RNA–Protein interactions for RNA: ENST00000546026.1

CIT-218, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-218ENST00000546026 SAFB2Q14151 953 aaKnown RBP eCLIP13.89□□□□□ -0.19
CIT-218ENST00000546026 WAPLQ7Z5K2 1190 aa13.89□□□□□ -0.19
CIT-218ENST00000546026 MINK1Q8N4C8 1332 aaPredicted RBP13.89□□□□□ -0.19
CIT-218ENST00000546026 NPC1L1Q9UHC9 1359 aa13.88□□□□□ -0.19
CIT-218ENST00000546026 KNSTRNQ9Y448 316 aa13.88□□□□□ -0.19
CIT-218ENST00000546026 ATAD2Q6PL18 1390 aa13.87□□□□□ -0.19
CIT-218ENST00000546026 PLEKHH1Q9ULM0 1364 aa13.87□□□□□ -0.19
CIT-218ENST00000546026 CDK19Q9BWU1 502 aa13.87□□□□□ -0.19
CIT-218ENST00000546026 CABP2Q9NPB3 220 aa13.87□□□□□ -0.19
CIT-218ENST00000546026 AMOTL2Q9Y2J4 779 aa13.87□□□□□ -0.19
CIT-218ENST00000546026 PTPRUQ92729 1446 aa13.87□□□□□ -0.19
CIT-218ENST00000546026 SRPK2P78362 688 aaKnown RBP13.86□□□□□ -0.19
CIT-218ENST00000546026 PARD3Q8TEW0 1356 aa13.85□□□□□ -0.19
CIT-218ENST00000546026 KDM4FA0A1W2PPD8 638 aa13.85□□□□□ -0.19
CIT-218ENST00000546026 MYBBP1AQ9BQG0 1328 aaKnown RBP13.85□□□□□ -0.19
CIT-218ENST00000546026 ROBO2Q9HCK4 1378 aa13.84□□□□□ -0.19
CIT-218ENST00000546026 NPHP4O75161 1426 aaPredicted RBP13.84□□□□□ -0.19
CIT-218ENST00000546026 PTCH1Q13635 1447 aa13.84□□□□□ -0.19
CIT-218ENST00000546026 WASLO00401 505 aaPredicted RBP13.84□□□□□ -0.19
CIT-218ENST00000546026 AMER1Q5JTC6 1135 aaPredicted RBP13.84□□□□□ -0.19
CIT-218ENST00000546026 TMC1Q8TDI8 760 aa13.84□□□□□ -0.19
CIT-218ENST00000546026 SLC12A5Q9H2X9 1139 aa13.84□□□□□ -0.19
CIT-218ENST00000546026 CENPBP07199 599 aaPredicted RBP13.83□□□□□ -0.2
CIT-218ENST00000546026 CARD14Q9BXL6 1004 aa13.83□□□□□ -0.2
CIT-218ENST00000546026 XRN1Q8IZH2 1706 aaKnown RBP13.83□□□□□ -0.2
CIT-218ENST00000546026 ANKRD36BQ8N2N9 1353 aa13.83□□□□□ -0.2
CIT-218ENST00000546026 YTHDC1Q96MU7 727 aaKnown RBP13.82□□□□□ -0.2
CIT-218ENST00000546026 MRS2Q9HD23 443 aa13.82□□□□□ -0.2
CIT-218ENST00000546026 ADGRB2O60241 1585 aa13.82□□□□□ -0.2
CIT-218ENST00000546026 CC2D1BQ5T0F9 858 aaKnown RBP13.81□□□□□ -0.2
CIT-218ENST00000546026 BRD4O60885 1362 aaPredicted RBP13.81□□□□□ -0.2
CIT-218ENST00000546026 CHD2O14647 1828 aaKnown RBP13.8□□□□□ -0.2
CIT-218ENST00000546026 CCDC184Q52MB2 194 aa13.8□□□□□ -0.2
CIT-218ENST00000546026 TERF2IPQ9NYB0 399 aa13.8□□□□□ -0.2
CIT-218ENST00000546026 NCKAP5LQ9HCH0 1330 aa13.8□□□□□ -0.2
CIT-218ENST00000546026 USP32Q8NFA0 1604 aa13.79□□□□□ -0.2
CIT-218ENST00000546026 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.79□□□□□ -0.2
CIT-218ENST00000546026 CNGB1Q14028 1251 aaPredicted RBP13.79□□□□□ -0.2
CIT-218ENST00000546026 NLRP13Q86W25 1043 aa13.79□□□□□ -0.2
CIT-218ENST00000546026 HDGFL2Q7Z4V5 671 aaPredicted RBP13.78□□□□□ -0.2
CIT-218ENST00000546026 NSD3Q9BZ95 1437 aa13.78□□□□□ -0.2
CIT-218ENST00000546026 KCNA6P17658 529 aa13.77□□□□□ -0.21
CIT-218ENST00000546026 ATP7BP35670 1465 aa13.77□□□□□ -0.21
CIT-218ENST00000546026 CGNL1Q0VF96 1302 aa13.77□□□□□ -0.21
CIT-218ENST00000546026 NUDT16Q96DE0 195 aaKnown RBP13.77□□□□□ -0.21
CIT-218ENST00000546026 CABP1Q9NZU7 370 aa13.77□□□□□ -0.21
CIT-218ENST00000546026 CCDC61Q9Y6R9 512 aa13.77□□□□□ -0.21
CIT-218ENST00000546026 NSD2O96028 1365 aa13.76□□□□□ -0.21
CIT-218ENST00000546026 CD163L1Q9NR16 1453 aa13.75□□□□□ -0.21
CIT-218ENST00000546026 A0A1W2PP64 1363 aa13.75□□□□□ -0.21
CIT-218ENST00000546026 PPIP5K1Q6PFW1 1433 aa13.74□□□□□ -0.21
CIT-218ENST00000546026 PPP2R1AP30153 589 aa13.74□□□□□ -0.21
CIT-218ENST00000546026 PNISRQ8TF01 805 aaKnown RBP13.74□□□□□ -0.21
CIT-218ENST00000546026 PLEKHG3A1L390 1219 aa13.73□□□□□ -0.21
CIT-218ENST00000546026 ZNF692Q9BU19 519 aaPredicted RBP13.73□□□□□ -0.21
CIT-218ENST00000546026 NWD1Q149M9 1564 aa13.73□□□□□ -0.21
CIT-218ENST00000546026 CPSF1Q10570 1443 aaKnown RBP13.73□□□□□ -0.21
CIT-218ENST00000546026 PRR36Q9H6K5 1346 aa13.72□□□□□ -0.21
CIT-218ENST00000546026 MORC1Q86VD1 984 aa13.72□□□□□ -0.21
CIT-218ENST00000546026 FAM9BQ8IZU0 186 aa13.72□□□□□ -0.21
CIT-218ENST00000546026 LMTK3Q96Q04 1460 aa13.72□□□□□ -0.21
CIT-218ENST00000546026 ANKARQ7Z5J8 1434 aa13.71□□□□□ -0.22
CIT-218ENST00000546026 CDC42BPGQ6DT37 1551 aa13.71□□□□□ -0.22
CIT-218ENST00000546026 TOPAZ1Q8N9V7 1692 aa13.7□□□□□ -0.22
CIT-218ENST00000546026 HSPA2P54652 639 aa13.69□□□□□ -0.22
CIT-218ENST00000546026 EDC4Q6P2E9 1401 aaKnown RBP13.69□□□□□ -0.22
CIT-218ENST00000546026 INSRP06213 1382 aa13.69□□□□□ -0.22
CIT-218ENST00000546026 NKTRP30414 1462 aaKnown RBP13.68□□□□□ -0.22
CIT-218ENST00000546026 FYB1O15117 783 aa13.68□□□□□ -0.22
CIT-218ENST00000546026 AKAP12Q02952 1782 aa13.68□□□□□ -0.22
CIT-218ENST00000546026 ITSN1Q15811 1721 aa13.67□□□□□ -0.22
CIT-218ENST00000546026 FMN2Q9NZ56 1722 aa13.67□□□□□ -0.22
CIT-218ENST00000546026 ADGRL3Q9HAR2 1447 aa13.67□□□□□ -0.22
CIT-218ENST00000546026 MON2Q7Z3U7 1717 aa13.67□□□□□ -0.22
CIT-218ENST00000546026 ANKRD26Q9UPS8 1709 aa13.67□□□□□ -0.22
CIT-218ENST00000546026 NCOA3Q9Y6Q9 1424 aa13.66□□□□□ -0.22
CIT-218ENST00000546026 HNRNPUQ00839 825 aaKnown RBP eCLIP13.66□□□□□ -0.22
CIT-218ENST00000546026 PROSER2Q86WR7 435 aaPredicted RBP13.66□□□□□ -0.22
CIT-218ENST00000546026 NALCNQ8IZF0 1738 aa13.66□□□□□ -0.22
CIT-218ENST00000546026 ACEP12821 1306 aa13.65□□□□□ -0.22
CIT-218ENST00000546026 KIF20BQ96Q89 1820 aa13.65□□□□□ -0.22
CIT-218ENST00000546026 POLR3AO14802 1390 aaPredicted RBP13.65□□□□□ -0.22
CIT-218ENST00000546026 STRCQ7RTU9 1775 aa13.65□□□□□ -0.22
CIT-218ENST00000546026 GGNBP2Q9H3C7 697 aa13.64□□□□□ -0.23
CIT-218ENST00000546026 NUTM2FA1L443 756 aa13.63□□□□□ -0.23
CIT-218ENST00000546026 SCAF1Q9H7N4 1312 aaKnown RBP13.63□□□□□ -0.23
CIT-218ENST00000546026 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.62□□□□□ -0.23
CIT-218ENST00000546026 USP6P35125 1406 aa13.62□□□□□ -0.23
CIT-218ENST00000546026 TTC21BQ7Z4L5 1316 aa13.62□□□□□ -0.23
CIT-218ENST00000546026 RGPD8O14715 1765 aaPredicted RBP13.61□□□□□ -0.23
CIT-218ENST00000546026 WDR43Q15061 677 aaKnown RBP eCLIP13.61□□□□□ -0.23
CIT-218ENST00000546026 C14orf37Q86TY3 774 aa13.61□□□□□ -0.23
CIT-218ENST00000546026 NGDNQ8NEJ9 315 aaKnown RBP13.61□□□□□ -0.23
CIT-218ENST00000546026 CFAP53Q96M91 514 aa13.61□□□□□ -0.23
CIT-218ENST00000546026 C19orf44Q9H6X5 657 aa13.61□□□□□ -0.23
CIT-218ENST00000546026 DMRT2Q9Y5R5 561 aa13.61□□□□□ -0.23
CIT-218ENST00000546026 SSH2Q76I76 1423 aa13.61□□□□□ -0.23
CIT-218ENST00000546026 ZBED9Q6R2W3 1325 aa13.61□□□□□ -0.23
CIT-218ENST00000546026 TTC21AQ8NDW8 1320 aa13.61□□□□□ -0.23
CIT-218ENST00000546026 TNNT2P45379 298 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms