RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 NLRP1Q9C000 1473 aa25.65■■□□□ 1.7
BRF1-215ENST00000549655 FER1L4A9Z1Z3 1794 aa25.65■■□□□ 1.7
BRF1-215ENST00000549655 C3P01024 1663 aa25.65■■□□□ 1.7
BRF1-215ENST00000549655 SMG6Q86US8 1419 aaKnown RBP25.65■■□□□ 1.7
BRF1-215ENST00000549655 ANKRD36BQ8N2N9 1353 aa25.64■■□□□ 1.69
BRF1-215ENST00000549655 BLMP54132 1417 aaPredicted RBP25.63■■□□□ 1.69
BRF1-215ENST00000549655 ABCC11Q96J66 1382 aa25.63■■□□□ 1.69
BRF1-215ENST00000549655 METP08581 1390 aa25.61■■□□□ 1.69
BRF1-215ENST00000549655 NINLQ9Y2I6 1382 aa25.61■■□□□ 1.69
BRF1-215ENST00000549655 USP32Q8NFA0 1604 aa25.61■■□□□ 1.69
BRF1-215ENST00000549655 ATAD2Q6PL18 1390 aa25.61■■□□□ 1.69
BRF1-215ENST00000549655 NUDCQ9Y266 331 aa25.6■■□□□ 1.69
BRF1-215ENST00000549655 WAPLQ7Z5K2 1190 aa25.6■■□□□ 1.69
BRF1-215ENST00000549655 ADAMTS8Q9UP79 889 aa25.6■■□□□ 1.69
BRF1-215ENST00000549655 BCANQ96GW7 911 aa25.59■■□□□ 1.69
BRF1-215ENST00000549655 CGNL1Q0VF96 1302 aa25.59■■□□□ 1.69
BRF1-215ENST00000549655 WDR43Q15061 677 aaKnown RBP eCLIP25.58■■□□□ 1.69
BRF1-215ENST00000549655 PLPPR3Q6T4P5 718 aa25.58■■□□□ 1.69
BRF1-215ENST00000549655 CDK19Q9BWU1 502 aa25.58■■□□□ 1.69
BRF1-215ENST00000549655 PLEKHH1Q9ULM0 1364 aa25.57■■□□□ 1.68
BRF1-215ENST00000549655 MORC1Q86VD1 984 aa25.57■■□□□ 1.68
BRF1-215ENST00000549655 SALL2Q9Y467 1007 aaPredicted RBP25.56■■□□□ 1.68
BRF1-215ENST00000549655 LTKP29376 864 aa25.55■■□□□ 1.68
BRF1-215ENST00000549655 A0A1W2PP64 1363 aa25.54■■□□□ 1.68
BRF1-215ENST00000549655 DNAJC5Q9H3Z4 198 aa25.54■■□□□ 1.68
BRF1-215ENST00000549655 TXNDC2Q86VQ3 553 aa25.52■■□□□ 1.68
BRF1-215ENST00000549655 PLEKHG1Q9ULL1 1385 aa25.52■■□□□ 1.68
BRF1-215ENST00000549655 KNDC1Q76NI1 1749 aa25.51■■□□□ 1.67
BRF1-215ENST00000549655 ADAMTS13Q76LX8 1427 aa25.51■■□□□ 1.67
BRF1-215ENST00000549655 NSD2O96028 1365 aa25.51■■□□□ 1.67
BRF1-215ENST00000549655 IRX6P78412 446 aaPredicted RBP25.51■■□□□ 1.67
BRF1-215ENST00000549655 TERF2IPQ9NYB0 399 aa25.51■■□□□ 1.67
BRF1-215ENST00000549655 TECPR2O15040 1411 aa25.51■■□□□ 1.67
BRF1-215ENST00000549655 TNNT2P45379 298 aaPredicted RBP25.5■■□□□ 1.67
BRF1-215ENST00000549655 SIRT1Q96EB6 747 aa25.5■■□□□ 1.67
BRF1-215ENST00000549655 PDE3BQ13370 1112 aa25.49■■□□□ 1.67
BRF1-215ENST00000549655 EID1Q9Y6B2 187 aa25.49■■□□□ 1.67
BRF1-215ENST00000549655 CD163L1Q9NR16 1453 aa25.49■■□□□ 1.67
BRF1-215ENST00000549655 FAM135BQ49AJ0 1406 aa25.49■■□□□ 1.67
BRF1-215ENST00000549655 POLR3AO14802 1390 aaPredicted RBP25.48■■□□□ 1.67
BRF1-215ENST00000549655 SLIT1O75093 1534 aa25.48■■□□□ 1.67
BRF1-215ENST00000549655 CPS1P31327 1500 aa25.47■■□□□ 1.67
BRF1-215ENST00000549655 ARHGAP23Q9P227 1491 aa25.47■■□□□ 1.67
BRF1-215ENST00000549655 CABP1Q9NZU7 370 aa25.47■■□□□ 1.67
BRF1-215ENST00000549655 HDGFL2Q7Z4V5 671 aaPredicted RBP25.45■■□□□ 1.67
BRF1-215ENST00000549655 THEMISQ8N1K5 641 aaPredicted RBP25.45■■□□□ 1.66
BRF1-215ENST00000549655 WASLO00401 505 aaPredicted RBP25.44■■□□□ 1.66
BRF1-215ENST00000549655 MED14O60244 1454 aa25.42■■□□□ 1.66
BRF1-215ENST00000549655 ERICH6BQ5W0A0 696 aa25.42■■□□□ 1.66
BRF1-215ENST00000549655 SLC26A8Q96RN1 970 aa25.41■■□□□ 1.66
BRF1-215ENST00000549655 RIMS1Q86UR5 1692 aaKnown RBP25.41■■□□□ 1.66
BRF1-215ENST00000549655 ROBO2Q9HCK4 1378 aa25.41■■□□□ 1.66
BRF1-215ENST00000549655 MTHFSP49914 203 aa25.4■■□□□ 1.66
BRF1-215ENST00000549655 CDCA7LQ96GN5 454 aa25.4■■□□□ 1.66
BRF1-215ENST00000549655 PELP1Q8IZL8 1130 aaKnown RBP25.4■■□□□ 1.66
BRF1-215ENST00000549655 RNF123Q5XPI4 1314 aa25.4■■□□□ 1.66
BRF1-215ENST00000549655 FYB1O15117 783 aa25.39■■□□□ 1.66
BRF1-215ENST00000549655 GGNBP2Q9H3C7 697 aa25.39■■□□□ 1.66
BRF1-215ENST00000549655 ATP7BP35670 1465 aa25.39■■□□□ 1.65
BRF1-215ENST00000549655 CCDC146Q8IYE0 955 aa25.38■■□□□ 1.65
BRF1-215ENST00000549655 SHPRHQ149N8 1683 aa25.36■■□□□ 1.65
BRF1-215ENST00000549655 CFAP53Q96M91 514 aa25.36■■□□□ 1.65
BRF1-215ENST00000549655 PTPRUQ92729 1446 aa25.35■■□□□ 1.65
BRF1-215ENST00000549655 ANKRD26Q9UPS8 1709 aa25.35■■□□□ 1.65
BRF1-215ENST00000549655 TBX22Q9Y458 520 aa25.35■■□□□ 1.65
BRF1-215ENST00000549655 PPIP5K1Q6PFW1 1433 aa25.35■■□□□ 1.65
BRF1-215ENST00000549655 NUDT16Q96DE0 195 aaKnown RBP25.35■■□□□ 1.65
BRF1-215ENST00000549655 CEP170BQ9Y4F5 1589 aaPredicted RBP25.34■■□□□ 1.65
BRF1-215ENST00000549655 ZNF521Q96K83 1311 aa25.32■■□□□ 1.64
BRF1-215ENST00000549655 APAF1O14727 1248 aa25.32■■□□□ 1.64
BRF1-215ENST00000549655 ADAMTSL3P82987 1691 aa25.32■■□□□ 1.64
BRF1-215ENST00000549655 KIF20BQ96Q89 1820 aa25.32■■□□□ 1.64
BRF1-215ENST00000549655 RCAN3Q9UKA8 241 aa25.31■■□□□ 1.64
BRF1-215ENST00000549655 CCDC61Q9Y6R9 512 aa25.31■■□□□ 1.64
BRF1-215ENST00000549655 AMOTL2Q9Y2J4 779 aa25.31■■□□□ 1.64
BRF1-215ENST00000549655 CPSF1Q10570 1443 aaKnown RBP25.31■■□□□ 1.64
BRF1-215ENST00000549655 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.3■■□□□ 1.64
BRF1-215ENST00000549655 ADGRB2O60241 1585 aa25.29■■□□□ 1.64
BRF1-215ENST00000549655 DIP2AQ14689 1571 aa25.29■■□□□ 1.64
BRF1-215ENST00000549655 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.29■■□□□ 1.64
BRF1-215ENST00000549655 PPP4R2Q9NY27 417 aa25.29■■□□□ 1.64
BRF1-215ENST00000549655 NCKAP5LQ9HCH0 1330 aa25.28■■□□□ 1.64
BRF1-215ENST00000549655 PRR36Q9H6K5 1346 aa25.26■■□□□ 1.63
BRF1-215ENST00000549655 CDC42BPGQ6DT37 1551 aa25.26■■□□□ 1.63
BRF1-215ENST00000549655 GOLGA2Q08379 1002 aa25.26■■□□□ 1.63
BRF1-215ENST00000549655 EDC4Q6P2E9 1401 aaKnown RBP25.26■■□□□ 1.63
BRF1-215ENST00000549655 NGEFQ8N5V2 710 aa25.25■■□□□ 1.63
BRF1-215ENST00000549655 PTCH1Q13635 1447 aa25.24■■□□□ 1.63
BRF1-215ENST00000549655 RUNDC1Q96C34 613 aa25.24■■□□□ 1.63
BRF1-215ENST00000549655 RRP1P56182 461 aaKnown RBP25.22■■□□□ 1.63
BRF1-215ENST00000549655 DUSP27Q5VZP5 1158 aa25.22■■□□□ 1.63
BRF1-215ENST00000549655 ZNF142P52746 1687 aaPredicted RBP25.21■■□□□ 1.63
BRF1-215ENST00000549655 MON2Q7Z3U7 1717 aa25.21■■□□□ 1.63
BRF1-215ENST00000549655 AKAP12Q02952 1782 aa25.2■■□□□ 1.63
BRF1-215ENST00000549655 SETD1BQ9UPS6 1966 aaKnown RBP25.2■■□□□ 1.62
BRF1-215ENST00000549655 ITSN1Q15811 1721 aa25.2■■□□□ 1.62
BRF1-215ENST00000549655 U2AF1L5P0DN76 240 aaPredicted RBP25.2■■□□□ 1.62
BRF1-215ENST00000549655 U2AF1Q01081 240 aaKnown RBP eCLIP25.2■■□□□ 1.62
BRF1-215ENST00000549655 SLFN5Q08AF3 891 aa25.2■■□□□ 1.62
BRF1-215ENST00000549655 ZNF692Q9BU19 519 aaPredicted RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms