ 0.43
AC055716.1-201ENST00000550077 THOC2Q8NI27 1593 aaKnown RBP17.64■□□□□ 0.41
AC055716.1-201ENST00000550077 SMARCA4P51532 1647 aa17.63■□□□□ 0.41
AC055716.1-201ENST00000550077 HMGXB3Q12766 1538 aa17.62■□□□□ 0.41
AC055716.1-201ENST00000550077 SMARCA2P51531 1590 aa17.57■□□□□ 0.4
AC055716.1-201ENST00000550077 TRIM41Q8WV44 630 aa17.56■□□□□ 0.4
AC055716.1-201ENST00000550077 KIF21AQ7Z4S6 1674 aa17.55■□□□□ 0.4
AC055716.1-201ENST00000550077 BAZ1BQ9UIG0 1483 aaKnown RBP17.5■□□□□ 0.39
AC055716.1-201ENST00000550077 LAMC3Q9Y6N6 1575 aa17.45■□□□□ 0.38
AC055716.1-201ENST00000550077 PEG3Q9GZU2 1588 aa17.4■□□□□ 0.38
AC055716.1-201ENST00000550077 BAZ1AQ9NRL2 1556 aaPredicted RBP17.4■□□□□ 0.38
AC055716.1-201ENST00000550077 MROH2BQ7Z745 1585 aa17.37■□□□□ 0.37
AC055716.1-201ENST00000550077 PDS5BQ9NTI5 1447 aa17.32■□□□□ 0.36
AC055716.1-201ENST00000550077 MRC2Q9UBG0 1479 aa17.25■□□□□ 0.35
AC055716.1-201ENST00000550077 WDR62O43379 1518 aa17.24■□□□□ 0.35
AC055716.1-201ENST00000550077 CADPSQ9ULU8 1353 aa17.24■□□□□ 0.35
AC055716.1-201ENST00000550077 WIZO95785 1651 aa17.18■□□□□ 0.34
AC055716.1-201ENST00000550077 OSCARQ8IYS5 282 aa17.09■□□□□ 0.33
AC055716.1-201ENST00000550077 CEP164Q9UPV0 1460 aa17.09■□□□□ 0.33
AC055716.1-201ENST00000550077 FANCD2Q9BXW9 1451 aa17.07■□□□□ 0.32
AC055716.1-201ENST00000550077 URB2Q14146 1524 aaKnown RBP17.02■□□□□ 0.32
AC055716.1-201ENST00000550077 RIMBP3CA6NJZ7 1639 aa17.02■□□□□ 0.31
AC055716.1-201ENST00000550077 RIMBP3BA6NNM3 1639 aa17.02■□□□□ 0.31
AC055716.1-201ENST00000550077 RIMBP3Q9UFD9 1639 aa17.02■□□□□ 0.31
AC055716.1-201ENST00000550077 CFTRP13569 1480 aa16.97■□□□□ 0.31
AC055716.1-201ENST00000550077 ZNF608Q9ULD9 1512 aaPredicted RBP16.9■□□□□ 0.3
AC055716.1-201ENST00000550077 ARHGEF11O15085 1522 aa16.88■□□□□ 0.29
AC055716.1-201ENST00000550077 PRDM2Q13029 1718 aa16.82■□□□□ 0.28
AC055716.1-201ENST00000550077 TOP2AP11388 1531 aaKnown RBP16.81■□□□□ 0.28
AC055716.1-201ENST00000550077 RSF1Q96T23 1441 aaPredicted RBP16.81■□□□□ 0.28
AC055716.1-201ENST00000550077 CYB5RLQ6IPT4 315 aa16.79■□□□□ 0.28
AC055716.1-201ENST00000550077 CHD1O14646 1710 aa16.75■□□□□ 0.27
AC055716.1-201ENST00000550077 IFT140Q96RY7 1462 aa16.74■□□□□ 0.27
AC055716.1-201ENST00000550077 EIF4G3O43432 1585 aaKnown RBP16.74■□□□□ 0.27
AC055716.1-201ENST00000550077 TOPBP1Q92547 1522 aa16.72■□□□□ 0.27
AC055716.1-201ENST00000550077 ARAP1Q96P48 1450 aa16.71■□□□□ 0.27
AC055716.1-201ENST00000550077 TRHP20396 242 aaPredicted RBP16.7■□□□□ 0.26
AC055716.1-201ENST00000550077 CCDC88BA6NC98 1476 aa16.68■□□□□ 0.26
AC055716.1-201ENST00000550077 AQRO60306 1485 aaKnown RBP eCLIP16.67■□□□□ 0.26
AC055716.1-201ENST00000550077 TARBP1Q13395 1621 aaKnown RBP16.64■□□□□ 0.25
AC055716.1-201ENST00000550077 DNMBPQ6XZF7 1577 aa16.6■□□□□ 0.25
AC055716.1-201ENST00000550077 FBLN2P98095 1184 aa16.59■□□□□ 0.25
AC055716.1-201ENST00000550077 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
AC055716.1-201ENST00000550077 POLA1P09884 1462 aaPredicted RBP16.53■□□□□ 0.24
AC055716.1-201ENST00000550077 ABCC8Q09428 1581 aa16.52■□□□□ 0.24
AC055716.1-201ENST00000550077 TDRD9Q8NDG6 1382 aaKnown RBP16.5■□□□□ 0.23
AC055716.1-201ENST00000550077 CLASP1Q7Z460 1538 aa16.48■□□□□ 0.23
AC055716.1-201ENST00000550077 AEBP2Q6ZN18 517 aaPredicted RBP16.45■□□□□ 0.22
AC055716.1-201ENST00000550077 SNAPC4Q5SXM2 1469 aa16.45■□□□□ 0.22
AC055716.1-201ENST00000550077 SOGA1O94964 1423 aa16.42■□□□□ 0.22
AC055716.1-201ENST00000550077 FGD5Q6ZNL6 1462 aa16.37■□□□□ 0.21
AC055716.1-201ENST00000550077 SYNJ1O43426 1573 aa16.36■□□□□ 0.21
AC055716.1-201ENST00000550077 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
AC055716.1-201ENST00000550077 CUX1P39880 1505 aa16.33■□□□□ 0.2
AC055716.1-201ENST00000550077 WDR97A6NE52 1622 aa16.31■□□□□ 0.2
AC055716.1-201ENST00000550077 ERCC6L2Q5T890 1561 aa16.31■□□□□ 0.2
AC055716.1-201ENST00000550077 GAPVD1Q14C86 1478 aa16.3■□□□□ 0.2
AC055716.1-201ENST00000550077 MAGI1Q96QZ7 1491 aaPredicted RBP16.3■□□□□ 0.2
AC055716.1-201ENST00000550077 PBRM1Q86U86 1689 aa16.3■□□□□ 0.2
AC055716.1-201ENST00000550077 SYNJ2O15056 1496 aa16.29■□□□□ 0.2
AC055716.1-201ENST00000550077 GRIN2BQ13224 1484 aa16.29■□□□□ 0.2
AC055716.1-201ENST00000550077 ABCA5Q8WWZ7 1642 aa16.18■□□□□ 0.18
AC055716.1-201ENST00000550077 KIF13AQ9H1H9 1805 aa16.17■□□□□ 0.18
AC055716.1-201ENST00000550077 CEP170Q5SW79 1584 aa16.14■□□□□ 0.17
AC055716.1-201ENST00000550077 GRIN2AQ12879 1464 aa16.11■□□□□ 0.17
AC055716.1-201ENST00000550077 ABCA10Q8WWZ4 1543 aa16.11■□□□□ 0.17
AC055716.1-201ENST00000550077 SHROOM2Q13796 1616 aa16.08■□□□□ 0.17
AC055716.1-201ENST00000550077 NUP160Q12769 1436 aa16.07■□□□□ 0.16
AC055716.1-201ENST00000550077 ADAMTS12P58397 1594 aa16.07■□□□□ 0.16
AC055716.1-201ENST00000550077 PRG4Q92954 1404 aaPredicted RBP15.96■□□□□ 0.15
AC055716.1-201ENST00000550077 KDM4FA0A1W2PPD8 638 aa15.96■□□□□ 0.15
AC055716.1-201ENST00000550077 FHAD1B1AJZ9 1412 aa15.94■□□□□ 0.14
AC055716.1-201ENST00000550077 FAM69CQ0P6D2 419 aa15.93■□□□□ 0.14
AC055716.1-201ENST00000550077 BIVM-ERCC5R4GMW8 1640 aa15.93■□□□□ 0.14
AC055716.1-201ENST00000550077 WRNQ14191 1432 aaPredicted RBP eCLIP15.93■□□□□ 0.14
AC055716.1-201ENST00000550077 ABCC10Q5T3U5 1492 aa15.91■□□□□ 0.14
AC055716.1-201ENST00000550077 JPH4Q96JJ6 628 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms