RNA–Protein interactions for RNA: ENST00000543566.5

ARL6IP4-220, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARL6IP4, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARL6IP4-220ENST00000543566 PTCH1Q13635 1447 aa28.72■■■□□ 2.19
ARL6IP4-220ENST00000543566 EVC2Q86UK5 1308 aa28.71■■■□□ 2.19
ARL6IP4-220ENST00000543566 ROBO2Q9HCK4 1378 aa28.71■■■□□ 2.19
ARL6IP4-220ENST00000543566 PUS7Q96PZ0 661 aaKnown RBP28.71■■■□□ 2.19
ARL6IP4-220ENST00000543566 PLEKHH1Q9ULM0 1364 aa28.7■■■□□ 2.19
ARL6IP4-220ENST00000543566 AMOTL2Q9Y2J4 779 aa28.7■■■□□ 2.18
ARL6IP4-220ENST00000543566 PANK3Q9H999 370 aa28.69■■■□□ 2.18
ARL6IP4-220ENST00000543566 CHD2O14647 1828 aaKnown RBP28.69■■■□□ 2.18
ARL6IP4-220ENST00000543566 WAPLQ7Z5K2 1190 aa28.67■■■□□ 2.18
ARL6IP4-220ENST00000543566 SAFB2Q14151 953 aaKnown RBP eCLIP28.67■■■□□ 2.18
ARL6IP4-220ENST00000543566 KTN1Q86UP2 1357 aaKnown RBP28.66■■■□□ 2.18
ARL6IP4-220ENST00000543566 PER1O15534 1290 aaPredicted RBP28.66■■■□□ 2.18
ARL6IP4-220ENST00000543566 STRCQ7RTU9 1775 aa28.66■■■□□ 2.18
ARL6IP4-220ENST00000543566 NWD1Q149M9 1564 aa28.63■■■□□ 2.17
ARL6IP4-220ENST00000543566 MINK1Q8N4C8 1332 aaPredicted RBP28.62■■■□□ 2.17
ARL6IP4-220ENST00000543566 KCNA6P17658 529 aa28.6■■■□□ 2.17
ARL6IP4-220ENST00000543566 ADGRB2O60241 1585 aa28.6■■■□□ 2.17
ARL6IP4-220ENST00000543566 AEBP2Q6ZN18 517 aaPredicted RBP28.59■■■□□ 2.17
ARL6IP4-220ENST00000543566 YTHDC1Q96MU7 727 aaKnown RBP28.59■■■□□ 2.17
ARL6IP4-220ENST00000543566 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.58■■■□□ 2.17
ARL6IP4-220ENST00000543566 RALBP1Q15311 655 aa28.58■■■□□ 2.17
ARL6IP4-220ENST00000543566 ATAD2Q6PL18 1390 aa28.56■■■□□ 2.16
ARL6IP4-220ENST00000543566 NINLQ9Y2I6 1382 aa28.56■■■□□ 2.16
ARL6IP4-220ENST00000543566 KNSTRNQ9Y448 316 aa28.55■■■□□ 2.16
ARL6IP4-220ENST00000543566 PARD3Q8TEW0 1356 aa28.55■■■□□ 2.16
ARL6IP4-220ENST00000543566 SRPK2P78362 688 aaKnown RBP28.54■■■□□ 2.16
ARL6IP4-220ENST00000543566 CABP2Q9NPB3 220 aa28.54■■■□□ 2.16
ARL6IP4-220ENST00000543566 CNGB1Q14028 1251 aaPredicted RBP28.53■■■□□ 2.16
ARL6IP4-220ENST00000543566 TMC1Q8TDI8 760 aa28.52■■■□□ 2.16
ARL6IP4-220ENST00000543566 WASLO00401 505 aaPredicted RBP28.51■■■□□ 2.15
ARL6IP4-220ENST00000543566 CDK19Q9BWU1 502 aa28.51■■■□□ 2.15
ARL6IP4-220ENST00000543566 NPC1L1Q9UHC9 1359 aa28.51■■■□□ 2.15
ARL6IP4-220ENST00000543566 NKTRP30414 1462 aaKnown RBP28.51■■■□□ 2.15
ARL6IP4-220ENST00000543566 MYBBP1AQ9BQG0 1328 aaKnown RBP28.49■■■□□ 2.15
ARL6IP4-220ENST00000543566 USP32Q8NFA0 1604 aa28.49■■■□□ 2.15
ARL6IP4-220ENST00000543566 SLC12A5Q9H2X9 1139 aa28.49■■■□□ 2.15
ARL6IP4-220ENST00000543566 ANKRD36BQ8N2N9 1353 aa28.47■■■□□ 2.15
ARL6IP4-220ENST00000543566 AMER1Q5JTC6 1135 aaPredicted RBP28.47■■■□□ 2.15
ARL6IP4-220ENST00000543566 MRS2Q9HD23 443 aa28.47■■■□□ 2.15
ARL6IP4-220ENST00000543566 CENPBP07199 599 aaPredicted RBP28.46■■■□□ 2.15
ARL6IP4-220ENST00000543566 CC2D1BQ5T0F9 858 aaKnown RBP28.46■■■□□ 2.15
ARL6IP4-220ENST00000543566 CCDC184Q52MB2 194 aa28.45■■■□□ 2.14
ARL6IP4-220ENST00000543566 STRCP1A6NGW2 1772 aa28.45■■■□□ 2.14
ARL6IP4-220ENST00000543566 CARD14Q9BXL6 1004 aa28.44■■■□□ 2.14
ARL6IP4-220ENST00000543566 NSD3Q9BZ95 1437 aa28.44■■■□□ 2.14
ARL6IP4-220ENST00000543566 BRD4O60885 1362 aaPredicted RBP28.42■■■□□ 2.14
ARL6IP4-220ENST00000543566 NALCNQ8IZF0 1738 aa28.42■■■□□ 2.14
ARL6IP4-220ENST00000543566 ATP7BP35670 1465 aa28.41■■■□□ 2.14
ARL6IP4-220ENST00000543566 ADGRL3Q9HAR2 1447 aa28.41■■■□□ 2.14
ARL6IP4-220ENST00000543566 DMRT2Q9Y5R5 561 aa28.41■■■□□ 2.14
ARL6IP4-220ENST00000543566 CDC42BPGQ6DT37 1551 aa28.4■■■□□ 2.14
ARL6IP4-220ENST00000543566 A0A1W2PP64 1363 aa28.38■■■□□ 2.13
ARL6IP4-220ENST00000543566 NLRP13Q86W25 1043 aa28.38■■■□□ 2.13
ARL6IP4-220ENST00000543566 CD163L1Q9NR16 1453 aa28.38■■■□□ 2.13
ARL6IP4-220ENST00000543566 TERF2IPQ9NYB0 399 aa28.37■■■□□ 2.13
ARL6IP4-220ENST00000543566 NCOA3Q9Y6Q9 1424 aa28.37■■■□□ 2.13
ARL6IP4-220ENST00000543566 PRR36Q9H6K5 1346 aa28.37■■■□□ 2.13
ARL6IP4-220ENST00000543566 NUDT16Q96DE0 195 aaKnown RBP28.36■■■□□ 2.13
ARL6IP4-220ENST00000543566 TOPAZ1Q8N9V7 1692 aa28.35■■■□□ 2.13
ARL6IP4-220ENST00000543566 PROSER2Q86WR7 435 aaPredicted RBP28.35■■■□□ 2.13
ARL6IP4-220ENST00000543566 FMN2Q9NZ56 1722 aa28.34■■■□□ 2.13
ARL6IP4-220ENST00000543566 CCDC61Q9Y6R9 512 aa28.34■■■□□ 2.13
ARL6IP4-220ENST00000543566 ANKARQ7Z5J8 1434 aa28.34■■■□□ 2.13
ARL6IP4-220ENST00000543566 NSD2O96028 1365 aa28.33■■■□□ 2.13
ARL6IP4-220ENST00000543566 PPIP5K1Q6PFW1 1433 aa28.33■■■□□ 2.13
ARL6IP4-220ENST00000543566 HDGFL2Q7Z4V5 671 aaPredicted RBP28.33■■■□□ 2.12
ARL6IP4-220ENST00000543566 CABP1Q9NZU7 370 aa28.33■■■□□ 2.12
ARL6IP4-220ENST00000543566 CGNL1Q0VF96 1302 aa28.32■■■□□ 2.12
ARL6IP4-220ENST00000543566 RBM33Q96EV2 1170 aaKnown RBP28.32■■■□□ 2.12
ARL6IP4-220ENST00000543566 ITSN1Q15811 1721 aa28.3■■■□□ 2.12
ARL6IP4-220ENST00000543566 TMEM94Q12767 1356 aa28.3■■■□□ 2.12
ARL6IP4-220ENST00000543566 ZNF335Q9H4Z2 1342 aaPredicted RBP28.29■■■□□ 2.12
ARL6IP4-220ENST00000543566 CPSF1Q10570 1443 aaKnown RBP28.28■■■□□ 2.12
ARL6IP4-220ENST00000543566 AKAP12Q02952 1782 aa28.28■■■□□ 2.12
ARL6IP4-220ENST00000543566 ANKRD26Q9UPS8 1709 aa28.27■■■□□ 2.12
ARL6IP4-220ENST00000543566 PPP2R1AP30153 589 aa28.27■■■□□ 2.12
ARL6IP4-220ENST00000543566 FAM9BQ8IZU0 186 aa28.27■■■□□ 2.12
ARL6IP4-220ENST00000543566 LRRC7Q96NW7 1537 aa28.26■■■□□ 2.12
ARL6IP4-220ENST00000543566 KIF20BQ96Q89 1820 aa28.26■■■□□ 2.11
ARL6IP4-220ENST00000543566 MON2Q7Z3U7 1717 aa28.26■■■□□ 2.11
ARL6IP4-220ENST00000543566 PLEKHG3A1L390 1219 aa28.25■■■□□ 2.11
ARL6IP4-220ENST00000543566 DCCP43146 1447 aa28.25■■■□□ 2.11
ARL6IP4-220ENST00000543566 C19orf44Q9H6X5 657 aa28.24■■■□□ 2.11
ARL6IP4-220ENST00000543566 PNISRQ8TF01 805 aaKnown RBP28.24■■■□□ 2.11
ARL6IP4-220ENST00000543566 XIRP1Q702N8 1843 aaKnown RBP28.23■■■□□ 2.11
ARL6IP4-220ENST00000543566 C14orf37Q86TY3 774 aa28.22■■■□□ 2.11
ARL6IP4-220ENST00000543566 NUTM2FA1L443 756 aa28.21■■■□□ 2.11
ARL6IP4-220ENST00000543566 MORC1Q86VD1 984 aa28.21■■■□□ 2.11
ARL6IP4-220ENST00000543566 EDC4Q6P2E9 1401 aaKnown RBP28.2■■■□□ 2.11
ARL6IP4-220ENST00000543566 RGPD8O14715 1765 aaPredicted RBP28.2■■■□□ 2.11
ARL6IP4-220ENST00000543566 POLR3AO14802 1390 aaPredicted RBP28.19■■■□□ 2.1
ARL6IP4-220ENST00000543566 ZNF692Q9BU19 519 aaPredicted RBP28.16■■■□□ 2.1
ARL6IP4-220ENST00000543566 HNRNPUQ00839 825 aaKnown RBP eCLIP28.16■■■□□ 2.1
ARL6IP4-220ENST00000543566 ACEP12821 1306 aa28.15■■■□□ 2.1
ARL6IP4-220ENST00000543566 NRKQ7Z2Y5 1582 aa28.15■■■□□ 2.1
ARL6IP4-220ENST00000543566 MSH6P52701 1360 aa28.13■■■□□ 2.09
ARL6IP4-220ENST00000543566 LTBP4Q8N2S1 1624 aa28.13■■■□□ 2.09
ARL6IP4-220ENST00000543566 MST1RQ04912 1400 aa28.13■■■□□ 2.09
ARL6IP4-220ENST00000543566 FYB1O15117 783 aa28.12■■■□□ 2.09
ARL6IP4-220ENST00000543566 C1orf167Q5SNV9 1468 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms