RNA–Protein interactions for RNA: ENST00000540162.5

MRPL48-209, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 5

Gene MRPL48, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-209ENST00000540162 NUTM2FA1L443 756 aa17.45■□□□□ 0.38
MRPL48-209ENST00000540162 NPHP3Q7Z494 1330 aa17.45■□□□□ 0.38
MRPL48-209ENST00000540162 FOXD1Q16676 465 aa17.44■□□□□ 0.38
MRPL48-209ENST00000540162 WAPLQ7Z5K2 1190 aa17.44■□□□□ 0.38
MRPL48-209ENST00000540162 ATRNO75882 1429 aa17.44■□□□□ 0.38
MRPL48-209ENST00000540162 PRAG1Q86YV5 1406 aa17.44■□□□□ 0.38
MRPL48-209ENST00000540162 SRCAPQ6ZRS2 3230 aa17.43■□□□□ 0.38
MRPL48-209ENST00000540162 RRBP1Q9P2E9 1410 aaKnown RBP17.43■□□□□ 0.38
MRPL48-209ENST00000540162 ADGRF5Q8IZF2 1346 aa17.43■□□□□ 0.38
MRPL48-209ENST00000540162 LAMC1P11047 1609 aa17.43■□□□□ 0.38
MRPL48-209ENST00000540162 RGL3Q3MIN7 710 aa17.42■□□□□ 0.38
MRPL48-209ENST00000540162 ZRANB1Q9UGI0 708 aa17.42■□□□□ 0.38
MRPL48-209ENST00000540162 GJD4Q96KN9 370 aaPredicted RBP17.41■□□□□ 0.38
MRPL48-209ENST00000540162 BCL9LQ86UU0 1499 aa17.41■□□□□ 0.38
MRPL48-209ENST00000540162 MYOM2P54296 1465 aa17.4■□□□□ 0.38
MRPL48-209ENST00000540162 TMEM132EQ6IEE7 984 aa17.4■□□□□ 0.38
MRPL48-209ENST00000540162 CCDC125Q86Z20 511 aa17.39■□□□□ 0.37
MRPL48-209ENST00000540162 KIF1BO60333 1816 aa17.39■□□□□ 0.37
MRPL48-209ENST00000540162 PXDNQ92626 1479 aa17.38■□□□□ 0.37
MRPL48-209ENST00000540162 LRPPRCP42704 1394 aaKnown RBP17.38■□□□□ 0.37
MRPL48-209ENST00000540162 UNC5CLQ8IV45 518 aa17.36■□□□□ 0.37
MRPL48-209ENST00000540162 PLEKHH1Q9ULM0 1364 aa17.36■□□□□ 0.37
MRPL48-209ENST00000540162 KRT28Q7Z3Y7 464 aa17.35■□□□□ 0.37
MRPL48-209ENST00000540162 COL22A1Q8NFW1 1626 aaPredicted RBP17.35■□□□□ 0.37
MRPL48-209ENST00000540162 SPATA31A3Q5VYP0 1347 aa17.34■□□□□ 0.37
MRPL48-209ENST00000540162 ABCC11Q96J66 1382 aa17.34■□□□□ 0.37
MRPL48-209ENST00000540162 CDC42BPGQ6DT37 1551 aa17.33■□□□□ 0.37
MRPL48-209ENST00000540162 CCDC144AA2RUR9 1427 aa17.32■□□□□ 0.36
MRPL48-209ENST00000540162 PLEKHG5O94827 1062 aa17.32■□□□□ 0.36
MRPL48-209ENST00000540162 MPHOSPH9Q99550 1183 aa17.32■□□□□ 0.36
MRPL48-209ENST00000540162 TECPR2O15040 1411 aa17.31■□□□□ 0.36
MRPL48-209ENST00000540162 ANKRD30BQ9BXX2 1392 aa17.31■□□□□ 0.36
MRPL48-209ENST00000540162 SPATA31E1Q6ZUB1 1445 aa17.3■□□□□ 0.36
MRPL48-209ENST00000540162 CABLES1Q8TDN4 633 aa17.3■□□□□ 0.36
MRPL48-209ENST00000540162 PPLO60437 1756 aa17.3■□□□□ 0.36
MRPL48-209ENST00000540162 HAP1P54257 671 aaPredicted RBP17.29■□□□□ 0.36
MRPL48-209ENST00000540162 SIRT1Q96EB6 747 aa17.29■□□□□ 0.36
MRPL48-209ENST00000540162 RALGAPBQ86X10 1494 aa17.29■□□□□ 0.36
MRPL48-209ENST00000540162 EP400Q96L91 3159 aa17.29■□□□□ 0.36
MRPL48-209ENST00000540162 SLIT2O94813 1529 aa17.28■□□□□ 0.36
MRPL48-209ENST00000540162 PSME1Q06323 249 aa17.28■□□□□ 0.36
MRPL48-209ENST00000540162 DEFB132Q7Z7B7 95 aa17.28■□□□□ 0.36
MRPL48-209ENST00000540162 SEPT12Q8IYM1 358 aa17.28■□□□□ 0.36
MRPL48-209ENST00000540162 PHF8Q9UPP1 1060 aa17.28■□□□□ 0.36
MRPL48-209ENST00000540162 YTHDC2Q9H6S0 1430 aaKnown RBP17.28■□□□□ 0.36
MRPL48-209ENST00000540162 LMOD2Q6P5Q4 547 aa17.27■□□□□ 0.36
MRPL48-209ENST00000540162 C14orf93Q9H972 538 aaKnown RBP17.27■□□□□ 0.36
MRPL48-209ENST00000540162 VPS72Q15906 364 aa17.26■□□□□ 0.35
MRPL48-209ENST00000540162 CFAP70Q5T0N1 1121 aa17.26■□□□□ 0.35
MRPL48-209ENST00000540162 CCDC9Q9Y3X0 531 aaKnown RBP17.26■□□□□ 0.35
MRPL48-209ENST00000540162 PIK3C2GO75747 1445 aa17.25■□□□□ 0.35
MRPL48-209ENST00000540162 BLMP54132 1417 aaPredicted RBP17.25■□□□□ 0.35
MRPL48-209ENST00000540162 SAFB2Q14151 953 aaKnown RBP eCLIP17.25■□□□□ 0.35
MRPL48-209ENST00000540162 ONECUT3O60422 494 aaPredicted RBP17.24■□□□□ 0.35
MRPL48-209ENST00000540162 SF3B2Q13435 895 aaKnown RBP17.24■□□□□ 0.35
MRPL48-209ENST00000540162 GLI3P10071 1580 aa17.23■□□□□ 0.35
MRPL48-209ENST00000540162 FAM83GA6ND36 823 aa17.23■□□□□ 0.35
MRPL48-209ENST00000540162 PRAM1Q96QH2 718 aa17.23■□□□□ 0.35
MRPL48-209ENST00000540162 PMFBP1Q8TBY8 1022 aa17.22■□□□□ 0.35
MRPL48-209ENST00000540162 DHX57Q6P158 1386 aaKnown RBP17.22■□□□□ 0.35
MRPL48-209ENST00000540162 TNS3Q68CZ2 1445 aa17.21■□□□□ 0.35
MRPL48-209ENST00000540162 KRT27Q7Z3Y8 459 aa17.21■□□□□ 0.35
MRPL48-209ENST00000540162 SBNO1A3KN83 1393 aa17.2■□□□□ 0.34
MRPL48-209ENST00000540162 POGKQ9P215 609 aa17.2■□□□□ 0.34
MRPL48-209ENST00000540162 MARF1Q9Y4F3 1742 aaKnown RBP17.19■□□□□ 0.34
MRPL48-209ENST00000540162 FMN2Q9NZ56 1722 aa17.18■□□□□ 0.34
MRPL48-209ENST00000540162 A0A0G2JS52 829 aa17.18■□□□□ 0.34
MRPL48-209ENST00000540162 MYT1Q01538 1121 aa17.18■□□□□ 0.34
MRPL48-209ENST00000540162 USP32Q8NFA0 1604 aa17.18■□□□□ 0.34
MRPL48-209ENST00000540162 ARHGEF10O15013 1369 aa17.17■□□□□ 0.34
MRPL48-209ENST00000540162 NRXN1Q9ULB1 1477 aa17.17■□□□□ 0.34
MRPL48-209ENST00000540162 KIF1AQ12756 1690 aa17.16■□□□□ 0.34
MRPL48-209ENST00000540162 FAM98CQ17RN3 349 aaKnown RBP17.16■□□□□ 0.34
MRPL48-209ENST00000540162 BTG4Q9NY30 223 aa17.16■□□□□ 0.34
MRPL48-209ENST00000540162 KNDC1Q76NI1 1749 aa17.16■□□□□ 0.34
MRPL48-209ENST00000540162 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.16■□□□□ 0.34
MRPL48-209ENST00000540162 HIRIP3Q9BW71 556 aaPredicted RBP17.15■□□□□ 0.34
MRPL48-209ENST00000540162 PSDA5PKW4 1024 aaPredicted RBP17.14■□□□□ 0.33
MRPL48-209ENST00000540162 TRAK1Q9UPV9 953 aa17.14■□□□□ 0.33
MRPL48-209ENST00000540162 IFT172Q9UG01 1749 aa17.13■□□□□ 0.33
MRPL48-209ENST00000540162 BAG6P46379 1132 aa17.13■□□□□ 0.33
MRPL48-209ENST00000540162 ANKARQ7Z5J8 1434 aa17.12■□□□□ 0.33
MRPL48-209ENST00000540162 FAM182BQ5T319 152 aa17.11■□□□□ 0.33
MRPL48-209ENST00000540162 MINK1Q8N4C8 1332 aaPredicted RBP17.11■□□□□ 0.33
MRPL48-209ENST00000540162 EN1Q05925 392 aaPredicted RBP17.1■□□□□ 0.33
MRPL48-209ENST00000540162 KDM2AQ9Y2K7 1162 aa17.1■□□□□ 0.33
MRPL48-209ENST00000540162 PRR36Q9H6K5 1346 aa17.1■□□□□ 0.33
MRPL48-209ENST00000540162 ACIN1Q9UKV3 1341 aaKnown RBP17.1■□□□□ 0.33
MRPL48-209ENST00000540162 GPRASP1Q5JY77 1395 aa17.1■□□□□ 0.33
MRPL48-209ENST00000540162 HRCP23327 699 aa17.09■□□□□ 0.33
MRPL48-209ENST00000540162 BRWD3Q6RI45 1802 aa17.09■□□□□ 0.33
MRPL48-209ENST00000540162 WASLO00401 505 aaPredicted RBP17.08■□□□□ 0.32
MRPL48-209ENST00000540162 PAK3O75914 559 aaPredicted RBP17.08■□□□□ 0.32
MRPL48-209ENST00000540162 NGDNQ8NEJ9 315 aaKnown RBP17.08■□□□□ 0.32
MRPL48-209ENST00000540162 SPATA31A5Q5VU36 1347 aa17.07■□□□□ 0.32
MRPL48-209ENST00000540162 SPATA31A7Q8IWB4 1347 aa17.07■□□□□ 0.32
MRPL48-209ENST00000540162 RGPD8O14715 1765 aaPredicted RBP17.07■□□□□ 0.32
MRPL48-209ENST00000540162 DLC1Q96QB1 1528 aa17.06■□□□□ 0.32
MRPL48-209ENST00000540162 DCAF11Q8TEB1 546 aa17.06■□□□□ 0.32
MRPL48-209ENST00000540162 PLCH1Q4KWH8 1693 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms