RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 STK26Q9P289 416 aa19.97■□□□□ 0.79
CHFR-223ENST00000544268 SBNO2Q9Y2G9 1366 aa19.96■□□□□ 0.79
CHFR-223ENST00000544268 ARHGEF28Q8N1W1 1705 aaKnown RBP19.96■□□□□ 0.79
CHFR-223ENST00000544268 CDCA8Q53HL2 280 aa19.96■□□□□ 0.79
CHFR-223ENST00000544268 KTN1Q86UP2 1357 aaKnown RBP19.95■□□□□ 0.78
CHFR-223ENST00000544268 PARD3Q8TEW0 1356 aa19.95■□□□□ 0.78
CHFR-223ENST00000544268 QRICH2Q9H0J4 1663 aa19.95■□□□□ 0.78
CHFR-223ENST00000544268 NBR1Q14596 966 aa19.95■□□□□ 0.78
CHFR-223ENST00000544268 PTPRMP28827 1452 aa19.95■□□□□ 0.78
CHFR-223ENST00000544268 ADAMTSL3P82987 1691 aa19.94■□□□□ 0.78
CHFR-223ENST00000544268 CDCA7LQ96GN5 454 aa19.94■□□□□ 0.78
CHFR-223ENST00000544268 YTHDC2Q9H6S0 1430 aaKnown RBP19.94■□□□□ 0.78
CHFR-223ENST00000544268 NRXN3Q9Y4C0 1643 aa19.93■□□□□ 0.78
CHFR-223ENST00000544268 NLRP13Q86W25 1043 aa19.93■□□□□ 0.78
CHFR-223ENST00000544268 HDGFP51858 240 aaKnown RBP19.93■□□□□ 0.78
CHFR-223ENST00000544268 SETD1AO15047 1707 aaKnown RBP19.92■□□□□ 0.78
CHFR-223ENST00000544268 RNF123Q5XPI4 1314 aa19.92■□□□□ 0.78
CHFR-223ENST00000544268 PKNOX2Q96KN3 472 aa19.91■□□□□ 0.78
CHFR-223ENST00000544268 LTKP29376 864 aa19.9■□□□□ 0.78
CHFR-223ENST00000544268 SAFB2Q14151 953 aaKnown RBP eCLIP19.9■□□□□ 0.78
CHFR-223ENST00000544268 MYOM1P52179 1685 aa19.9■□□□□ 0.78
CHFR-223ENST00000544268 PAK3O75914 559 aaPredicted RBP19.9■□□□□ 0.78
CHFR-223ENST00000544268 METP08581 1390 aa19.87■□□□□ 0.77
CHFR-223ENST00000544268 TXNDC2Q86VQ3 553 aa19.87■□□□□ 0.77
CHFR-223ENST00000544268 PRAM1Q96QH2 718 aa19.87■□□□□ 0.77
CHFR-223ENST00000544268 RTL5Q5HYW3 569 aaPredicted RBP19.86■□□□□ 0.77
CHFR-223ENST00000544268 SLIT1O75093 1534 aa19.86■□□□□ 0.77
CHFR-223ENST00000544268 ARHGAP23Q9P227 1491 aa19.85■□□□□ 0.77
CHFR-223ENST00000544268 THEMISQ8N1K5 641 aaPredicted RBP19.85■□□□□ 0.77
CHFR-223ENST00000544268 TULP4Q9NRJ4 1543 aa19.85■□□□□ 0.77
CHFR-223ENST00000544268 POGKQ9P215 609 aa19.84■□□□□ 0.77
CHFR-223ENST00000544268 PLEKHG1Q9ULL1 1385 aa19.84■□□□□ 0.77
CHFR-223ENST00000544268 EID1Q9Y6B2 187 aa19.84■□□□□ 0.77
CHFR-223ENST00000544268 CEP170BQ9Y4F5 1589 aaPredicted RBP19.83■□□□□ 0.77
CHFR-223ENST00000544268 EXOC6Q8TAG9 804 aa19.83■□□□□ 0.77
CHFR-223ENST00000544268 ADAMTS13Q76LX8 1427 aa19.83■□□□□ 0.76
CHFR-223ENST00000544268 EVC2Q86UK5 1308 aa19.83■□□□□ 0.76
CHFR-223ENST00000544268 ABCC11Q96J66 1382 aa19.82■□□□□ 0.76
CHFR-223ENST00000544268 MINK1Q8N4C8 1332 aaPredicted RBP19.82■□□□□ 0.76
CHFR-223ENST00000544268 PLIN1O60240 522 aa19.82■□□□□ 0.76
CHFR-223ENST00000544268 DLC1Q96QB1 1528 aa19.81■□□□□ 0.76
CHFR-223ENST00000544268 RRP1P56182 461 aaKnown RBP19.81■□□□□ 0.76
CHFR-223ENST00000544268 WAPLQ7Z5K2 1190 aa19.81■□□□□ 0.76
CHFR-223ENST00000544268 RCAN3Q9UKA8 241 aa19.81■□□□□ 0.76
CHFR-223ENST00000544268 IL27Q8NEV9 243 aa19.8■□□□□ 0.76
CHFR-223ENST00000544268 PODXL2Q9NZ53 605 aa19.8■□□□□ 0.76
CHFR-223ENST00000544268 ADAMTS8Q9UP79 889 aa19.8■□□□□ 0.76
CHFR-223ENST00000544268 KNSTRNQ9Y448 316 aa19.8■□□□□ 0.76
CHFR-223ENST00000544268 PLEKHH1Q9ULM0 1364 aa19.79■□□□□ 0.76
CHFR-223ENST00000544268 IPO9Q96P70 1041 aaKnown RBP19.79■□□□□ 0.76
CHFR-223ENST00000544268 CABP2Q9NPB3 220 aa19.79■□□□□ 0.76
CHFR-223ENST00000544268 SLC26A8Q96RN1 970 aa19.78■□□□□ 0.76
CHFR-223ENST00000544268 SLC12A5Q9H2X9 1139 aa19.77■□□□□ 0.76
CHFR-223ENST00000544268 SETD1BQ9UPS6 1966 aaKnown RBP19.77■□□□□ 0.76
CHFR-223ENST00000544268 MED14O60244 1454 aa19.77■□□□□ 0.75
CHFR-223ENST00000544268 AMER1Q5JTC6 1135 aaPredicted RBP19.76■□□□□ 0.75
CHFR-223ENST00000544268 CARD14Q9BXL6 1004 aa19.76■□□□□ 0.75
CHFR-223ENST00000544268 PUS7Q96PZ0 661 aaKnown RBP19.76■□□□□ 0.75
CHFR-223ENST00000544268 ANP32AP39687 249 aaKnown RBP19.75■□□□□ 0.75
CHFR-223ENST00000544268 ZNF142P52746 1687 aaPredicted RBP19.75■□□□□ 0.75
CHFR-223ENST00000544268 PPP2R1AP30153 589 aa19.75■□□□□ 0.75
CHFR-223ENST00000544268 SRPK2P78362 688 aaKnown RBP19.75■□□□□ 0.75
CHFR-223ENST00000544268 KNDC1Q76NI1 1749 aa19.75■□□□□ 0.75
CHFR-223ENST00000544268 TECPR2O15040 1411 aa19.74■□□□□ 0.75
CHFR-223ENST00000544268 SKAP1Q86WV1 359 aa19.74■□□□□ 0.75
CHFR-223ENST00000544268 ZBTB47Q9UFB7 747 aaPredicted RBP19.73■□□□□ 0.75
CHFR-223ENST00000544268 CPS1P31327 1500 aa19.72■□□□□ 0.75
CHFR-223ENST00000544268 CDK19Q9BWU1 502 aa19.72■□□□□ 0.75
CHFR-223ENST00000544268 BLMP54132 1417 aaPredicted RBP19.72■□□□□ 0.75
CHFR-223ENST00000544268 ROBO2Q9HCK4 1378 aa19.71■□□□□ 0.75
CHFR-223ENST00000544268 FAM135BQ49AJ0 1406 aa19.71■□□□□ 0.75
CHFR-223ENST00000544268 PTPRUQ92729 1446 aa19.71■□□□□ 0.75
CHFR-223ENST00000544268 TBX22Q9Y458 520 aa19.71■□□□□ 0.75
CHFR-223ENST00000544268 SIRT1Q96EB6 747 aa19.7■□□□□ 0.74
CHFR-223ENST00000544268 CCDC146Q8IYE0 955 aa19.69■□□□□ 0.74
CHFR-223ENST00000544268 NPC1L1Q9UHC9 1359 aa19.69■□□□□ 0.74
CHFR-223ENST00000544268 C20orf194Q5TEA3 1177 aa19.68■□□□□ 0.74
CHFR-223ENST00000544268 NSD3Q9BZ95 1437 aa19.68■□□□□ 0.74
CHFR-223ENST00000544268 ATAD2Q6PL18 1390 aa19.68■□□□□ 0.74
CHFR-223ENST00000544268 RTN4Q9NQC3 1192 aaKnown RBP19.68■□□□□ 0.74
CHFR-223ENST00000544268 ANKLE2Q86XL3 938 aa19.67■□□□□ 0.74
CHFR-223ENST00000544268 DIP2AQ14689 1571 aa19.67■□□□□ 0.74
CHFR-223ENST00000544268 ANKRD36BQ8N2N9 1353 aa19.67■□□□□ 0.74
CHFR-223ENST00000544268 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.66■□□□□ 0.74
CHFR-223ENST00000544268 PDE3BQ13370 1112 aa19.66■□□□□ 0.74
CHFR-223ENST00000544268 AMOTL2Q9Y2J4 779 aa19.66■□□□□ 0.74
CHFR-223ENST00000544268 NINLQ9Y2I6 1382 aa19.65■□□□□ 0.74
CHFR-223ENST00000544268 WASLO00401 505 aaPredicted RBP19.64■□□□□ 0.74
CHFR-223ENST00000544268 WDR43Q15061 677 aaKnown RBP eCLIP19.64■□□□□ 0.73
CHFR-223ENST00000544268 CRBNQ96SW2 442 aa19.64■□□□□ 0.73
CHFR-223ENST00000544268 A0A1W2PP64 1363 aa19.63■□□□□ 0.73
CHFR-223ENST00000544268 USP35Q9P2H5 1018 aa19.63■□□□□ 0.73
CHFR-223ENST00000544268 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.62■□□□□ 0.73
CHFR-223ENST00000544268 CABP1Q9NZU7 370 aa19.62■□□□□ 0.73
CHFR-223ENST00000544268 CD163L1Q9NR16 1453 aa19.62■□□□□ 0.73
CHFR-223ENST00000544268 KDM4FA0A1W2PPD8 638 aa19.61■□□□□ 0.73
CHFR-223ENST00000544268 SPINK5Q9NQ38 1064 aaPredicted RBP19.61■□□□□ 0.73
CHFR-223ENST00000544268 USP32Q8NFA0 1604 aa19.6■□□□□ 0.73
CHFR-223ENST00000544268 PTCH1Q13635 1447 aa19.59■□□□□ 0.73
CHFR-223ENST00000544268 TNNT2P45379 298 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms