RNA–Protein interactions for RNA: ENST00000546088.5

TAF1D-222, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit D, human

TSL 3

Gene TAF1D, Length 1,728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1D-222	ENST00000546088	MAP3K4	Q9Y6R4	1608 aa		10.17	□□□□□ -0.78
TAF1D-222	ENST00000546088	GLI2	P10070	1586 aa		10.17	□□□□□ -0.78
TAF1D-222	ENST00000546088	CD109	Q6YHK3	1445 aa		10.16	□□□□□ -0.78
TAF1D-222	ENST00000546088	VPS8	Q8N3P4	1428 aa		10.16	□□□□□ -0.78
TAF1D-222	ENST00000546088	NBR1	Q14596	966 aa		10.16	□□□□□ -0.78
TAF1D-222	ENST00000546088	KIF14	Q15058	1648 aa		10.16	□□□□□ -0.78
TAF1D-222	ENST00000546088	CDCA7L	Q96GN5	454 aa		10.16	□□□□□ -0.78
TAF1D-222	ENST00000546088	CDK11A	Q9UQ88	783 aa	Predicted RBP	10.16	□□□□□ -0.78
TAF1D-222	ENST00000546088	PDZRN3	Q9UPQ7	1066 aa		10.15	□□□□□ -0.78
TAF1D-222	ENST00000546088	TTC37	Q6PGP7	1564 aa		10.15	□□□□□ -0.78
TAF1D-222	ENST00000546088	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	10.15	□□□□□ -0.79
TAF1D-222	ENST00000546088	CCDC18	Q5T9S5	1454 aa		10.15	□□□□□ -0.79
TAF1D-222	ENST00000546088	SMAP	O00193	183 aa		10.14	□□□□□ -0.79
TAF1D-222	ENST00000546088	PRSS12	P56730	875 aa		10.14	□□□□□ -0.79
TAF1D-222	ENST00000546088	ZNF516	Q92618	1163 aa		10.14	□□□□□ -0.79
TAF1D-222	ENST00000546088	CFAP43	Q8NDM7	1665 aa		10.14	□□□□□ -0.79
TAF1D-222	ENST00000546088	FAM198A	Q9UFP1	575 aa		10.13	□□□□□ -0.79
TAF1D-222	ENST00000546088	TRO	Q12816	1431 aa	Predicted RBP	10.13	□□□□□ -0.79
TAF1D-222	ENST00000546088	ABCA9	Q8IUA7	1624 aa		10.13	□□□□□ -0.79
TAF1D-222	ENST00000546088	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.13	□□□□□ -0.79
TAF1D-222	ENST00000546088	CERK	Q8TCT0	537 aa		10.13	□□□□□ -0.79
TAF1D-222	ENST00000546088	MTUS2	Q5JR59	1369 aa		10.12	□□□□□ -0.79
TAF1D-222	ENST00000546088	PDIA6	Q15084	440 aa		10.11	□□□□□ -0.79
TAF1D-222	ENST00000546088	KANK4	Q5T7N3	995 aa	Predicted RBP	10.11	□□□□□ -0.79
TAF1D-222	ENST00000546088	TATDN2	Q93075	761 aa		10.11	□□□□□ -0.79
TAF1D-222	ENST00000546088	KDM6B	O15054	1643 aa		10.11	□□□□□ -0.79
TAF1D-222	ENST00000546088	NBPF26	B4DH59	902 aa		10.1	□□□□□ -0.79
TAF1D-222	ENST00000546088	ZNF775	Q96BV0	537 aa	Predicted RBP	10.1	□□□□□ -0.79
TAF1D-222	ENST00000546088	COL17A1	Q9UMD9	1497 aa	Predicted RBP	10.1	□□□□□ -0.79
TAF1D-222	ENST00000546088	TIAM1	Q13009	1591 aa		10.09	□□□□□ -0.79
TAF1D-222	ENST00000546088	C3orf80	F5H4A9	247 aa		10.09	□□□□□ -0.79
TAF1D-222	ENST00000546088	APLP1	P51693	650 aa		10.09	□□□□□ -0.79
TAF1D-222	ENST00000546088	PNMA3	Q9UL41	463 aa		10.09	□□□□□ -0.79
TAF1D-222	ENST00000546088	ZNF777	Q9ULD5	760 aa	Predicted RBP	10.09	□□□□□ -0.79
TAF1D-222	ENST00000546088	TEX14	Q8IWB6	1497 aa		10.09	□□□□□ -0.79
TAF1D-222	ENST00000546088	SPDYE16	A6NNV3	312 aa	Predicted RBP	10.08	□□□□□ -0.8
TAF1D-222	ENST00000546088	GGCX	P38435	758 aa		10.08	□□□□□ -0.8
TAF1D-222	ENST00000546088	MYO5C	Q9NQX4	1742 aa		10.08	□□□□□ -0.8
TAF1D-222	ENST00000546088	RAPGEF3	O95398	923 aa		10.07	□□□□□ -0.8
TAF1D-222	ENST00000546088	NKX2-3	Q8TAU0	364 aa		10.07	□□□□□ -0.8
TAF1D-222	ENST00000546088	HDGF	P51858	240 aa	Known RBP	10.07	□□□□□ -0.8
TAF1D-222	ENST00000546088	TMUB1	Q9BVT8	246 aa		10.07	□□□□□ -0.8
TAF1D-222	ENST00000546088	ARHGAP5	Q13017	1502 aa		10.07	□□□□□ -0.8
TAF1D-222	ENST00000546088	FANCA	O15360	1455 aa		10.06	□□□□□ -0.8
TAF1D-222	ENST00000546088	NECTIN2	Q92692	538 aa		10.06	□□□□□ -0.8
TAF1D-222	ENST00000546088	CDC42BPB	Q9Y5S2	1711 aa		10.06	□□□□□ -0.8
TAF1D-222	ENST00000546088	EHBP1L1	Q8N3D4	1523 aa		10.05	□□□□□ -0.8
TAF1D-222	ENST00000546088	PLCH2	O75038	1416 aa		10.05	□□□□□ -0.8
TAF1D-222	ENST00000546088	CDC42BPA	Q5VT25	1732 aa		10.05	□□□□□ -0.8
TAF1D-222	ENST00000546088	LRRC9	Q6ZRR7	1453 aa		10.05	□□□□□ -0.8
TAF1D-222	ENST00000546088	CCNB3	Q8WWL7	1395 aa		10.04	□□□□□ -0.8
TAF1D-222	ENST00000546088	AKNA	Q7Z591	1439 aa		10.04	□□□□□ -0.8
TAF1D-222	ENST00000546088	RNF40	O75150	1001 aa		10.04	□□□□□ -0.8
TAF1D-222	ENST00000546088	NCOA2	Q15596	1464 aa		10.03	□□□□□ -0.8
TAF1D-222	ENST00000546088	EFCAB2	Q5VUJ9	269 aa		10.03	□□□□□ -0.8
TAF1D-222	ENST00000546088	RBM27	Q9P2N5	1060 aa	Known RBP	10.03	□□□□□ -0.8
TAF1D-222	ENST00000546088	ZNF644	Q9H582	1327 aa	Predicted RBP	10.03	□□□□□ -0.8
TAF1D-222	ENST00000546088	PREX2	Q70Z35	1606 aa		10.03	□□□□□ -0.8
TAF1D-222	ENST00000546088	SUPT6H	Q7KZ85	1726 aa	Known RBP	10.02	□□□□□ -0.8
TAF1D-222	ENST00000546088	GPATCH8	Q9UKJ3	1502 aa	Known RBP	10.02	□□□□□ -0.8
TAF1D-222	ENST00000546088	PRIM1	P49642	420 aa	Known RBP	10.02	□□□□□ -0.8
TAF1D-222	ENST00000546088	NUDT18	Q6ZVK8	323 aa		10.02	□□□□□ -0.8
TAF1D-222	ENST00000546088	CFDP1	Q9UEE9	299 aa	Predicted RBP	10.02	□□□□□ -0.8
TAF1D-222	ENST00000546088	SCAPER	Q9BY12	1400 aa		10.02	□□□□□ -0.81
TAF1D-222	ENST00000546088	ADGRL1	O94910	1474 aa		10.02	□□□□□ -0.81
TAF1D-222	ENST00000546088	NEO1	Q92859	1461 aa		10.01	□□□□□ -0.81
TAF1D-222	ENST00000546088	HNRNPM	P52272	730 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
TAF1D-222	ENST00000546088	COPS2	P61201	443 aa		10	□□□□□ -0.81
TAF1D-222	ENST00000546088	TRIM67	Q6ZTA4	783 aa		10	□□□□□ -0.81
TAF1D-222	ENST00000546088	AFAP1	Q8N556	730 aa		10	□□□□□ -0.81
TAF1D-222	ENST00000546088	CFAP74	Q9C0B2	1584 aa		10	□□□□□ -0.81
TAF1D-222	ENST00000546088	DENND4B	O75064	1496 aa	Predicted RBP	9.99	□□□□□ -0.81
TAF1D-222	ENST00000546088	MAP3K1	Q13233	1512 aa		9.99	□□□□□ -0.81
TAF1D-222	ENST00000546088	ARAP3	Q8WWN8	1544 aa		9.99	□□□□□ -0.81
TAF1D-222	ENST00000546088	FRMPD1	Q5SYB0	1578 aa		9.99	□□□□□ -0.81
TAF1D-222	ENST00000546088	SAMD9L	Q8IVG5	1584 aa		9.99	□□□□□ -0.81
TAF1D-222	ENST00000546088	ARHGEF12	Q9NZN5	1544 aa		9.99	□□□□□ -0.81
TAF1D-222	ENST00000546088	ZPR1	O75312	459 aa		9.99	□□□□□ -0.81
TAF1D-222	ENST00000546088	SLF2	Q8IX21	1173 aa		9.99	□□□□□ -0.81
TAF1D-222	ENST00000546088	RICTOR	Q6R327	1708 aa		9.98	□□□□□ -0.81
TAF1D-222	ENST00000546088	ITSN2	Q9NZM3	1697 aa		9.98	□□□□□ -0.81
TAF1D-222	ENST00000546088	SYCP2	Q9BX26	1530 aa		9.97	□□□□□ -0.81
TAF1D-222	ENST00000546088	TRAPPC8	Q9Y2L5	1435 aa		9.97	□□□□□ -0.81
TAF1D-222	ENST00000546088	PHLDB1	Q86UU1	1377 aa		9.97	□□□□□ -0.81
TAF1D-222	ENST00000546088	DGAT1	O75907	488 aa		9.96	□□□□□ -0.81
TAF1D-222	ENST00000546088	SWT1	Q5T5J6	900 aa	Known RBP	9.96	□□□□□ -0.81
TAF1D-222	ENST00000546088	ABCC1	P33527	1531 aa		9.96	□□□□□ -0.81
TAF1D-222	ENST00000546088	GRXCR2	A6NFK2	248 aa		9.96	□□□□□ -0.82
TAF1D-222	ENST00000546088	SLC19A1	P41440	591 aa		9.96	□□□□□ -0.82
TAF1D-222	ENST00000546088	MYT1	Q01538	1121 aa		9.96	□□□□□ -0.82
TAF1D-222	ENST00000546088	TTC13	Q8NBP0	860 aa		9.96	□□□□□ -0.82
TAF1D-222	ENST00000546088	CDHR5	Q9HBB8	845 aa		9.96	□□□□□ -0.82
TAF1D-222	ENST00000546088	POGZ	Q7Z3K3	1410 aa		9.95	□□□□□ -0.82
TAF1D-222	ENST00000546088	PKDCC	Q504Y2	493 aa		9.95	□□□□□ -0.82
TAF1D-222	ENST00000546088	ARIH1	Q9Y4X5	557 aa	Predicted RBP	9.95	□□□□□ -0.82
TAF1D-222	ENST00000546088	YEATS2	Q9ULM3	1422 aa		9.95	□□□□□ -0.82
TAF1D-222	ENST00000546088	CAMSAP2	Q08AD1	1489 aa		9.94	□□□□□ -0.82
TAF1D-222	ENST00000546088	MYOM3	Q5VTT5	1437 aa		9.94	□□□□□ -0.82
TAF1D-222	ENST00000546088	RNF223	E7ERA6	249 aa		9.93	□□□□□ -0.82
TAF1D-222	ENST00000546088	OSBP	P22059	807 aa		9.93	□□□□□ -0.82

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