RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 PRAG1Q86YV5 1406 aa17.51■□□□□ 0.39
TMEM258-208ENST00000545210 MYOM2P54296 1465 aa17.5■□□□□ 0.39
TMEM258-208ENST00000545210 CDC42BPGQ6DT37 1551 aa17.5■□□□□ 0.39
TMEM258-208ENST00000545210 ZRANB1Q9UGI0 708 aa17.5■□□□□ 0.39
TMEM258-208ENST00000545210 BCL9LQ86UU0 1499 aa17.5■□□□□ 0.39
TMEM258-208ENST00000545210 PXDNQ92626 1479 aa17.5■□□□□ 0.39
TMEM258-208ENST00000545210 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.5■□□□□ 0.39
TMEM258-208ENST00000545210 HFM1A2PYH4 1435 aa17.49■□□□□ 0.39
TMEM258-208ENST00000545210 BRWD3Q6RI45 1802 aa17.49■□□□□ 0.39
TMEM258-208ENST00000545210 ESCO1Q5FWF5 840 aa17.48■□□□□ 0.39
TMEM258-208ENST00000545210 FOXD1Q16676 465 aa17.47■□□□□ 0.39
TMEM258-208ENST00000545210 NPHP3Q7Z494 1330 aa17.47■□□□□ 0.39
TMEM258-208ENST00000545210 XPCQ01831 940 aaPredicted RBP17.46■□□□□ 0.39
TMEM258-208ENST00000545210 NAIPQ13075 1403 aa17.46■□□□□ 0.39
TMEM258-208ENST00000545210 RPGRIP1LQ68CZ1 1315 aa17.45■□□□□ 0.38
TMEM258-208ENST00000545210 RGPD8O14715 1765 aaPredicted RBP17.44■□□□□ 0.38
TMEM258-208ENST00000545210 FOXO3O43524 673 aa17.44■□□□□ 0.38
TMEM258-208ENST00000545210 CCDC125Q86Z20 511 aa17.44■□□□□ 0.38
TMEM258-208ENST00000545210 GJD4Q96KN9 370 aaPredicted RBP17.43■□□□□ 0.38
TMEM258-208ENST00000545210 GLI3P10071 1580 aa17.43■□□□□ 0.38
TMEM258-208ENST00000545210 FMN2Q9NZ56 1722 aa17.42■□□□□ 0.38
TMEM258-208ENST00000545210 IFT172Q9UG01 1749 aa17.42■□□□□ 0.38
TMEM258-208ENST00000545210 NUTM2FA1L443 756 aa17.41■□□□□ 0.38
TMEM258-208ENST00000545210 KIF1AQ12756 1690 aa17.41■□□□□ 0.38
TMEM258-208ENST00000545210 KNDC1Q76NI1 1749 aa17.41■□□□□ 0.38
TMEM258-208ENST00000545210 USP32Q8NFA0 1604 aa17.39■□□□□ 0.38
TMEM258-208ENST00000545210 RALGAPBQ86X10 1494 aa17.39■□□□□ 0.37
TMEM258-208ENST00000545210 LRPPRCP42704 1394 aaKnown RBP17.39■□□□□ 0.37
TMEM258-208ENST00000545210 PLCH1Q4KWH8 1693 aa17.39■□□□□ 0.37
TMEM258-208ENST00000545210 SLIT2O94813 1529 aa17.38■□□□□ 0.37
TMEM258-208ENST00000545210 WAPLQ7Z5K2 1190 aa17.38■□□□□ 0.37
TMEM258-208ENST00000545210 SLC4A1APQ9BWU0 796 aaKnown RBP17.38■□□□□ 0.37
TMEM258-208ENST00000545210 STK26Q9P289 416 aa17.38■□□□□ 0.37
TMEM258-208ENST00000545210 UNC5CLQ8IV45 518 aa17.37■□□□□ 0.37
TMEM258-208ENST00000545210 BLMP54132 1417 aaPredicted RBP17.37■□□□□ 0.37
TMEM258-208ENST00000545210 RRBP1Q9P2E9 1410 aaKnown RBP17.37■□□□□ 0.37
TMEM258-208ENST00000545210 ABCA3Q99758 1704 aa17.36■□□□□ 0.37
TMEM258-208ENST00000545210 ADGRF5Q8IZF2 1346 aa17.36■□□□□ 0.37
TMEM258-208ENST00000545210 TECPR2O15040 1411 aa17.36■□□□□ 0.37
TMEM258-208ENST00000545210 NWD2Q9ULI1 1742 aa17.35■□□□□ 0.37
TMEM258-208ENST00000545210 SPATA31A3Q5VYP0 1347 aa17.35■□□□□ 0.37
TMEM258-208ENST00000545210 PLEKHH1Q9ULM0 1364 aa17.34■□□□□ 0.37
TMEM258-208ENST00000545210 CCDC144AA2RUR9 1427 aa17.33■□□□□ 0.36
TMEM258-208ENST00000545210 DEFB132Q7Z7B7 95 aa17.33■□□□□ 0.36
TMEM258-208ENST00000545210 RGL3Q3MIN7 710 aa17.32■□□□□ 0.36
TMEM258-208ENST00000545210 TMEM132EQ6IEE7 984 aa17.32■□□□□ 0.36
TMEM258-208ENST00000545210 LRP5O75197 1615 aa17.32■□□□□ 0.36
TMEM258-208ENST00000545210 KRT28Q7Z3Y7 464 aa17.31■□□□□ 0.36
TMEM258-208ENST00000545210 ABCC11Q96J66 1382 aa17.3■□□□□ 0.36
TMEM258-208ENST00000545210 PLEKHG5O94827 1062 aa17.3■□□□□ 0.36
TMEM258-208ENST00000545210 HAP1P54257 671 aaPredicted RBP17.3■□□□□ 0.36
TMEM258-208ENST00000545210 SEPT12Q8IYM1 358 aa17.3■□□□□ 0.36
TMEM258-208ENST00000545210 SPATA31E1Q6ZUB1 1445 aa17.3■□□□□ 0.36
TMEM258-208ENST00000545210 SF3B2Q13435 895 aaKnown RBP17.29■□□□□ 0.36
TMEM258-208ENST00000545210 CABLES1Q8TDN4 633 aa17.29■□□□□ 0.36
TMEM258-208ENST00000545210 TNS3Q68CZ2 1445 aa17.29■□□□□ 0.36
TMEM258-208ENST00000545210 ANKRD30BQ9BXX2 1392 aa17.28■□□□□ 0.36
TMEM258-208ENST00000545210 PIK3C2GO75747 1445 aa17.28■□□□□ 0.36
TMEM258-208ENST00000545210 YTHDC2Q9H6S0 1430 aaKnown RBP17.28■□□□□ 0.36
TMEM258-208ENST00000545210 VPS72Q15906 364 aa17.27■□□□□ 0.36
TMEM258-208ENST00000545210 CCDC9Q9Y3X0 531 aaKnown RBP17.27■□□□□ 0.36
TMEM258-208ENST00000545210 NRAPQ86VF7 1730 aa17.27■□□□□ 0.35
TMEM258-208ENST00000545210 PSME1Q06323 249 aa17.25■□□□□ 0.35
TMEM258-208ENST00000545210 PHF8Q9UPP1 1060 aa17.25■□□□□ 0.35
TMEM258-208ENST00000545210 ONECUT3O60422 494 aaPredicted RBP17.24■□□□□ 0.35
TMEM258-208ENST00000545210 LMOD2Q6P5Q4 547 aa17.24■□□□□ 0.35
TMEM258-208ENST00000545210 KRT27Q7Z3Y8 459 aa17.24■□□□□ 0.35
TMEM258-208ENST00000545210 RGPD1P0DJD0 1748 aa17.24■□□□□ 0.35
TMEM258-208ENST00000545210 NRXN1Q9ULB1 1477 aa17.24■□□□□ 0.35
TMEM258-208ENST00000545210 TRPM3Q9HCF6 1732 aaPredicted RBP17.23■□□□□ 0.35
TMEM258-208ENST00000545210 SBNO1A3KN83 1393 aa17.21■□□□□ 0.35
TMEM258-208ENST00000545210 ARHGEF10O15013 1369 aa17.21■□□□□ 0.35
TMEM258-208ENST00000545210 A0A0G2JS52 829 aa17.21■□□□□ 0.35
TMEM258-208ENST00000545210 PSDA5PKW4 1024 aaPredicted RBP17.21■□□□□ 0.35
TMEM258-208ENST00000545210 FAM83GA6ND36 823 aa17.21■□□□□ 0.35
TMEM258-208ENST00000545210 MYT1Q01538 1121 aa17.21■□□□□ 0.35
TMEM258-208ENST00000545210 COL14A1Q05707 1796 aaKnown RBP17.2■□□□□ 0.34
TMEM258-208ENST00000545210 ALS2Q96Q42 1657 aa17.2■□□□□ 0.34
TMEM258-208ENST00000545210 SIRT1Q96EB6 747 aa17.2■□□□□ 0.34
TMEM258-208ENST00000545210 SAFB2Q14151 953 aaKnown RBP eCLIP17.19■□□□□ 0.34
TMEM258-208ENST00000545210 TNS1Q9HBL0 1735 aaKnown RBP17.18■□□□□ 0.34
TMEM258-208ENST00000545210 CRYBG1Q9Y4K1 1723 aa17.18■□□□□ 0.34
TMEM258-208ENST00000545210 BAG6P46379 1132 aa17.18■□□□□ 0.34
TMEM258-208ENST00000545210 FAM98CQ17RN3 349 aaKnown RBP17.18■□□□□ 0.34
TMEM258-208ENST00000545210 PMFBP1Q8TBY8 1022 aa17.18■□□□□ 0.34
TMEM258-208ENST00000545210 MPHOSPH9Q99550 1183 aa17.18■□□□□ 0.34
TMEM258-208ENST00000545210 C14orf93Q9H972 538 aaKnown RBP17.18■□□□□ 0.34
TMEM258-208ENST00000545210 DHX57Q6P158 1386 aaKnown RBP17.17■□□□□ 0.34
TMEM258-208ENST00000545210 HRCP23327 699 aa17.17■□□□□ 0.34
TMEM258-208ENST00000545210 PRAM1Q96QH2 718 aa17.17■□□□□ 0.34
TMEM258-208ENST00000545210 ADGRB2O60241 1585 aa17.16■□□□□ 0.34
TMEM258-208ENST00000545210 CFAP70Q5T0N1 1121 aa17.16■□□□□ 0.34
TMEM258-208ENST00000545210 BTG4Q9NY30 223 aa17.16■□□□□ 0.34
TMEM258-208ENST00000545210 ANKARQ7Z5J8 1434 aa17.14■□□□□ 0.33
TMEM258-208ENST00000545210 THSD7AQ9UPZ6 1657 aa17.14■□□□□ 0.33
TMEM258-208ENST00000545210 FAM182BQ5T319 152 aa17.14■□□□□ 0.33
TMEM258-208ENST00000545210 DLC1Q96QB1 1528 aa17.13■□□□□ 0.33
TMEM258-208ENST00000545210 EN1Q05925 392 aaPredicted RBP17.13■□□□□ 0.33
TMEM258-208ENST00000545210 POGKQ9P215 609 aa17.12■□□□□ 0.33
TMEM258-208ENST00000545210 R3HDM1Q15032 1099 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms