RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 HSPA2P54652 639 aa12.17□□□□□ -0.46
DDB1-213ENST00000539332 TMF1P82094 1093 aa12.17□□□□□ -0.46
DDB1-213ENST00000539332 NPHP4O75161 1426 aaPredicted RBP12.17□□□□□ -0.46
DDB1-213ENST00000539332 ABCC11Q96J66 1382 aa12.16□□□□□ -0.46
DDB1-213ENST00000539332 NCKAP5LQ9HCH0 1330 aa12.16□□□□□ -0.46
DDB1-213ENST00000539332 DLC1Q96QB1 1528 aa12.16□□□□□ -0.46
DDB1-213ENST00000539332 CENPJQ9HC77 1338 aaPredicted RBP12.15□□□□□ -0.46
DDB1-213ENST00000539332 TECPR2O15040 1411 aa12.15□□□□□ -0.46
DDB1-213ENST00000539332 PRKRIP1Q9H875 184 aaPredicted RBP12.15□□□□□ -0.46
DDB1-213ENST00000539332 STRCQ7RTU9 1775 aa12.15□□□□□ -0.47
DDB1-213ENST00000539332 CHD2O14647 1828 aaKnown RBP12.14□□□□□ -0.47
DDB1-213ENST00000539332 CPS1P31327 1500 aa12.14□□□□□ -0.47
DDB1-213ENST00000539332 PTPRUQ92729 1446 aa12.13□□□□□ -0.47
DDB1-213ENST00000539332 XRN1Q8IZH2 1706 aaKnown RBP12.13□□□□□ -0.47
DDB1-213ENST00000539332 KTN1Q86UP2 1357 aaKnown RBP12.13□□□□□ -0.47
DDB1-213ENST00000539332 PIK3R4Q99570 1358 aa12.13□□□□□ -0.47
DDB1-213ENST00000539332 TULP4Q9NRJ4 1543 aa12.13□□□□□ -0.47
DDB1-213ENST00000539332 CDCA8Q53HL2 280 aa12.13□□□□□ -0.47
DDB1-213ENST00000539332 PRAM1Q96QH2 718 aa12.13□□□□□ -0.47
DDB1-213ENST00000539332 FAM135BQ49AJ0 1406 aa12.11□□□□□ -0.47
DDB1-213ENST00000539332 PLCB2Q00722 1185 aa12.11□□□□□ -0.47
DDB1-213ENST00000539332 SAFB2Q14151 953 aaKnown RBP eCLIP12.11□□□□□ -0.47
DDB1-213ENST00000539332 POGKQ9P215 609 aa12.11□□□□□ -0.47
DDB1-213ENST00000539332 ROBO2Q9HCK4 1378 aa12.11□□□□□ -0.47
DDB1-213ENST00000539332 PER1O15534 1290 aaPredicted RBP12.1□□□□□ -0.47
DDB1-213ENST00000539332 WAPLQ7Z5K2 1190 aa12.1□□□□□ -0.47
DDB1-213ENST00000539332 SIRT1Q96EB6 747 aa12.1□□□□□ -0.47
DDB1-213ENST00000539332 AMOTL2Q9Y2J4 779 aa12.1□□□□□ -0.47
DDB1-213ENST00000539332 POLR3GLQ9BT43 218 aa12.1□□□□□ -0.47
DDB1-213ENST00000539332 PLEKHH1Q9ULM0 1364 aa12.1□□□□□ -0.47
DDB1-213ENST00000539332 PTCH1Q13635 1447 aa12.1□□□□□ -0.47
DDB1-213ENST00000539332 USP32Q8NFA0 1604 aa12.09□□□□□ -0.47
DDB1-213ENST00000539332 PARD3Q8TEW0 1356 aa12.08□□□□□ -0.48
DDB1-213ENST00000539332 PUS7Q96PZ0 661 aaKnown RBP12.08□□□□□ -0.48
DDB1-213ENST00000539332 MINK1Q8N4C8 1332 aaPredicted RBP12.08□□□□□ -0.48
DDB1-213ENST00000539332 KCNA6P17658 529 aa12.07□□□□□ -0.48
DDB1-213ENST00000539332 SUPT16HQ9Y5B9 1047 aaKnown RBP12.07□□□□□ -0.48
DDB1-213ENST00000539332 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.07□□□□□ -0.48
DDB1-213ENST00000539332 NWD1Q149M9 1564 aa12.07□□□□□ -0.48
DDB1-213ENST00000539332 NPC1L1Q9UHC9 1359 aa12.06□□□□□ -0.48
DDB1-213ENST00000539332 EVC2Q86UK5 1308 aa12.06□□□□□ -0.48
DDB1-213ENST00000539332 ANP32EQ9BTT0 268 aa12.06□□□□□ -0.48
DDB1-213ENST00000539332 STRCP1A6NGW2 1772 aa12.05□□□□□ -0.48
DDB1-213ENST00000539332 ADGRB2O60241 1585 aa12.05□□□□□ -0.48
DDB1-213ENST00000539332 PANK3Q9H999 370 aa12.05□□□□□ -0.48
DDB1-213ENST00000539332 RALBP1Q15311 655 aa12.04□□□□□ -0.48
DDB1-213ENST00000539332 CCDC184Q52MB2 194 aa12.02□□□□□ -0.48
DDB1-213ENST00000539332 BRD4O60885 1362 aaPredicted RBP12.02□□□□□ -0.48
DDB1-213ENST00000539332 NKTRP30414 1462 aaKnown RBP12.02□□□□□ -0.49
DDB1-213ENST00000539332 NALCNQ8IZF0 1738 aa12.02□□□□□ -0.49
DDB1-213ENST00000539332 SRPK2P78362 688 aaKnown RBP12.02□□□□□ -0.49
DDB1-213ENST00000539332 CDK19Q9BWU1 502 aa12.02□□□□□ -0.49
DDB1-213ENST00000539332 CABP2Q9NPB3 220 aa12.02□□□□□ -0.49
DDB1-213ENST00000539332 NINLQ9Y2I6 1382 aa12.02□□□□□ -0.49
DDB1-213ENST00000539332 ANKRD26Q9UPS8 1709 aa12.01□□□□□ -0.49
DDB1-213ENST00000539332 MYBBP1AQ9BQG0 1328 aaKnown RBP12.01□□□□□ -0.49
DDB1-213ENST00000539332 WASLO00401 505 aaPredicted RBP12.01□□□□□ -0.49
DDB1-213ENST00000539332 DMRT2Q9Y5R5 561 aa12□□□□□ -0.49
DDB1-213ENST00000539332 ATAD2Q6PL18 1390 aa11.99□□□□□ -0.49
DDB1-213ENST00000539332 RBM33Q96EV2 1170 aaKnown RBP11.99□□□□□ -0.49
DDB1-213ENST00000539332 TOPAZ1Q8N9V7 1692 aa11.99□□□□□ -0.49
DDB1-213ENST00000539332 PROSER2Q86WR7 435 aaPredicted RBP11.98□□□□□ -0.49
DDB1-213ENST00000539332 KLHL34Q8N239 644 aa11.98□□□□□ -0.49
DDB1-213ENST00000539332 MRS2Q9HD23 443 aa11.98□□□□□ -0.49
DDB1-213ENST00000539332 TSHZ2Q9NRE2 1034 aa11.98□□□□□ -0.49
DDB1-213ENST00000539332 RGPD8O14715 1765 aaPredicted RBP11.98□□□□□ -0.49
DDB1-213ENST00000539332 AKAP12Q02952 1782 aa11.98□□□□□ -0.49
DDB1-213ENST00000539332 ADGRL3Q9HAR2 1447 aa11.98□□□□□ -0.49
DDB1-213ENST00000539332 CDC42BPGQ6DT37 1551 aa11.98□□□□□ -0.49
DDB1-213ENST00000539332 FMN2Q9NZ56 1722 aa11.98□□□□□ -0.49
DDB1-213ENST00000539332 ANKRD36BQ8N2N9 1353 aa11.98□□□□□ -0.49
DDB1-213ENST00000539332 TMC1Q8TDI8 760 aa11.97□□□□□ -0.49
DDB1-213ENST00000539332 SLC12A5Q9H2X9 1139 aa11.97□□□□□ -0.49
DDB1-213ENST00000539332 KIF20BQ96Q89 1820 aa11.97□□□□□ -0.49
DDB1-213ENST00000539332 ATP7BP35670 1465 aa11.97□□□□□ -0.49
DDB1-213ENST00000539332 XIRP1Q702N8 1843 aaKnown RBP11.97□□□□□ -0.49
DDB1-213ENST00000539332 NLRP13Q86W25 1043 aa11.97□□□□□ -0.49
DDB1-213ENST00000539332 PODXL2Q9NZ53 605 aa11.97□□□□□ -0.49
DDB1-213ENST00000539332 CD163L1Q9NR16 1453 aa11.97□□□□□ -0.49
DDB1-213ENST00000539332 ZNF335Q9H4Z2 1342 aaPredicted RBP11.96□□□□□ -0.49
DDB1-213ENST00000539332 MON2Q7Z3U7 1717 aa11.96□□□□□ -0.49
DDB1-213ENST00000539332 CARD14Q9BXL6 1004 aa11.96□□□□□ -0.49
DDB1-213ENST00000539332 KNSTRNQ9Y448 316 aa11.96□□□□□ -0.49
DDB1-213ENST00000539332 ITSN1Q15811 1721 aa11.96□□□□□ -0.5
DDB1-213ENST00000539332 HAP1P54257 671 aaPredicted RBP11.95□□□□□ -0.5
DDB1-213ENST00000539332 NUDT16Q96DE0 195 aaKnown RBP11.95□□□□□ -0.5
DDB1-213ENST00000539332 PRR36Q9H6K5 1346 aa11.95□□□□□ -0.5
DDB1-213ENST00000539332 INSRP06213 1382 aa11.95□□□□□ -0.5
DDB1-213ENST00000539332 TMEM94Q12767 1356 aa11.95□□□□□ -0.5
DDB1-213ENST00000539332 NSD3Q9BZ95 1437 aa11.95□□□□□ -0.5
DDB1-213ENST00000539332 C14orf37Q86TY3 774 aa11.95□□□□□ -0.5
DDB1-213ENST00000539332 CCDC61Q9Y6R9 512 aa11.95□□□□□ -0.5
DDB1-213ENST00000539332 NCOA3Q9Y6Q9 1424 aa11.94□□□□□ -0.5
DDB1-213ENST00000539332 CABP1Q9NZU7 370 aa11.94□□□□□ -0.5
DDB1-213ENST00000539332 PPIP5K1Q6PFW1 1433 aa11.93□□□□□ -0.5
DDB1-213ENST00000539332 LRRC7Q96NW7 1537 aa11.93□□□□□ -0.5
DDB1-213ENST00000539332 NUTM2FA1L443 756 aa11.93□□□□□ -0.5
DDB1-213ENST00000539332 PNISRQ8TF01 805 aaKnown RBP11.93□□□□□ -0.5
DDB1-213ENST00000539332 NSD2O96028 1365 aa11.93□□□□□ -0.5
DDB1-213ENST00000539332 ANKARQ7Z5J8 1434 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms