RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 KTN1Q86UP2 1357 aaKnown RBP26.57■■□□□ 1.84
SKP2-208ENST00000546211 SRPK2P78362 688 aaKnown RBP26.57■■□□□ 1.84
SKP2-208ENST00000546211 CNGB1Q14028 1251 aaPredicted RBP26.57■■□□□ 1.84
SKP2-208ENST00000546211 PTPRUQ92729 1446 aa26.56■■□□□ 1.84
SKP2-208ENST00000546211 KDM4FA0A1W2PPD8 638 aa26.55■■□□□ 1.84
SKP2-208ENST00000546211 CABP2Q9NPB3 220 aa26.55■■□□□ 1.84
SKP2-208ENST00000546211 KNSTRNQ9Y448 316 aa26.55■■□□□ 1.84
SKP2-208ENST00000546211 PIK3R4Q99570 1358 aa26.55■■□□□ 1.84
SKP2-208ENST00000546211 TMC1Q8TDI8 760 aa26.54■■□□□ 1.84
SKP2-208ENST00000546211 YTHDC1Q96MU7 727 aaKnown RBP26.54■■□□□ 1.84
SKP2-208ENST00000546211 ROBO2Q9HCK4 1378 aa26.54■■□□□ 1.84
SKP2-208ENST00000546211 AMOTL2Q9Y2J4 779 aa26.54■■□□□ 1.84
SKP2-208ENST00000546211 ATAD2Q6PL18 1390 aa26.54■■□□□ 1.84
SKP2-208ENST00000546211 RALBP1Q15311 655 aa26.53■■□□□ 1.84
SKP2-208ENST00000546211 CDK19Q9BWU1 502 aa26.52■■□□□ 1.84
SKP2-208ENST00000546211 NPHP4O75161 1426 aaPredicted RBP26.52■■□□□ 1.84
SKP2-208ENST00000546211 NINLQ9Y2I6 1382 aa26.51■■□□□ 1.83
SKP2-208ENST00000546211 PTCH1Q13635 1447 aa26.5■■□□□ 1.83
SKP2-208ENST00000546211 SLC12A5Q9H2X9 1139 aa26.5■■□□□ 1.83
SKP2-208ENST00000546211 XRN1Q8IZH2 1706 aaKnown RBP26.48■■□□□ 1.83
SKP2-208ENST00000546211 PARD3Q8TEW0 1356 aa26.47■■□□□ 1.83
SKP2-208ENST00000546211 WASLO00401 505 aaPredicted RBP26.46■■□□□ 1.83
SKP2-208ENST00000546211 CC2D1BQ5T0F9 858 aaKnown RBP26.46■■□□□ 1.83
SKP2-208ENST00000546211 MYBBP1AQ9BQG0 1328 aaKnown RBP26.45■■□□□ 1.83
SKP2-208ENST00000546211 NCKAP5LQ9HCH0 1330 aa26.45■■□□□ 1.83
SKP2-208ENST00000546211 ANKRD36BQ8N2N9 1353 aa26.45■■□□□ 1.82
SKP2-208ENST00000546211 MRS2Q9HD23 443 aa26.44■■□□□ 1.82
SKP2-208ENST00000546211 NPC1L1Q9UHC9 1359 aa26.44■■□□□ 1.82
SKP2-208ENST00000546211 ADGRB2O60241 1585 aa26.44■■□□□ 1.82
SKP2-208ENST00000546211 AMER1Q5JTC6 1135 aaPredicted RBP26.43■■□□□ 1.82
SKP2-208ENST00000546211 CARD14Q9BXL6 1004 aa26.43■■□□□ 1.82
SKP2-208ENST00000546211 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.41■■□□□ 1.82
SKP2-208ENST00000546211 KCNA6P17658 529 aa26.41■■□□□ 1.82
SKP2-208ENST00000546211 NSD3Q9BZ95 1437 aa26.4■■□□□ 1.82
SKP2-208ENST00000546211 CHD2O14647 1828 aaKnown RBP26.39■■□□□ 1.82
SKP2-208ENST00000546211 CCDC184Q52MB2 194 aa26.39■■□□□ 1.82
SKP2-208ENST00000546211 TERF2IPQ9NYB0 399 aa26.39■■□□□ 1.82
SKP2-208ENST00000546211 CENPBP07199 599 aaPredicted RBP26.38■■□□□ 1.81
SKP2-208ENST00000546211 BRD4O60885 1362 aaPredicted RBP26.36■■□□□ 1.81
SKP2-208ENST00000546211 HDGFL2Q7Z4V5 671 aaPredicted RBP26.36■■□□□ 1.81
SKP2-208ENST00000546211 A0A1W2PP64 1363 aa26.36■■□□□ 1.81
SKP2-208ENST00000546211 USP32Q8NFA0 1604 aa26.35■■□□□ 1.81
SKP2-208ENST00000546211 NLRP13Q86W25 1043 aa26.35■■□□□ 1.81
SKP2-208ENST00000546211 CABP1Q9NZU7 370 aa26.35■■□□□ 1.81
SKP2-208ENST00000546211 NUDT16Q96DE0 195 aaKnown RBP26.34■■□□□ 1.81
SKP2-208ENST00000546211 ATP7BP35670 1465 aa26.33■■□□□ 1.81
SKP2-208ENST00000546211 LMTK3Q96Q04 1460 aa26.33■■□□□ 1.81
SKP2-208ENST00000546211 CGNL1Q0VF96 1302 aa26.33■■□□□ 1.81
SKP2-208ENST00000546211 HSPA2P54652 639 aa26.33■■□□□ 1.8
SKP2-208ENST00000546211 PPIP5K1Q6PFW1 1433 aa26.32■■□□□ 1.8
SKP2-208ENST00000546211 CD163L1Q9NR16 1453 aa26.32■■□□□ 1.8
SKP2-208ENST00000546211 CCDC61Q9Y6R9 512 aa26.31■■□□□ 1.8
SKP2-208ENST00000546211 NWD1Q149M9 1564 aa26.29■■□□□ 1.8
SKP2-208ENST00000546211 NSD2O96028 1365 aa26.29■■□□□ 1.8
SKP2-208ENST00000546211 FAM9BQ8IZU0 186 aa26.28■■□□□ 1.8
SKP2-208ENST00000546211 PRR36Q9H6K5 1346 aa26.27■■□□□ 1.8
SKP2-208ENST00000546211 PPP2R1AP30153 589 aa26.25■■□□□ 1.79
SKP2-208ENST00000546211 CDC42BPGQ6DT37 1551 aa26.25■■□□□ 1.79
SKP2-208ENST00000546211 MORC1Q86VD1 984 aa26.24■■□□□ 1.79
SKP2-208ENST00000546211 TOPAZ1Q8N9V7 1692 aa26.23■■□□□ 1.79
SKP2-208ENST00000546211 CPSF1Q10570 1443 aaKnown RBP26.23■■□□□ 1.79
SKP2-208ENST00000546211 NUTM2FA1L443 756 aa26.21■■□□□ 1.79
SKP2-208ENST00000546211 NKTRP30414 1462 aaKnown RBP26.21■■□□□ 1.79
SKP2-208ENST00000546211 PNISRQ8TF01 805 aaKnown RBP26.2■■□□□ 1.79
SKP2-208ENST00000546211 NALCNQ8IZF0 1738 aa26.2■■□□□ 1.78
SKP2-208ENST00000546211 ANKARQ7Z5J8 1434 aa26.2■■□□□ 1.78
SKP2-208ENST00000546211 ADGRL3Q9HAR2 1447 aa26.2■■□□□ 1.78
SKP2-208ENST00000546211 ZNF692Q9BU19 519 aaPredicted RBP26.2■■□□□ 1.78
SKP2-208ENST00000546211 ITSN1Q15811 1721 aa26.19■■□□□ 1.78
SKP2-208ENST00000546211 PLEKHG3A1L390 1219 aa26.19■■□□□ 1.78
SKP2-208ENST00000546211 EDC4Q6P2E9 1401 aaKnown RBP26.18■■□□□ 1.78
SKP2-208ENST00000546211 FMN2Q9NZ56 1722 aa26.18■■□□□ 1.78
SKP2-208ENST00000546211 C14orf37Q86TY3 774 aa26.16■■□□□ 1.78
SKP2-208ENST00000546211 PROSER2Q86WR7 435 aaPredicted RBP26.16■■□□□ 1.78
SKP2-208ENST00000546211 AKAP12Q02952 1782 aa26.16■■□□□ 1.78
SKP2-208ENST00000546211 RBM33Q96EV2 1170 aaKnown RBP26.16■■□□□ 1.78
SKP2-208ENST00000546211 STRCQ7RTU9 1775 aa26.16■■□□□ 1.78
SKP2-208ENST00000546211 FYB1O15117 783 aa26.15■■□□□ 1.78
SKP2-208ENST00000546211 MON2Q7Z3U7 1717 aa26.15■■□□□ 1.78
SKP2-208ENST00000546211 KIF20BQ96Q89 1820 aa26.14■■□□□ 1.78
SKP2-208ENST00000546211 HNRNPUQ00839 825 aaKnown RBP eCLIP26.14■■□□□ 1.78
SKP2-208ENST00000546211 GGNBP2Q9H3C7 697 aa26.14■■□□□ 1.78
SKP2-208ENST00000546211 ACEP12821 1306 aa26.13■■□□□ 1.77
SKP2-208ENST00000546211 ANKRD26Q9UPS8 1709 aa26.13■■□□□ 1.77
SKP2-208ENST00000546211 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.12■■□□□ 1.77
SKP2-208ENST00000546211 TNNT2P45379 298 aaPredicted RBP26.12■■□□□ 1.77
SKP2-208ENST00000546211 PMFBP1Q8TBY8 1022 aa26.08■■□□□ 1.77
SKP2-208ENST00000546211 RGPD8O14715 1765 aaPredicted RBP26.08■■□□□ 1.77
SKP2-208ENST00000546211 POLR3AO14802 1390 aaPredicted RBP26.08■■□□□ 1.77
SKP2-208ENST00000546211 USP6P35125 1406 aa26.08■■□□□ 1.76
SKP2-208ENST00000546211 NGDNQ8NEJ9 315 aaKnown RBP26.07■■□□□ 1.76
SKP2-208ENST00000546211 STRCP1A6NGW2 1772 aa26.06■■□□□ 1.76
SKP2-208ENST00000546211 NCOA3Q9Y6Q9 1424 aa26.06■■□□□ 1.76
SKP2-208ENST00000546211 NRKQ7Z2Y5 1582 aa26.06■■□□□ 1.76
SKP2-208ENST00000546211 WDR43Q15061 677 aaKnown RBP eCLIP26.04■■□□□ 1.76
SKP2-208ENST00000546211 TTC21BQ7Z4L5 1316 aa26.04■■□□□ 1.76
SKP2-208ENST00000546211 TMEM94Q12767 1356 aa26.04■■□□□ 1.76
SKP2-208ENST00000546211 NME9Q86XW9 330 aa26.03■■□□□ 1.76
SKP2-208ENST00000546211 C19orf44Q9H6X5 657 aa26.03■■□□□ 1.76
SKP2-208ENST00000546211 INSRP06213 1382 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms