RNA–Protein interactions for RNA: ENST00000544396.5

GRAMD2B-219, Transcript of GRAM domain containing 2B, humanhuman

TSL 2 BASIC

Gene GRAMD2B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-219ENST00000544396 POLR3AO14802 1390 aaPredicted RBP23.96■■□□□ 1.43
GRAMD2B-219ENST00000544396 TRAK2O60296 914 aa23.96■■□□□ 1.43
GRAMD2B-219ENST00000544396 C22orf23Q9BZE7 217 aa23.96■■□□□ 1.43
GRAMD2B-219ENST00000544396 ADGRF5Q8IZF2 1346 aa23.96■■□□□ 1.43
GRAMD2B-219ENST00000544396 A0A0U1RQG5 324 aaPredicted RBP23.95■■□□□ 1.42
GRAMD2B-219ENST00000544396 TRAPPC8Q9Y2L5 1435 aa23.94■■□□□ 1.42
GRAMD2B-219ENST00000544396 AFAP1Q8N556 730 aa23.93■■□□□ 1.42
GRAMD2B-219ENST00000544396 KDM5AP29375 1690 aaKnown RBP23.92■■□□□ 1.42
GRAMD2B-219ENST00000544396 SLC12A5Q9H2X9 1139 aa23.92■■□□□ 1.42
GRAMD2B-219ENST00000544396 CHMP5Q9NZZ3 219 aa23.92■■□□□ 1.42
GRAMD2B-219ENST00000544396 PHF23Q9BUL5 403 aaPredicted RBP23.92■■□□□ 1.42
GRAMD2B-219ENST00000544396 MVPQ14764 893 aaKnown RBP23.91■■□□□ 1.42
GRAMD2B-219ENST00000544396 CLTCL1P53675 1640 aa23.9■■□□□ 1.42
GRAMD2B-219ENST00000544396 SPHKAPQ2M3C7 1700 aa23.9■■□□□ 1.42
GRAMD2B-219ENST00000544396 RTEL1-TNFRSF6BF6WH68 1400 aa23.89■■□□□ 1.42
GRAMD2B-219ENST00000544396 MTHFSP49914 203 aa23.89■■□□□ 1.42
GRAMD2B-219ENST00000544396 WDR63Q8IWG1 891 aa23.89■■□□□ 1.41
GRAMD2B-219ENST00000544396 CEP152O94986 1710 aa23.89■■□□□ 1.41
GRAMD2B-219ENST00000544396 NSD3Q9BZ95 1437 aa23.89■■□□□ 1.41
GRAMD2B-219ENST00000544396 TRPM2O94759 1503 aa23.89■■□□□ 1.41
GRAMD2B-219ENST00000544396 AAMPQ13685 434 aa23.88■■□□□ 1.41
GRAMD2B-219ENST00000544396 EFCAB2Q5VUJ9 269 aa23.88■■□□□ 1.41
GRAMD2B-219ENST00000544396 TSR2Q969E8 191 aaKnown RBP23.88■■□□□ 1.41
GRAMD2B-219ENST00000544396 PTPRTO14522 1441 aa23.88■■□□□ 1.41
GRAMD2B-219ENST00000544396 FTSJ3Q8IY81 847 aaKnown RBP23.88■■□□□ 1.41
GRAMD2B-219ENST00000544396 STAC3Q96MF2 364 aa23.88■■□□□ 1.41
GRAMD2B-219ENST00000544396 SPAG9O60271 1321 aaKnown RBP23.87■■□□□ 1.41
GRAMD2B-219ENST00000544396 DZIP1LQ8IYY4 767 aaKnown RBP23.86■■□□□ 1.41
GRAMD2B-219ENST00000544396 ZKSCAN2Q63HK3 967 aa23.85■■□□□ 1.41
GRAMD2B-219ENST00000544396 ZNF692Q9BU19 519 aaPredicted RBP23.85■■□□□ 1.41
GRAMD2B-219ENST00000544396 ZMYM3Q14202 1370 aa23.85■■□□□ 1.41
GRAMD2B-219ENST00000544396 TRAK1Q9UPV9 953 aa23.84■■□□□ 1.41
GRAMD2B-219ENST00000544396 RBM10P98175 930 aaKnown RBP23.83■■□□□ 1.41
GRAMD2B-219ENST00000544396 IQSEC2Q5JU85 1478 aa23.83■■□□□ 1.41
GRAMD2B-219ENST00000544396 UGGT1Q9NYU2 1555 aa23.83■■□□□ 1.4
GRAMD2B-219ENST00000544396 MRE11P49959 708 aa23.82■■□□□ 1.4
GRAMD2B-219ENST00000544396 GRPEL1Q9HAV7 217 aa23.82■■□□□ 1.4
GRAMD2B-219ENST00000544396 HSCBQ8IWL3 235 aa23.82■■□□□ 1.4
GRAMD2B-219ENST00000544396 PLCH2O75038 1416 aa23.81■■□□□ 1.4
GRAMD2B-219ENST00000544396 ERBB4Q15303 1308 aa23.81■■□□□ 1.4
GRAMD2B-219ENST00000544396 U2AF1L5P0DN76 240 aaPredicted RBP23.81■■□□□ 1.4
GRAMD2B-219ENST00000544396 U2AF1Q01081 240 aaKnown RBP eCLIP23.81■■□□□ 1.4
GRAMD2B-219ENST00000544396 MYH16Q9H6N6 1097 aa23.81■■□□□ 1.4
GRAMD2B-219ENST00000544396 SHPRHQ149N8 1683 aa23.81■■□□□ 1.4
GRAMD2B-219ENST00000544396 ITPRIPQ8IWB1 547 aa23.81■■□□□ 1.4
GRAMD2B-219ENST00000544396 TRIM27P14373 513 aa23.8■■□□□ 1.4
GRAMD2B-219ENST00000544396 SMC4Q9NTJ3 1288 aa23.8■■□□□ 1.4
GRAMD2B-219ENST00000544396 KIF3BO15066 747 aa23.8■■□□□ 1.4
GRAMD2B-219ENST00000544396 EXOSC9Q06265 439 aaKnown RBP23.79■■□□□ 1.4
GRAMD2B-219ENST00000544396 GAS2L3Q86XJ1 694 aa23.78■■□□□ 1.4
GRAMD2B-219ENST00000544396 SLC24A1O60721 1099 aa23.78■■□□□ 1.4
GRAMD2B-219ENST00000544396 CCDC27Q2M243 656 aa23.78■■□□□ 1.4
GRAMD2B-219ENST00000544396 SSH1Q8WYL5 1049 aa23.77■■□□□ 1.4
GRAMD2B-219ENST00000544396 CHGAP10645 457 aaKnown RBP23.76■■□□□ 1.39
GRAMD2B-219ENST00000544396 TNPO1Q92973 898 aaKnown RBP23.76■■□□□ 1.39
GRAMD2B-219ENST00000544396 FOXD4L1Q9NU39 408 aa23.76■■□□□ 1.39
GRAMD2B-219ENST00000544396 TMEM132EQ6IEE7 984 aa23.75■■□□□ 1.39
GRAMD2B-219ENST00000544396 ABCA6Q8N139 1617 aa23.75■■□□□ 1.39
GRAMD2B-219ENST00000544396 HDAC1Q13547 482 aaPredicted RBP23.75■■□□□ 1.39
GRAMD2B-219ENST00000544396 CFAP53Q96M91 514 aa23.75■■□□□ 1.39
GRAMD2B-219ENST00000544396 DDX11L8A8MPP1 907 aa23.74■■□□□ 1.39
GRAMD2B-219ENST00000544396 ESPNB1AK53 854 aa23.74■■□□□ 1.39
GRAMD2B-219ENST00000544396 DDIT3P35638 169 aa23.74■■□□□ 1.39
GRAMD2B-219ENST00000544396 NOB1Q9ULX3 412 aaKnown RBP23.74■■□□□ 1.39
GRAMD2B-219ENST00000544396 KANK1Q14678 1352 aa23.73■■□□□ 1.39
GRAMD2B-219ENST00000544396 ZNF518AQ6AHZ1 1483 aa23.73■■□□□ 1.39
GRAMD2B-219ENST00000544396 TMEM57Q8N5G2 664 aa23.73■■□□□ 1.39
GRAMD2B-219ENST00000544396 LNPKQ9C0E8 428 aa23.73■■□□□ 1.39
GRAMD2B-219ENST00000544396 ABCC1P33527 1531 aa23.72■■□□□ 1.39
GRAMD2B-219ENST00000544396 SMC5Q8IY18 1101 aa23.72■■□□□ 1.39
GRAMD2B-219ENST00000544396 PDCL3Q9H2J4 239 aa23.71■■□□□ 1.39
GRAMD2B-219ENST00000544396 PRDM4Q9UKN5 801 aa23.71■■□□□ 1.39
GRAMD2B-219ENST00000544396 MAP3K4Q9Y6R4 1608 aa23.7■■□□□ 1.39
GRAMD2B-219ENST00000544396 ERCC6L2Q5T890 1561 aa23.7■■□□□ 1.39
GRAMD2B-219ENST00000544396 ATF7IPQ6VMQ6 1270 aa23.7■■□□□ 1.39
GRAMD2B-219ENST00000544396 DDX19BQ9UMR2 479 aa23.7■■□□□ 1.39
GRAMD2B-219ENST00000544396 CD2BP2O95400 341 aaKnown RBP23.69■■□□□ 1.38
GRAMD2B-219ENST00000544396 U2SURPO15042 1029 aaKnown RBP23.69■■□□□ 1.38
GRAMD2B-219ENST00000544396 HSP90AB1P08238 724 aaKnown RBP23.69■■□□□ 1.38
GRAMD2B-219ENST00000544396 KIAA1210Q9ULL0 1709 aa23.68■■□□□ 1.38
GRAMD2B-219ENST00000544396 RBM25P49756 843 aaKnown RBP23.68■■□□□ 1.38
GRAMD2B-219ENST00000544396 NCOA3Q9Y6Q9 1424 aa23.67■■□□□ 1.38
GRAMD2B-219ENST00000544396 ZBTB40Q9NUA8 1239 aa23.67■■□□□ 1.38
GRAMD2B-219ENST00000544396 TRIM35Q9UPQ4 493 aa23.67■■□□□ 1.38
GRAMD2B-219ENST00000544396 SBNO2Q9Y2G9 1366 aa23.67■■□□□ 1.38
GRAMD2B-219ENST00000544396 NOS1P29475 1434 aa23.66■■□□□ 1.38
GRAMD2B-219ENST00000544396 CALD1Q05682 793 aaKnown RBP23.66■■□□□ 1.38
GRAMD2B-219ENST00000544396 MYOM2P54296 1465 aa23.66■■□□□ 1.38
GRAMD2B-219ENST00000544396 TRIM44Q96DX7 344 aaPredicted RBP23.65■■□□□ 1.38
GRAMD2B-219ENST00000544396 RBM42Q9BTD8 480 aaKnown RBP23.65■■□□□ 1.38
GRAMD2B-219ENST00000544396 ZFYVE16Q7Z3T8 1539 aa23.65■■□□□ 1.38
GRAMD2B-219ENST00000544396 TMPOP42166 694 aaKnown RBP23.65■■□□□ 1.38
GRAMD2B-219ENST00000544396 SNX21Q969T3 373 aa23.65■■□□□ 1.38
GRAMD2B-219ENST00000544396 KIF2CQ99661 725 aa23.65■■□□□ 1.38
GRAMD2B-219ENST00000544396 NUCB1Q02818 461 aa23.64■■□□□ 1.38
GRAMD2B-219ENST00000544396 TET3O43151 1660 aa23.64■■□□□ 1.37
GRAMD2B-219ENST00000544396 TPM2P07951 284 aa23.64■■□□□ 1.37
GRAMD2B-219ENST00000544396 RAB3GAP1Q15042 981 aa23.63■■□□□ 1.37
GRAMD2B-219ENST00000544396 CD109Q6YHK3 1445 aa23.63■■□□□ 1.37
GRAMD2B-219ENST00000544396 NUTM2DQ5VT03 806 aaPredicted RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms