RNA–Protein interactions for RNA: ENST00000545595.6

CACNA2D4-217, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 1 (best)

Gene CACNA2D4, Length 1,615 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-217ENST00000545595 AMER1Q5JTC6 1135 aaPredicted RBP21.35■■□□□ 1.01
CACNA2D4-217ENST00000545595 PRAM1Q96QH2 718 aa21.35■■□□□ 1.01
CACNA2D4-217ENST00000545595 CC2D1BQ5T0F9 858 aaKnown RBP21.34■■□□□ 1.01
CACNA2D4-217ENST00000545595 SIRT1Q96EB6 747 aa21.34■■□□□ 1.01
CACNA2D4-217ENST00000545595 USP32Q8NFA0 1604 aa21.34■■□□□ 1.01
CACNA2D4-217ENST00000545595 DIP2AQ14689 1571 aa21.33■■□□□ 1
CACNA2D4-217ENST00000545595 SAFB2Q14151 953 aaKnown RBP eCLIP21.33■■□□□ 1
CACNA2D4-217ENST00000545595 FAM9BQ8IZU0 186 aa21.33■■□□□ 1
CACNA2D4-217ENST00000545595 NLRP13Q86W25 1043 aa21.32■■□□□ 1
CACNA2D4-217ENST00000545595 POGKQ9P215 609 aa21.31■■□□□ 1
CACNA2D4-217ENST00000545595 TBX22Q9Y458 520 aa21.31■■□□□ 1
CACNA2D4-217ENST00000545595 FAM135BQ49AJ0 1406 aa21.31■■□□□ 1
CACNA2D4-217ENST00000545595 HNRNPUQ00839 825 aaKnown RBP eCLIP21.3■■□□□ 1
CACNA2D4-217ENST00000545595 TMC1Q8TDI8 760 aa21.3■■□□□ 1
CACNA2D4-217ENST00000545595 CARD14Q9BXL6 1004 aa21.29■■□□□ 1
CACNA2D4-217ENST00000545595 MINK1Q8N4C8 1332 aaPredicted RBP21.29■■□□□ 1
CACNA2D4-217ENST00000545595 PLEKHH1Q9ULM0 1364 aa21.29■■□□□ 1
CACNA2D4-217ENST00000545595 PNISRQ8TF01 805 aaKnown RBP21.29■■□□□ 1
CACNA2D4-217ENST00000545595 NINLQ9Y2I6 1382 aa21.27■■□□□ 1
CACNA2D4-217ENST00000545595 ANKLE2Q86XL3 938 aa21.27■■□□□ 1
CACNA2D4-217ENST00000545595 BCANQ96GW7 911 aa21.27■■□□□ 1
CACNA2D4-217ENST00000545595 SLC12A5Q9H2X9 1139 aa21.27■■□□□ 1
CACNA2D4-217ENST00000545595 GTF3C3Q9Y5Q9 886 aa21.27■■□□□ 1
CACNA2D4-217ENST00000545595 NSD3Q9BZ95 1437 aa21.26■□□□□ 0.99
CACNA2D4-217ENST00000545595 CABP2Q9NPB3 220 aa21.26■□□□□ 0.99
CACNA2D4-217ENST00000545595 ATAD2Q6PL18 1390 aa21.26■□□□□ 0.99
CACNA2D4-217ENST00000545595 ANKRD36BQ8N2N9 1353 aa21.26■□□□□ 0.99
CACNA2D4-217ENST00000545595 PIK3R4Q99570 1358 aa21.24■□□□□ 0.99
CACNA2D4-217ENST00000545595 WAPLQ7Z5K2 1190 aa21.24■□□□□ 0.99
CACNA2D4-217ENST00000545595 SRPK2P78362 688 aaKnown RBP21.22■□□□□ 0.99
CACNA2D4-217ENST00000545595 SLC26A8Q96RN1 970 aa21.22■□□□□ 0.99
CACNA2D4-217ENST00000545595 ADGRB2O60241 1585 aa21.21■□□□□ 0.99
CACNA2D4-217ENST00000545595 PPP2R1AP30153 589 aa21.21■□□□□ 0.99
CACNA2D4-217ENST00000545595 PTPRUQ92729 1446 aa21.21■□□□□ 0.99
CACNA2D4-217ENST00000545595 CD163L1Q9NR16 1453 aa21.2■□□□□ 0.98
CACNA2D4-217ENST00000545595 ZBED9Q6R2W3 1325 aa21.2■□□□□ 0.98
CACNA2D4-217ENST00000545595 KDM4FA0A1W2PPD8 638 aa21.2■□□□□ 0.98
CACNA2D4-217ENST00000545595 ROBO2Q9HCK4 1378 aa21.19■□□□□ 0.98
CACNA2D4-217ENST00000545595 CDK19Q9BWU1 502 aa21.19■□□□□ 0.98
CACNA2D4-217ENST00000545595 XRN1Q8IZH2 1706 aaKnown RBP21.19■□□□□ 0.98
CACNA2D4-217ENST00000545595 PTCH1Q13635 1447 aa21.19■□□□□ 0.98
CACNA2D4-217ENST00000545595 A0A1W2PP64 1363 aa21.19■□□□□ 0.98
CACNA2D4-217ENST00000545595 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.19■□□□□ 0.98
CACNA2D4-217ENST00000545595 ANKRD26Q9UPS8 1709 aa21.17■□□□□ 0.98
CACNA2D4-217ENST00000545595 INSRP06213 1382 aa21.16■□□□□ 0.98
CACNA2D4-217ENST00000545595 NSD2O96028 1365 aa21.15■□□□□ 0.98
CACNA2D4-217ENST00000545595 AMOTL2Q9Y2J4 779 aa21.15■□□□□ 0.98
CACNA2D4-217ENST00000545595 NPHP4O75161 1426 aaPredicted RBP21.15■□□□□ 0.98
CACNA2D4-217ENST00000545595 ATP7BP35670 1465 aa21.14■□□□□ 0.97
CACNA2D4-217ENST00000545595 CGNL1Q0VF96 1302 aa21.14■□□□□ 0.97
CACNA2D4-217ENST00000545595 CHD2O14647 1828 aaKnown RBP21.13■□□□□ 0.97
CACNA2D4-217ENST00000545595 KIF20BQ96Q89 1820 aa21.13■□□□□ 0.97
CACNA2D4-217ENST00000545595 WASLO00401 505 aaPredicted RBP21.13■□□□□ 0.97
CACNA2D4-217ENST00000545595 BLMP54132 1417 aaPredicted RBP21.12■□□□□ 0.97
CACNA2D4-217ENST00000545595 TOPAZ1Q8N9V7 1692 aa21.11■□□□□ 0.97
CACNA2D4-217ENST00000545595 TERF2IPQ9NYB0 399 aa21.11■□□□□ 0.97
CACNA2D4-217ENST00000545595 CDC42BPGQ6DT37 1551 aa21.09■□□□□ 0.97
CACNA2D4-217ENST00000545595 AKAP12Q02952 1782 aa21.09■□□□□ 0.97
CACNA2D4-217ENST00000545595 ITSN1Q15811 1721 aa21.09■□□□□ 0.97
CACNA2D4-217ENST00000545595 MON2Q7Z3U7 1717 aa21.08■□□□□ 0.97
CACNA2D4-217ENST00000545595 PPIP5K1Q6PFW1 1433 aa21.07■□□□□ 0.96
CACNA2D4-217ENST00000545595 MORC1Q86VD1 984 aa21.07■□□□□ 0.96
CACNA2D4-217ENST00000545595 CABP1Q9NZU7 370 aa21.07■□□□□ 0.96
CACNA2D4-217ENST00000545595 HDGFL2Q7Z4V5 671 aaPredicted RBP21.07■□□□□ 0.96
CACNA2D4-217ENST00000545595 SHPRHQ149N8 1683 aa21.06■□□□□ 0.96
CACNA2D4-217ENST00000545595 CPSF1Q10570 1443 aaKnown RBP21.05■□□□□ 0.96
CACNA2D4-217ENST00000545595 NCKAP5LQ9HCH0 1330 aa21.05■□□□□ 0.96
CACNA2D4-217ENST00000545595 KCNA6P17658 529 aa21.04■□□□□ 0.96
CACNA2D4-217ENST00000545595 POLR3AO14802 1390 aaPredicted RBP21.04■□□□□ 0.96
CACNA2D4-217ENST00000545595 LMTK3Q96Q04 1460 aa21.04■□□□□ 0.96
CACNA2D4-217ENST00000545595 NWD1Q149M9 1564 aa21.03■□□□□ 0.96
CACNA2D4-217ENST00000545595 NUDT16Q96DE0 195 aaKnown RBP21.03■□□□□ 0.96
CACNA2D4-217ENST00000545595 PRR36Q9H6K5 1346 aa21.03■□□□□ 0.96
CACNA2D4-217ENST00000545595 CCDC61Q9Y6R9 512 aa21.01■□□□□ 0.95
CACNA2D4-217ENST00000545595 EDC4Q6P2E9 1401 aaKnown RBP21■□□□□ 0.95
CACNA2D4-217ENST00000545595 ADAMTS8Q9UP79 889 aa21■□□□□ 0.95
CACNA2D4-217ENST00000545595 NRKQ7Z2Y5 1582 aa21■□□□□ 0.95
CACNA2D4-217ENST00000545595 WDR43Q15061 677 aaKnown RBP eCLIP21■□□□□ 0.95
CACNA2D4-217ENST00000545595 SMG6Q86US8 1419 aaKnown RBP20.99■□□□□ 0.95
CACNA2D4-217ENST00000545595 FYB1O15117 783 aa20.99■□□□□ 0.95
CACNA2D4-217ENST00000545595 TNNT2P45379 298 aaPredicted RBP20.98■□□□□ 0.95
CACNA2D4-217ENST00000545595 NKTRP30414 1462 aaKnown RBP20.98■□□□□ 0.95
CACNA2D4-217ENST00000545595 GGNBP2Q9H3C7 697 aa20.97■□□□□ 0.95
CACNA2D4-217ENST00000545595 NALCNQ8IZF0 1738 aa20.97■□□□□ 0.95
CACNA2D4-217ENST00000545595 FMN2Q9NZ56 1722 aa20.97■□□□□ 0.95
CACNA2D4-217ENST00000545595 SENP3-EIF4A1A0A087X0R7 540 aa20.96■□□□□ 0.95
CACNA2D4-217ENST00000545595 RGPD8O14715 1765 aaPredicted RBP20.96■□□□□ 0.95
CACNA2D4-217ENST00000545595 ANKARQ7Z5J8 1434 aa20.93■□□□□ 0.94
CACNA2D4-217ENST00000545595 PLEKHG3A1L390 1219 aa20.93■□□□□ 0.94
CACNA2D4-217ENST00000545595 HSPA2P54652 639 aa20.93■□□□□ 0.94
CACNA2D4-217ENST00000545595 STRCQ7RTU9 1775 aa20.93■□□□□ 0.94
CACNA2D4-217ENST00000545595 MTHFSP49914 203 aa20.93■□□□□ 0.94
CACNA2D4-217ENST00000545595 ZNF692Q9BU19 519 aaPredicted RBP20.92■□□□□ 0.94
CACNA2D4-217ENST00000545595 NUDCQ9Y266 331 aa20.92■□□□□ 0.94
CACNA2D4-217ENST00000545595 COL3A1P02461 1466 aaPredicted RBP20.92■□□□□ 0.94
CACNA2D4-217ENST00000545595 ADGRL3Q9HAR2 1447 aa20.91■□□□□ 0.94
CACNA2D4-217ENST00000545595 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.9■□□□□ 0.94
CACNA2D4-217ENST00000545595 SUPT16HQ9Y5B9 1047 aaKnown RBP20.9■□□□□ 0.94
CACNA2D4-217ENST00000545595 CFAP53Q96M91 514 aa20.89■□□□□ 0.94
CACNA2D4-217ENST00000545595 MAP2P11137 1827 aaKnown RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms