RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 LAMC1P11047 1609 aa22.17■■□□□ 1.14
ITM2C-208ENST00000541852 SPATA31E1Q6ZUB1 1445 aa22.16■■□□□ 1.14
ITM2C-208ENST00000541852 NPHP3Q7Z494 1330 aa22.16■■□□□ 1.14
ITM2C-208ENST00000541852 ESCO1Q5FWF5 840 aa22.16■■□□□ 1.14
ITM2C-208ENST00000541852 UPF1Q92900 1129 aaKnown RBP eCLIP22.16■■□□□ 1.14
ITM2C-208ENST00000541852 LRPPRCP42704 1394 aaKnown RBP22.15■■□□□ 1.14
ITM2C-208ENST00000541852 ABCC11Q96J66 1382 aa22.15■■□□□ 1.14
ITM2C-208ENST00000541852 SIRT1Q96EB6 747 aa22.15■■□□□ 1.14
ITM2C-208ENST00000541852 STK26Q9P289 416 aa22.14■■□□□ 1.13
ITM2C-208ENST00000541852 ADAMTS2O95450 1211 aa22.12■■□□□ 1.13
ITM2C-208ENST00000541852 TECPR2O15040 1411 aa22.12■■□□□ 1.13
ITM2C-208ENST00000541852 WAPLQ7Z5K2 1190 aa22.1■■□□□ 1.13
ITM2C-208ENST00000541852 CDC42BPGQ6DT37 1551 aa22.09■■□□□ 1.13
ITM2C-208ENST00000541852 TMEM132EQ6IEE7 984 aa22.09■■□□□ 1.13
ITM2C-208ENST00000541852 FNBP4Q8N3X1 1017 aaPredicted RBP22.09■■□□□ 1.13
ITM2C-208ENST00000541852 C14orf93Q9H972 538 aaKnown RBP22.09■■□□□ 1.13
ITM2C-208ENST00000541852 FOXO3O43524 673 aa22.08■■□□□ 1.13
ITM2C-208ENST00000541852 USP21Q9UK80 565 aa22.08■■□□□ 1.13
ITM2C-208ENST00000541852 TRPC5Q9UL62 973 aaPredicted RBP22.08■■□□□ 1.13
ITM2C-208ENST00000541852 PIK3C2GO75747 1445 aa22.07■■□□□ 1.12
ITM2C-208ENST00000541852 DHX57Q6P158 1386 aaKnown RBP22.06■■□□□ 1.12
ITM2C-208ENST00000541852 YTHDC2Q9H6S0 1430 aaKnown RBP22.05■■□□□ 1.12
ITM2C-208ENST00000541852 IFT172Q9UG01 1749 aa22.04■■□□□ 1.12
ITM2C-208ENST00000541852 STAC3Q96MF2 364 aa22.02■■□□□ 1.12
ITM2C-208ENST00000541852 COL22A1Q8NFW1 1626 aaPredicted RBP22.02■■□□□ 1.11
ITM2C-208ENST00000541852 NUTM2FA1L443 756 aa22.01■■□□□ 1.11
ITM2C-208ENST00000541852 KNDC1Q76NI1 1749 aa22■■□□□ 1.11
ITM2C-208ENST00000541852 PSME1Q06323 249 aa22■■□□□ 1.11
ITM2C-208ENST00000541852 PXDNQ92626 1479 aa21.99■■□□□ 1.11
ITM2C-208ENST00000541852 CFAP70Q5T0N1 1121 aa21.99■■□□□ 1.11
ITM2C-208ENST00000541852 HRCP23327 699 aa21.98■■□□□ 1.11
ITM2C-208ENST00000541852 PLEKHH1Q9ULM0 1364 aa21.98■■□□□ 1.11
ITM2C-208ENST00000541852 RGS12O14924 1447 aa21.97■■□□□ 1.11
ITM2C-208ENST00000541852 MYOM2P54296 1465 aa21.97■■□□□ 1.11
ITM2C-208ENST00000541852 NRXN1Q9ULB1 1477 aa21.97■■□□□ 1.11
ITM2C-208ENST00000541852 XPCQ01831 940 aaPredicted RBP21.97■■□□□ 1.11
ITM2C-208ENST00000541852 KRT28Q7Z3Y7 464 aa21.97■■□□□ 1.11
ITM2C-208ENST00000541852 SPATA31A3Q5VYP0 1347 aa21.96■■□□□ 1.11
ITM2C-208ENST00000541852 POGKQ9P215 609 aa21.95■■□□□ 1.1
ITM2C-208ENST00000541852 PHF8Q9UPP1 1060 aa21.95■■□□□ 1.1
ITM2C-208ENST00000541852 ATAD2Q6PL18 1390 aa21.95■■□□□ 1.1
ITM2C-208ENST00000541852 RAB3GAP2Q9H2M9 1393 aa21.95■■□□□ 1.1
ITM2C-208ENST00000541852 ATRNO75882 1429 aa21.95■■□□□ 1.1
ITM2C-208ENST00000541852 KIF1AQ12756 1690 aa21.93■■□□□ 1.1
ITM2C-208ENST00000541852 PRAM1Q96QH2 718 aa21.93■■□□□ 1.1
ITM2C-208ENST00000541852 FMN2Q9NZ56 1722 aa21.92■■□□□ 1.1
ITM2C-208ENST00000541852 CCDC125Q86Z20 511 aa21.92■■□□□ 1.1
ITM2C-208ENST00000541852 GJD4Q96KN9 370 aaPredicted RBP21.92■■□□□ 1.1
ITM2C-208ENST00000541852 UNC5CLQ8IV45 518 aa21.91■■□□□ 1.1
ITM2C-208ENST00000541852 BCL9LQ86UU0 1499 aa21.9■■□□□ 1.1
ITM2C-208ENST00000541852 HAP1P54257 671 aaPredicted RBP21.89■■□□□ 1.09
ITM2C-208ENST00000541852 MARF1Q9Y4F3 1742 aaKnown RBP21.89■■□□□ 1.09
ITM2C-208ENST00000541852 SBNO1A3KN83 1393 aa21.88■■□□□ 1.09
ITM2C-208ENST00000541852 DLC1Q96QB1 1528 aa21.88■■□□□ 1.09
ITM2C-208ENST00000541852 SAFB2Q14151 953 aaKnown RBP eCLIP21.87■■□□□ 1.09
ITM2C-208ENST00000541852 DCAF11Q8TEB1 546 aa21.87■■□□□ 1.09
ITM2C-208ENST00000541852 ANKARQ7Z5J8 1434 aa21.86■■□□□ 1.09
ITM2C-208ENST00000541852 ARHGEF10O15013 1369 aa21.86■■□□□ 1.09
ITM2C-208ENST00000541852 EIF3AQ14152 1382 aaKnown RBP21.86■■□□□ 1.09
ITM2C-208ENST00000541852 KDM2AQ9Y2K7 1162 aa21.85■■□□□ 1.09
ITM2C-208ENST00000541852 TNS3Q68CZ2 1445 aa21.84■■□□□ 1.09
ITM2C-208ENST00000541852 TRAK1Q9UPV9 953 aa21.84■■□□□ 1.09
ITM2C-208ENST00000541852 LMOD2Q6P5Q4 547 aa21.83■■□□□ 1.09
ITM2C-208ENST00000541852 SLIT2O94813 1529 aa21.82■■□□□ 1.08
ITM2C-208ENST00000541852 RGPD8O14715 1765 aaPredicted RBP21.82■■□□□ 1.08
ITM2C-208ENST00000541852 GPRASP1Q5JY77 1395 aa21.8■■□□□ 1.08
ITM2C-208ENST00000541852 PMFBP1Q8TBY8 1022 aa21.8■■□□□ 1.08
ITM2C-208ENST00000541852 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.8■■□□□ 1.08
ITM2C-208ENST00000541852 WASLO00401 505 aaPredicted RBP21.79■■□□□ 1.08
ITM2C-208ENST00000541852 VPS72Q15906 364 aa21.79■■□□□ 1.08
ITM2C-208ENST00000541852 ADGRB1O14514 1584 aa21.78■■□□□ 1.08
ITM2C-208ENST00000541852 CABLES1Q8TDN4 633 aa21.78■■□□□ 1.08
ITM2C-208ENST00000541852 ZRANB1Q9UGI0 708 aa21.77■■□□□ 1.08
ITM2C-208ENST00000541852 ADGRB2O60241 1585 aa21.77■■□□□ 1.08
ITM2C-208ENST00000541852 MINK1Q8N4C8 1332 aaPredicted RBP21.77■■□□□ 1.07
ITM2C-208ENST00000541852 USP32Q8NFA0 1604 aa21.77■■□□□ 1.07
ITM2C-208ENST00000541852 ONECUT3O60422 494 aaPredicted RBP21.76■■□□□ 1.07
ITM2C-208ENST00000541852 HIRIP3Q9BW71 556 aaPredicted RBP21.76■■□□□ 1.07
ITM2C-208ENST00000541852 RALGAPBQ86X10 1494 aa21.76■■□□□ 1.07
ITM2C-208ENST00000541852 NGDNQ8NEJ9 315 aaKnown RBP21.75■■□□□ 1.07
ITM2C-208ENST00000541852 EP400Q96L91 3159 aa21.75■■□□□ 1.07
ITM2C-208ENST00000541852 CCDC9Q9Y3X0 531 aaKnown RBP21.74■■□□□ 1.07
ITM2C-208ENST00000541852 FAM83GA6ND36 823 aa21.73■■□□□ 1.07
ITM2C-208ENST00000541852 SEPT12Q8IYM1 358 aa21.72■■□□□ 1.07
ITM2C-208ENST00000541852 SF3B2Q13435 895 aaKnown RBP21.71■■□□□ 1.07
ITM2C-208ENST00000541852 NWD2Q9ULI1 1742 aa21.71■■□□□ 1.07
ITM2C-208ENST00000541852 TULP4Q9NRJ4 1543 aa21.7■■□□□ 1.07
ITM2C-208ENST00000541852 PLEKHG5O94827 1062 aa21.7■■□□□ 1.06
ITM2C-208ENST00000541852 GLI3P10071 1580 aa21.7■■□□□ 1.06
ITM2C-208ENST00000541852 PRR36Q9H6K5 1346 aa21.69■■□□□ 1.06
ITM2C-208ENST00000541852 BLMP54132 1417 aaPredicted RBP21.69■■□□□ 1.06
ITM2C-208ENST00000541852 PAK3O75914 559 aaPredicted RBP21.68■■□□□ 1.06
ITM2C-208ENST00000541852 NUDT16Q96DE0 195 aaKnown RBP21.68■■□□□ 1.06
ITM2C-208ENST00000541852 KRT27Q7Z3Y8 459 aa21.67■■□□□ 1.06
ITM2C-208ENST00000541852 BTG4Q9NY30 223 aa21.67■■□□□ 1.06
ITM2C-208ENST00000541852 CDK19Q9BWU1 502 aa21.65■■□□□ 1.06
ITM2C-208ENST00000541852 CCDC61Q9Y6R9 512 aa21.65■■□□□ 1.06
ITM2C-208ENST00000541852 TRPM3Q9HCF6 1732 aaPredicted RBP21.63■■□□□ 1.05
ITM2C-208ENST00000541852 SRCAPQ6ZRS2 3230 aa21.63■■□□□ 1.05
ITM2C-208ENST00000541852 PLCH1Q4KWH8 1693 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms