RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 KNDC1Q76NI1 1749 aa27.38■■□□□ 1.97
DDX55-205ENST00000538744 ANKRD36BQ8N2N9 1353 aa27.37■■□□□ 1.97
DDX55-205ENST00000538744 ABCC11Q96J66 1382 aa27.37■■□□□ 1.97
DDX55-205ENST00000538744 BLMP54132 1417 aaPredicted RBP27.37■■□□□ 1.97
DDX55-205ENST00000538744 CABP2Q9NPB3 220 aa27.37■■□□□ 1.97
DDX55-205ENST00000538744 SMG6Q86US8 1419 aaKnown RBP27.37■■□□□ 1.97
DDX55-205ENST00000538744 MINK1Q8N4C8 1332 aaPredicted RBP27.36■■□□□ 1.97
DDX55-205ENST00000538744 ATAD2Q6PL18 1390 aa27.36■■□□□ 1.97
DDX55-205ENST00000538744 CEBPAP49715 358 aaPredicted RBP27.35■■□□□ 1.97
DDX55-205ENST00000538744 SRPK2P78362 688 aaKnown RBP27.35■■□□□ 1.97
DDX55-205ENST00000538744 METP08581 1390 aa27.31■■□□□ 1.96
DDX55-205ENST00000538744 CGNL1Q0VF96 1302 aa27.3■■□□□ 1.96
DDX55-205ENST00000538744 CPS1P31327 1500 aa27.29■■□□□ 1.96
DDX55-205ENST00000538744 NUDCQ9Y266 331 aa27.29■■□□□ 1.96
DDX55-205ENST00000538744 NSD2O96028 1365 aa27.28■■□□□ 1.96
DDX55-205ENST00000538744 WDR43Q15061 677 aaKnown RBP eCLIP27.28■■□□□ 1.96
DDX55-205ENST00000538744 TECPR2O15040 1411 aa27.28■■□□□ 1.96
DDX55-205ENST00000538744 PLEKHG1Q9ULL1 1385 aa27.28■■□□□ 1.96
DDX55-205ENST00000538744 SLIT1O75093 1534 aa27.28■■□□□ 1.96
DDX55-205ENST00000538744 DNAJC5Q9H3Z4 198 aa27.27■■□□□ 1.96
DDX55-205ENST00000538744 BCANQ96GW7 911 aa27.27■■□□□ 1.96
DDX55-205ENST00000538744 FAM135BQ49AJ0 1406 aa27.26■■□□□ 1.95
DDX55-205ENST00000538744 MORC1Q86VD1 984 aa27.26■■□□□ 1.95
DDX55-205ENST00000538744 CDK19Q9BWU1 502 aa27.26■■□□□ 1.95
DDX55-205ENST00000538744 PLEKHH1Q9ULM0 1364 aa27.26■■□□□ 1.95
DDX55-205ENST00000538744 ARHGAP23Q9P227 1491 aa27.26■■□□□ 1.95
DDX55-205ENST00000538744 A0A1W2PP64 1363 aa27.25■■□□□ 1.95
DDX55-205ENST00000538744 ADAMTS13Q76LX8 1427 aa27.25■■□□□ 1.95
DDX55-205ENST00000538744 WAPLQ7Z5K2 1190 aa27.24■■□□□ 1.95
DDX55-205ENST00000538744 SIRT1Q96EB6 747 aa27.24■■□□□ 1.95
DDX55-205ENST00000538744 SENP3-EIF4A1A0A087X0R7 540 aa27.24■■□□□ 1.95
DDX55-205ENST00000538744 ADAMTS8Q9UP79 889 aa27.24■■□□□ 1.95
DDX55-205ENST00000538744 TERF2IPQ9NYB0 399 aa27.23■■□□□ 1.95
DDX55-205ENST00000538744 RIMS1Q86UR5 1692 aaKnown RBP27.23■■□□□ 1.95
DDX55-205ENST00000538744 EID1Q9Y6B2 187 aa27.22■■□□□ 1.95
DDX55-205ENST00000538744 LTKP29376 864 aa27.21■■□□□ 1.95
DDX55-205ENST00000538744 CD163L1Q9NR16 1453 aa27.21■■□□□ 1.95
DDX55-205ENST00000538744 PDE3BQ13370 1112 aa27.21■■□□□ 1.95
DDX55-205ENST00000538744 PLPPR3Q6T4P5 718 aa27.21■■□□□ 1.95
DDX55-205ENST00000538744 TXNDC2Q86VQ3 553 aa27.21■■□□□ 1.95
DDX55-205ENST00000538744 ANKRD26Q9UPS8 1709 aa27.21■■□□□ 1.95
DDX55-205ENST00000538744 POLR3AO14802 1390 aaPredicted RBP27.2■■□□□ 1.95
DDX55-205ENST00000538744 MED14O60244 1454 aa27.19■■□□□ 1.94
DDX55-205ENST00000538744 THEMISQ8N1K5 641 aaPredicted RBP27.17■■□□□ 1.94
DDX55-205ENST00000538744 HDGFL2Q7Z4V5 671 aaPredicted RBP27.16■■□□□ 1.94
DDX55-205ENST00000538744 ATP7BP35670 1465 aa27.16■■□□□ 1.94
DDX55-205ENST00000538744 KIF20BQ96Q89 1820 aa27.15■■□□□ 1.94
DDX55-205ENST00000538744 SALL2Q9Y467 1007 aaPredicted RBP27.15■■□□□ 1.94
DDX55-205ENST00000538744 CEP170BQ9Y4F5 1589 aaPredicted RBP27.15■■□□□ 1.94
DDX55-205ENST00000538744 ADAMTSL3P82987 1691 aa27.14■■□□□ 1.94
DDX55-205ENST00000538744 DIP2AQ14689 1571 aa27.14■■□□□ 1.94
DDX55-205ENST00000538744 SHPRHQ149N8 1683 aa27.14■■□□□ 1.94
DDX55-205ENST00000538744 WASLO00401 505 aaPredicted RBP27.13■■□□□ 1.93
DDX55-205ENST00000538744 ERICH6BQ5W0A0 696 aa27.13■■□□□ 1.93
DDX55-205ENST00000538744 PELP1Q8IZL8 1130 aaKnown RBP27.12■■□□□ 1.93
DDX55-205ENST00000538744 CABP1Q9NZU7 370 aa27.12■■□□□ 1.93
DDX55-205ENST00000538744 ADGRB2O60241 1585 aa27.12■■□□□ 1.93
DDX55-205ENST00000538744 TNNT2P45379 298 aaPredicted RBP27.11■■□□□ 1.93
DDX55-205ENST00000538744 ROBO2Q9HCK4 1378 aa27.11■■□□□ 1.93
DDX55-205ENST00000538744 IRX6P78412 446 aaPredicted RBP27.09■■□□□ 1.93
DDX55-205ENST00000538744 ZNF142P52746 1687 aaPredicted RBP27.08■■□□□ 1.93
DDX55-205ENST00000538744 CFAP53Q96M91 514 aa27.07■■□□□ 1.92
DDX55-205ENST00000538744 TBX22Q9Y458 520 aa27.07■■□□□ 1.92
DDX55-205ENST00000538744 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.06■■□□□ 1.92
DDX55-205ENST00000538744 RNF123Q5XPI4 1314 aa27.06■■□□□ 1.92
DDX55-205ENST00000538744 PPIP5K1Q6PFW1 1433 aa27.06■■□□□ 1.92
DDX55-205ENST00000538744 SLC26A8Q96RN1 970 aa27.06■■□□□ 1.92
DDX55-205ENST00000538744 PTPRUQ92729 1446 aa27.05■■□□□ 1.92
DDX55-205ENST00000538744 MTHFSP49914 203 aa27.05■■□□□ 1.92
DDX55-205ENST00000538744 CDC42BPGQ6DT37 1551 aa27.05■■□□□ 1.92
DDX55-205ENST00000538744 FYB1O15117 783 aa27.04■■□□□ 1.92
DDX55-205ENST00000538744 GGNBP2Q9H3C7 697 aa27.04■■□□□ 1.92
DDX55-205ENST00000538744 ITSN1Q15811 1721 aa27.04■■□□□ 1.92
DDX55-205ENST00000538744 NUDT16Q96DE0 195 aaKnown RBP27.02■■□□□ 1.92
DDX55-205ENST00000538744 CPSF1Q10570 1443 aaKnown RBP27.02■■□□□ 1.92
DDX55-205ENST00000538744 MON2Q7Z3U7 1717 aa27.02■■□□□ 1.92
DDX55-205ENST00000538744 AKAP12Q02952 1782 aa27.02■■□□□ 1.92
DDX55-205ENST00000538744 PTCH1Q13635 1447 aa27.01■■□□□ 1.91
DDX55-205ENST00000538744 CCDC146Q8IYE0 955 aa27.01■■□□□ 1.91
DDX55-205ENST00000538744 CDCA7LQ96GN5 454 aa27.01■■□□□ 1.91
DDX55-205ENST00000538744 EDC4Q6P2E9 1401 aaKnown RBP27■■□□□ 1.91
DDX55-205ENST00000538744 XRN1Q8IZH2 1706 aaKnown RBP26.99■■□□□ 1.91
DDX55-205ENST00000538744 NGEFQ8N5V2 710 aa26.99■■□□□ 1.91
DDX55-205ENST00000538744 CCDC61Q9Y6R9 512 aa26.99■■□□□ 1.91
DDX55-205ENST00000538744 ZNF521Q96K83 1311 aa26.98■■□□□ 1.91
DDX55-205ENST00000538744 TOPAZ1Q8N9V7 1692 aa26.98■■□□□ 1.91
DDX55-205ENST00000538744 AMOTL2Q9Y2J4 779 aa26.98■■□□□ 1.91
DDX55-205ENST00000538744 SETD1BQ9UPS6 1966 aaKnown RBP26.96■■□□□ 1.91
DDX55-205ENST00000538744 APAF1O14727 1248 aa26.96■■□□□ 1.91
DDX55-205ENST00000538744 RCAN3Q9UKA8 241 aa26.96■■□□□ 1.91
DDX55-205ENST00000538744 PPP4R2Q9NY27 417 aa26.95■■□□□ 1.9
DDX55-205ENST00000538744 PIK3R4Q99570 1358 aa26.94■■□□□ 1.9
DDX55-205ENST00000538744 PRR36Q9H6K5 1346 aa26.93■■□□□ 1.9
DDX55-205ENST00000538744 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.93■■□□□ 1.9
DDX55-205ENST00000538744 COL3A1P02461 1466 aaPredicted RBP26.92■■□□□ 1.9
DDX55-205ENST00000538744 GOLGA2Q08379 1002 aa26.92■■□□□ 1.9
DDX55-205ENST00000538744 RUNDC1Q96C34 613 aa26.9■■□□□ 1.9
DDX55-205ENST00000538744 ZNF692Q9BU19 519 aaPredicted RBP26.9■■□□□ 1.9
DDX55-205ENST00000538744 NCKAP5LQ9HCH0 1330 aa26.89■■□□□ 1.9
DDX55-205ENST00000538744 IQSEC2Q5JU85 1478 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 191.9 ms